Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000919-TA|BGIBMGA000919-PA|IPR001214|SET
(697 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC4B3.12 |set9||histone lysine methyltransferase Set9|Schizosa... 111 3e-25
SPAC29B12.02c |set2||histone lysine methyltransferase Set2 |Schi... 38 0.005
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 36 0.025
SPCC306.04c |set1||histone lysine methyltransferase Set1|Schizos... 33 0.13
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce... 32 0.31
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 32 0.31
SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit Smc6|Schizosac... 31 0.54
SPCC1739.05 |set5||histone lysine methyltransferase Set5 |Schizo... 31 0.54
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 31 0.71
SPAC20G8.01 |cdc17||ATP-dependent DNA ligase Cdc17|Schizosacchar... 30 0.94
SPCC63.04 |mok14||alpha-1,3-glucan synthase Mok14|Schizosaccharo... 30 1.2
SPBC83.03c |tas3||RITS complex subunit 3 |Schizosaccharomyces po... 29 2.2
SPCC18.18c |fum1|SPCC290.01c|fumarate hydratase|Schizosaccharomy... 28 5.0
SPBP4H10.18c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 28 5.0
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 27 6.6
SPBC428.08c |clr4||histone H3 methyltransferase Clr4|Schizosacch... 27 6.6
SPBC16H5.15 |||conserved fungal protein|Schizosaccharomyces pomb... 27 6.6
SPAC977.17 |||MIP water channel|Schizosaccharomyces pombe|chr 1|... 27 8.8
SPAC23H3.10 |ssr2||SWI/SNF and RSC complex subunit Ssr2|Schizosa... 27 8.8
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 27 8.8
>SPCC4B3.12 |set9||histone lysine methyltransferase
Set9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 441
Score = 111 bits (267), Expect = 3e-25
Identities = 77/249 (30%), Positives = 126/249 (50%), Gaps = 9/249 (3%)
Query: 28 SEYDDLATALIVDP-YLGITTHKMN-IRYRPLKTNKE-ELKNIIKEFIHTQ-DYNKAYSK 83
S +DD+ T L+VD + HK+ + R ++ + + NII ++I Q D ++A
Sbjct: 12 SLFDDVCTCLLVDKVFYWSQIHKVRKLVDRSIERMESCSIINIITKYIIEQTDLDQAAKN 71
Query: 84 LAN-GEWIPRHFSKNKHQQTKFRDHIYRYLRIFDKKAGFVIEPCYRYSLEGRVGAKISST 142
+ E P + F H+ YL ++ F I +Y + A + +
Sbjct: 72 ILQFRELDPLLRRLSSTSLLAFTRHLKYYLSLYLPSCKFEICSTNQYFSSSKPEACVIAR 131
Query: 143 KKFFKHERIDFLVGCIAEMTEEEEKQLLHPGKNDFSVMYSCRKNCAQLWLGPAAYINHDC 202
+ E I L G I +++ +EE+ + GK DFS+++S R + L+LGPA ++NHDC
Sbjct: 132 ESINAGEDITDLCGTIIKLSPKEERNI-GIGK-DFSILHSSRLDSMCLFLGPARFVNHDC 189
Query: 203 RPTCTFEATDRGKAFVRVLRDIEPGEEITCYYGEDFFGNSNCYCECETCERRGKGAFSVE 262
C F + + + ++R +RDI+PGEEIT +Y ++FG NC C C +CER G F +
Sbjct: 190 NANCRFNTSGK-RIWLRCVRDIKPGEEITTFYSSNYFGLENCECLCVSCERMGINGFK-K 247
Query: 263 SSHNDEQST 271
H ST
Sbjct: 248 LFHTSATST 256
>SPAC29B12.02c |set2||histone lysine methyltransferase Set2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 798
Score = 37.9 bits (84), Expect = 0.005
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Query: 195 AAYINHDCRPTCTFE---ATDRGKAFVRVLRDIEPGEEITCYYGEDFFG--NSNCYCECE 249
A + NH CRP C + D+ + + RDI GEE+T Y D +G CYC
Sbjct: 254 ARFCNHSCRPNCYVDKWMVGDKLRMGIFCKRDIIRGEELTFDYNVDRYGAQAQPCYCGEP 313
Query: 250 TC 251
C
Sbjct: 314 CC 315
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 35.5 bits (78), Expect = 0.025
Identities = 28/119 (23%), Positives = 49/119 (41%), Gaps = 2/119 (1%)
Query: 428 KIKNGSKVGSDIKYERNVNTPKEEADLPSTLEISNFDIKPDLPIVNDNEHSSDLNSFVYT 487
++++G+ +GS + E NT E+ DL + + DL E SD+N
Sbjct: 3907 ELESGTGLGSGVGAEDITNTLNEDDDLEELANEEDTANQSDLDESEARELESDMNGVTKD 3966
Query: 488 DTHLGGKNCDKKESLTETDLPIATATEDKIEIIESKSKVQKEPDEIDCTVRNENSSLKS 546
+N D +E + D + ED + K+ EP+E D + S+ +S
Sbjct: 3967 SVVSENENSDSEEENQDLDEEVNDIPEDLSNSL--NEKLWDEPNEEDLLETEQKSNEQS 4023
>SPCC306.04c |set1||histone lysine methyltransferase
Set1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 920
Score = 33.1 bits (72), Expect = 0.13
Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 4/61 (6%)
Query: 195 AAYINHDCRPTC---TFEATDRGKAFVRVLRDIEPGEEITC-YYGEDFFGNSNCYCECET 250
A +INH C P C + K + RDI GEE+T Y + C C T
Sbjct: 855 ARFINHSCAPNCIARIIRVEGKRKIVIYADRDIMHGEELTYDYKFPEEADKIPCLCGAPT 914
Query: 251 C 251
C
Sbjct: 915 C 915
>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1666
Score = 31.9 bits (69), Expect = 0.31
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 81 YSKLANGEWIPRHFSKNKHQQTKFRDHIYRYLRI-FDKKAGFVIEPCYRYSLEGRVGAK- 138
+S L N EW+ +FS + + D++ LR + V++ RYS VGA+
Sbjct: 639 HSNLLNPEWLMNYFS--RFSPDEVYDYLREMLRSNLRQNLQIVVQIATRYS--DLVGAQR 694
Query: 139 -ISSTKKFFKHERIDFLVGCIAEMTEEEE 166
I +KF E + + +G I +TE+ E
Sbjct: 695 IIEMFEKFKTFEGLYYYLGSIVNITEDPE 723
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 31.9 bits (69), Expect = 0.31
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 268 EQSTRYR--FRETDNRINRTKAKQVQKSSNVKNSDKTRISSRQNSSIVSPLSMKEMKQKG 325
EQ T Y+ FR N + + S NVKN+ K SS ++ P S+ +
Sbjct: 185 EQKTFYQHQFRPFSNLPSNKSSPVKHVSPNVKNNSKKTASSVNSNHSSIPSSITKSNISS 244
Query: 326 LTKYDAELLIAQG 338
L Y +E LI+ G
Sbjct: 245 LDVYGSEKLISSG 257
>SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit
Smc6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1140
Score = 31.1 bits (67), Expect = 0.54
Identities = 31/157 (19%), Positives = 64/157 (40%), Gaps = 5/157 (3%)
Query: 475 NEHSSDLNSFVYTDTHLGGKNCDKKESLTETDLPIATATEDKIEIIESKSKVQKEPDEID 534
+E +L S V + + GK K+E + T +I+++ + E +++D
Sbjct: 353 SEAKENLESIVTNQSDIDGKISSKEEVIGRAKGETDTTKSKFEDIVKTFDGYRSEMNDVD 412
Query: 535 C---TVRNENSSLKSGID-FRXXXXXXXXXXXXXXXXQKIEISNRSDESKREVDSGPPWL 590
++N ++ KS +D +R Q + +N S+ +RE+ +
Sbjct: 413 IQKRDIQNSINAAKSCLDVYREQLNTERARENNLGGSQIEKRANESNNLQREIADLSEQI 472
Query: 591 VDNSNKSSDCPCTPPRRGLKLT-LRVKRSPVVEEVMD 626
V+ +K +D G LT L K+ + ++ D
Sbjct: 473 VELESKRNDLHSALLEMGGNLTSLLTKKDSIANKISD 509
>SPCC1739.05 |set5||histone lysine methyltransferase Set5
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 319
Score = 31.1 bits (67), Expect = 0.54
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 198 INHDCRPTCTFEATDR-GKAFVRVLRDIEPGEEITCYY 234
+NHDC P R + V +RDIE GEEI Y
Sbjct: 103 MNHDCSPNVKHTWNPRLDQVTVHAVRDIEAGEEILTTY 140
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 30.7 bits (66), Expect = 0.71
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 487 TDTHLGGKNCDKKESLTETDLPIATATEDKIEIIESKSK--VQKEPDEIDCTVRNENSSL 544
T+T + K D E+ + + + TEDK+E ESK KE D I+ + E +
Sbjct: 454 TETDVKAKETDSIEANDKDEKTDSKETEDKVEETESKEADVKAKETDSIEVDDKEEKTDS 513
Query: 545 KSGID 549
K D
Sbjct: 514 KETAD 518
>SPAC20G8.01 |cdc17||ATP-dependent DNA ligase
Cdc17|Schizosaccharomyces pombe|chr 1|||Manual
Length = 768
Score = 30.3 bits (65), Expect = 0.94
Identities = 18/59 (30%), Positives = 27/59 (45%)
Query: 262 ESSHNDEQSTRYRFRETDNRINRTKAKQVQKSSNVKNSDKTRISSRQNSSIVSPLSMKE 320
ES HN+ T + E +N I KQ S+ +SD ++ +S PL +KE
Sbjct: 73 ESKHNNHDDTGTQNVERENNIVSEAKKQKTLGSSSSSSDAVSSNNDSGASTPIPLPIKE 131
>SPCC63.04 |mok14||alpha-1,3-glucan synthase
Mok14|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1369
Score = 29.9 bits (64), Expect = 1.2
Identities = 11/27 (40%), Positives = 19/27 (70%)
Query: 93 HFSKNKHQQTKFRDHIYRYLRIFDKKA 119
H ++ + +T FR +Y+YL+I DKK+
Sbjct: 872 HDEEHHYYKTGFRKRVYKYLKIKDKKS 898
>SPBC83.03c |tas3||RITS complex subunit 3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 549
Score = 29.1 bits (62), Expect = 2.2
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 262 ESSHNDEQSTRYRFRET--DNRINRTKAKQVQKSSNVKN---SDKTRIS 305
+S H D +S YR + DNR ++K ++KSS V N D+T +S
Sbjct: 329 DSYHPDSRSDSYRSKREHYDNRDTGPRSKHLEKSSYVYNQNFEDRTHLS 377
>SPCC18.18c |fum1|SPCC290.01c|fumarate hydratase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 482
Score = 27.9 bits (59), Expect = 5.0
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 28 SEYDDLATALIVDPYLGITTH---KMNIRYRPLKTNKEELKNIIK-EFIHTQD 76
S D T + + L I TH M +R LK +EE KNIIK H QD
Sbjct: 156 SSNDTFPTVMHIASVLQIHTHLLPAMKHLHRALKGKEEEFKNIIKIGRTHMQD 208
>SPBP4H10.18c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 314
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/51 (25%), Positives = 27/51 (52%)
Query: 282 INRTKAKQVQKSSNVKNSDKTRISSRQNSSIVSPLSMKEMKQKGLTKYDAE 332
I T ++ +KSS+ + DK R+ ++ S + +P + ++ T+ D E
Sbjct: 62 IKETMEEKKKKSSSFEKRDKRRVQLKEKSPLRTPRNRTQIIDARSTRKDTE 112
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 27.5 bits (58), Expect = 6.6
Identities = 12/49 (24%), Positives = 25/49 (51%)
Query: 263 SSHNDEQSTRYRFRETDNRINRTKAKQVQKSSNVKNSDKTRISSRQNSS 311
S +DE+ + ++ D + ++K+KQ S V D+ +S +N +
Sbjct: 930 SLSDDEEKQSGKKKKKDRKKRKSKSKQESSDSGVSEDDEIPLSDARNKT 978
>SPBC428.08c |clr4||histone H3 methyltransferase
Clr4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 490
Score = 27.5 bits (58), Expect = 6.6
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Query: 178 SVMYSCRKNCAQLWLGPAAYINHD-CRPTCTFEATDRGKAFVRVLRDIEPGEEITCYYGE 236
+V+Y C C+ P + P F+ ++G VR LR G ITCY GE
Sbjct: 302 AVIYECNSFCSCSMECPNRVVQRGRTLPLEIFKTKEKGWG-VRSLRFAPAGTFITCYLGE 360
>SPBC16H5.15 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 166
Score = 27.5 bits (58), Expect = 6.6
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 267 DEQSTRYRFRETDNRINRTKAKQVQKSSNVKNS--DKTR-ISSRQNSSIVSPLSMKEMK 322
DEQ +R E + + + +Q+ K ++ DK R +SS+ ++ +P+S+KE+K
Sbjct: 63 DEQILWFRESEKRELMWKKEKEQLLKEKELRQKALDKERMVSSKPETNPKTPISLKELK 121
>SPAC977.17 |||MIP water channel|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Query: 262 ESSHNDEQSTRY-RFRETD--NRINRTKAKQVQKSSNVK 297
ES H+D +T F TD R+N TKA+Q++ + +K
Sbjct: 20 ESVHDDGPTTELDTFNTTDVPRRVNTTKARQMRPKNTLK 58
>SPAC23H3.10 |ssr2||SWI/SNF and RSC complex subunit
Ssr2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 503
Score = 27.1 bits (57), Expect = 8.8
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Query: 140 SSTKKFFKHERIDFLVGCIA-EMT---EEEEKQLLHPGKNDFSVMYSCRKNCAQLWLGPA 195
SS+++F K E + A E T EE+EK P + V ++C NC+Q W
Sbjct: 151 SSSQEFVKLEEKHYSPSLNAMEQTSPKEEDEKSDKVPRVD--KVCFTCGVNCSQTWYHNL 208
Query: 196 AYINHDCRPTC 206
+D P C
Sbjct: 209 KNKKYDICPNC 219
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 27.1 bits (57), Expect = 8.8
Identities = 22/110 (20%), Positives = 46/110 (41%), Gaps = 6/110 (5%)
Query: 497 DKKESLTETDLPIATATEDKIEIIESKSKVQKEPDEIDCTVRNENSSLKSGIDFRXXXXX 556
+KKES +++ ++++E + E S S+ ++E + ++ T + S +S D
Sbjct: 158 EKKESSSDSSSE-SSSSESESE--SSSSESEEEEEVVEKTEEKKEGSSESSSDSESSSDS 214
Query: 557 XXXXXXXXXXXQKIEISNRSDESKREVDSGP---PWLVDNSNKSSDCPCT 603
S+ DE KR+ + P + ++ S+ CT
Sbjct: 215 SSESGDSDSSSDSESESSSEDEKKRKAEPASEERPAKITKPSQDSNETCT 264
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.133 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,065,558
Number of Sequences: 5004
Number of extensions: 129218
Number of successful extensions: 320
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 310
Number of HSP's gapped (non-prelim): 21
length of query: 697
length of database: 2,362,478
effective HSP length: 78
effective length of query: 619
effective length of database: 1,972,166
effective search space: 1220770754
effective search space used: 1220770754
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 57 (27.1 bits)
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