Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000919-TA|BGIBMGA000919-PA|IPR001214|SET
(697 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16333| Best HMM Match : SET (HMM E-Value=0.0053) 185 9e-47
SB_44729| Best HMM Match : SET (HMM E-Value=0) 41 0.003
SB_17138| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.016
SB_31768| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.25
SB_9795| Best HMM Match : FF (HMM E-Value=2.3e-33) 35 0.25
SB_49178| Best HMM Match : bZIP_Maf (HMM E-Value=0.96) 34 0.34
SB_33307| Best HMM Match : NAF1 (HMM E-Value=1.5e-18) 31 2.4
SB_20121| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.4
SB_20452| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.4
SB_11863| Best HMM Match : zf-C2H2 (HMM E-Value=0) 31 3.1
SB_31112| Best HMM Match : Dynein_heavy (HMM E-Value=0) 31 4.1
SB_21585| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.5
SB_33309| Best HMM Match : zf-C2H2 (HMM E-Value=0) 30 5.5
SB_2986| Best HMM Match : Tis11B_C (HMM E-Value=6.6) 30 5.5
SB_38362| Best HMM Match : BRCT (HMM E-Value=0) 30 7.2
SB_31487| Best HMM Match : HSP9_HSP12 (HMM E-Value=7.7) 30 7.2
SB_20830| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 7.2
SB_19620| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 7.2
SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0) 30 7.2
SB_39463| Best HMM Match : U79_P34 (HMM E-Value=1.3) 29 9.6
SB_23591| Best HMM Match : PAN (HMM E-Value=5.9e-07) 29 9.6
SB_7420| Best HMM Match : Extensin_2 (HMM E-Value=0.061) 29 9.6
SB_1285| Best HMM Match : SET (HMM E-Value=0.011) 29 9.6
SB_45707| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.6
SB_43621| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.6
SB_42226| Best HMM Match : efhand (HMM E-Value=0.25) 29 9.6
SB_39408| Best HMM Match : Cadherin (HMM E-Value=0) 29 9.6
SB_32577| Best HMM Match : PH (HMM E-Value=7e-17) 29 9.6
SB_29018| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.6
SB_20225| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.6
SB_7038| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.6
>SB_16333| Best HMM Match : SET (HMM E-Value=0.0053)
Length = 483
Score = 185 bits (451), Expect = 9e-47
Identities = 91/180 (50%), Positives = 126/180 (70%), Gaps = 4/180 (2%)
Query: 25 RELSEYDDLATALIVDPYLGITTHKMNIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKL 84
R+L+E DD+A++L+VD LG TTHKM R+RPLK + +K + F++ D +KAY ++
Sbjct: 17 RQLAESDDIASSLVVDSVLGFTTHKMAARFRPLKIDATVVKRALLRFLNDGDVDKAYDEI 76
Query: 85 A--NGEWIPRHF-SKNKHQQTKFRDHIYRYLRIFDKKAGFVIEPCYRYSLEGRVGAKISS 141
G+W +F +K+K+Q F+DH+ RY+ IF + AGF I C RYS E GAK+ S
Sbjct: 77 VFNAGDWGRCYFLNKSKNQIAAFKDHMLRYIGIFHRDAGFKIHKCNRYSGESN-GAKVVS 135
Query: 142 TKKFFKHERIDFLVGCIAEMTEEEEKQLLHPGKNDFSVMYSCRKNCAQLWLGPAAYINHD 201
T + K +++ L GCIAEM+EEEEK LL G+NDFS+M+S RKN +QLWLGPAAYINH+
Sbjct: 136 TGHWAKGDKLPNLCGCIAEMSEEEEKALLRAGENDFSIMFSTRKNLSQLWLGPAAYINHE 195
Score = 150 bits (363), Expect = 4e-36
Identities = 74/147 (50%), Positives = 92/147 (62%), Gaps = 16/147 (10%)
Query: 160 EMTEEEEKQLLHPGKNDFSVMYSCRKNCAQLWLGPAAYINHDCRPTCTFEATDRGKAFVR 219
EM+EEEEK LL G+NDFS+M+S RKN +QLWLGPAAYINH C V+
Sbjct: 195 EMSEEEEKALLRAGENDFSIMFSTRKNLSQLWLGPAAYINHAC---------------VK 239
Query: 220 VLRDIEPGEEITCYYGEDFFGNSNCYCECETCERRGKGAFSVESSHNDEQSTRYRFRETD 279
VLRD+E G+EITC+YGEDFFG+ NC CEC TCERRG+G F + N ++ +Y RETD
Sbjct: 240 VLRDLEVGDEITCFYGEDFFGDDNCNCECVTCERRGEGTFKSKQKENVKKQ-KYSLRETD 298
Query: 280 NRINRTKAKQVQKSSNVKNSDKTRISS 306
R+ R + N D + S
Sbjct: 299 KRLKRLNIMKESLMDYEDNLDSPSLPS 325
>SB_44729| Best HMM Match : SET (HMM E-Value=0)
Length = 1112
Score = 41.1 bits (92), Expect = 0.003
Identities = 36/152 (23%), Positives = 70/152 (46%), Gaps = 13/152 (8%)
Query: 153 FLVGCIAEMTEEEE-KQLLHPGKNDFSV-MYSCRKNCAQLWLGP----AAYINHDCRPTC 206
F++ + E+ ++ ++ + G +D + M + K+C + GP + ++NH C P C
Sbjct: 825 FVIEYVGELIDDATCRERVKKGDDDTNYYMLTIDKDCI-IDAGPMGNLSRFMNHSCYPNC 883
Query: 207 -TFEATDRGKAFVRVL--RDIEPGEEITCYYGEDFFGN--SNCYCECETCER-RGKGAFS 260
T + T G+ V + RD+E EE+T Y D GN C+C + C G +
Sbjct: 884 ETQKWTVNGEVRVGLFTSRDVESQEELTFDYCLDCHGNEKKKCHCGSQNCSGFLGVRPKT 943
Query: 261 VESSHNDEQSTRYRFRETDNRINRTKAKQVQK 292
+ N++++ + + + KQV +
Sbjct: 944 QNAQMNEDKAKNAALKRRKRKPKKPAVKQVHE 975
>SB_17138| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 490
Score = 38.7 bits (86), Expect = 0.016
Identities = 28/110 (25%), Positives = 53/110 (48%), Gaps = 11/110 (10%)
Query: 445 VNTPKEEADLPSTLEISNFDIKPDLPIVNDNEHSSDLNSFVYTDTHLGGKNCD-----KK 499
VN+ EE DLPS L ++ D K + ++ +D NS + + + +NC K
Sbjct: 181 VNSDSEEEDLPSYLSTNSQDTK-----IRTHKRIADNNSKISCRSKVDSQNCGTPSKRTK 235
Query: 500 ESLTETDLPIATATEDKIEI-IESKSKVQKEPDEIDCTVRNENSSLKSGI 548
++ ET P + D I++ + +++ K+P + NE SS ++ +
Sbjct: 236 QTKDETSRPDSDYDYDTIDVSLSQRARATKQPQTLASDGSNEPSSKRASV 285
>SB_31768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 725
Score = 34.7 bits (76), Expect = 0.25
Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 15/118 (12%)
Query: 91 PRHFSKNKHQQTKF-RDHIYRYLRIFDKKAGFVIEPCYRYSLEGRVGAKISSTKKFFKHE 149
P + K KH + F D I +R D F+ +L+G+V ++SST
Sbjct: 249 PLTYEKQKHALSTFDSDMISGSIR--DLSTDFIYN-----TLQGKVYVQVSSTDNPHGEL 301
Query: 150 RIDFLVGCIAEMTEEEEKQLLHPGKNDFSVMYSCRKNCAQLWLGPAAYINHDCRPTCT 207
R LV E+ +Q L P K DF++ SC +N + + G +HD P CT
Sbjct: 302 RTQLLVS-----DGEQCRQKLPPQKTDFTIEGSCVENGERYFNGEVWSPSHD--PICT 352
>SB_9795| Best HMM Match : FF (HMM E-Value=2.3e-33)
Length = 693
Score = 34.7 bits (76), Expect = 0.25
Identities = 16/57 (28%), Positives = 31/57 (54%)
Query: 252 ERRGKGAFSVESSHNDEQSTRYRFRETDNRINRTKAKQVQKSSNVKNSDKTRISSRQ 308
+ R K ESSH+DE ++R R RE +N R K ++ +K ++ ++ + ++
Sbjct: 593 KERQKKEEKEESSHSDEDTSRDRNREKENDREREKEREKEKEKEERDKEREKEKEKE 649
>SB_49178| Best HMM Match : bZIP_Maf (HMM E-Value=0.96)
Length = 171
Score = 34.3 bits (75), Expect = 0.34
Identities = 35/105 (33%), Positives = 48/105 (45%), Gaps = 15/105 (14%)
Query: 40 DPYLGITTHKMNIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKL-ANGEWIPRHFSKNK 98
D +GI Y L + K+E+K + K+ Y+ YS + A+ E + R NK
Sbjct: 11 DDDVGIRKGNFPGLYEELSSIKQEIKRLYKQ---VDGYDDKYSSIRADLELLRR---ANK 64
Query: 99 HQQTKFRDHIYRYLRIFDKK--AGFVIEPCYRYSLEGRVGAKISS 141
+ K RD YL +FDKK + FV P R S GRV S
Sbjct: 65 EYELKVRD----YLDVFDKKTTSSFVSTP--RVSSTGRVAGSYRS 103
>SB_33307| Best HMM Match : NAF1 (HMM E-Value=1.5e-18)
Length = 1085
Score = 31.5 bits (68), Expect = 2.4
Identities = 19/97 (19%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 442 ERNVNTPKEEADLPSTLEISNFDIKPDLPIVNDNEH--SSDLNSFVYTDTHLGGKNCDKK 499
E N+ + L + + +IKP +P NE+ + + + T H+ +C++
Sbjct: 340 EDNITLGPDPEALQEKDKFPHMEIKPQIPPNESNENVIMEESSVKIGTKRHITEVDCEEV 399
Query: 500 ESLTETDLPIATATEDKIEIIE----SKSKVQKEPDE 532
E +T + I + +++++ ++ +K+ +PDE
Sbjct: 400 EEVTSDSVYIMSVVQEELKAVQQTLVAKTTCLNDPDE 436
>SB_20121| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2306
Score = 31.5 bits (68), Expect = 2.4
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 84 LANGEWIPRHFSKNKHQQTK-FRDHIYRYLRIFDKKAGFVIEPCYRYSLEGRVGAKISST 142
++ EW+P H +K +Q K R R+ ++ V +LE + A I++
Sbjct: 2036 VSTAEWLPCHDKPSKKRQGKRTTTRGRRIRRLLIREESLVRLKTIAQTLEKKEWAMITTG 2095
Query: 143 KKFFKHERIDF--LVGCIAEMTEEE-EKQLLHPG 173
++ K E +DF L+ E+ EEE ++++HPG
Sbjct: 2096 HEYVKPE-VDFADLLFESEELDEEEVYREIIHPG 2128
>SB_20452| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 31.5 bits (68), Expect = 2.4
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Query: 262 ESSHNDEQSTRYRFRETDNRINRTKAKQVQKSSNVKNSDKTRISSRQNSSIVSPLSMKEM 321
E+SH D + + IN +Q S V NS R ++R+ S+ S+KE+
Sbjct: 727 EASHPDSFHLKNALEKMTQMINLLN-DSIQNSHKVVNSASPRKNTRKTKSLRKKASLKEL 785
Query: 322 KQK 324
K K
Sbjct: 786 KSK 788
>SB_11863| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 921
Score = 31.1 bits (67), Expect = 3.1
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 460 ISNFDIKPDLPIVNDNEHSSDLNSFVYTDTHLGGKNCDKKESLTETDLPI 509
I+N + P +P++N +SD N + L GK K+ ++D P+
Sbjct: 208 ITNLKVLPQVPVINQKSENSDNN--IAKKRKLKGKESSNKQIKVKSDKPV 255
>SB_31112| Best HMM Match : Dynein_heavy (HMM E-Value=0)
Length = 2532
Score = 30.7 bits (66), Expect = 4.1
Identities = 19/68 (27%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 104 FRDHIYRYLRIFDKKAGFVIEPCYRYSLEGRVGAKISSTKKFFK-HERIDFLVGCIAEMT 162
+ D I Y R+ + K +V+E C+R LEG +G ++++++ + +E++ + E +
Sbjct: 1099 YLDFISTYNRLLEIKDKYVLEQCHR--LEGGLGKLLAASEQLAELNEKLAVQKIAVTEKS 1156
Query: 163 EEEEKQLL 170
E EK L+
Sbjct: 1157 EACEKLLV 1164
>SB_21585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 479
Score = 30.3 bits (65), Expect = 5.5
Identities = 15/82 (18%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 428 KIKNGSKVGSDIKYERNVNTPKEEADLPSTLEISNFDIKPDLPIVNDNEHSSDLNSFVYT 487
K+ G + + +Y N+NTP+ E+ + + P+ D +++ + + ++
Sbjct: 77 KVSKGGETWTLNRYLANMNTPRPESYYEDVHTAQSLPVSRKPPLFQDLASAAE-SGWDFS 135
Query: 488 DTHLGGKNCDKKESLTETDLPI 509
G + D K ++T++ +P+
Sbjct: 136 SRWFGKNSTDLKGTMTQSKVPV 157
>SB_33309| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 646
Score = 30.3 bits (65), Expect = 5.5
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 213 RGKAFVRVLRDIEPGEEITCYYGEDF 238
RG+ F R +D+ PG E+ +YG+ +
Sbjct: 251 RGQIFYRSYKDVHPGTELLVWYGDKY 276
>SB_2986| Best HMM Match : Tis11B_C (HMM E-Value=6.6)
Length = 308
Score = 30.3 bits (65), Expect = 5.5
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 430 KNGSKVGSDIKYERNVNTPKEEADLPSTLEISNFDIKPDLP 470
K G K+GS Y+ V PK + S LE ++ KP LP
Sbjct: 170 KCGIKIGSSGDYK--VEEPKHAGSMSSNLESPKYECKPGLP 208
>SB_38362| Best HMM Match : BRCT (HMM E-Value=0)
Length = 1572
Score = 29.9 bits (64), Expect = 7.2
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 425 SFPKIKNGSKVGSDIKYERNVNTPKEEADLPSTLEISNFDI 465
SFP +K + G+D K +R+ P E T S FD+
Sbjct: 473 SFPSLKENREPGADGKGKRSKTQPDETTKADKTANKSEFDV 513
>SB_31487| Best HMM Match : HSP9_HSP12 (HMM E-Value=7.7)
Length = 122
Score = 29.9 bits (64), Expect = 7.2
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Query: 252 ERRGKGAFSVESSHNDEQSTRYRFRET----DNRINRTKAKQVQKSSNVKNSDKT--RIS 305
+ R K + + S + T+YR + + N NR K K+S +S+KT +++
Sbjct: 23 KNRNKNSMTASSDETTRKMTKYRNKNSLTASSNETNRKMTKYRNKNSLTASSNKTNRKMT 82
Query: 306 SRQNSSIVSPLSMKEMKQKGLTKY 329
+N + V+ +S + QK +T+Y
Sbjct: 83 KNRNKNSVT-VSSNKTNQK-MTQY 104
>SB_20830| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 29.9 bits (64), Expect = 7.2
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 214 GKAFVRVLRDIEPGEEITCYYGED 237
G + R +DIEPGEE+ +Y +
Sbjct: 66 GNVYYRAFKDIEPGEELLVWYSNE 89
>SB_19620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 123
Score = 29.9 bits (64), Expect = 7.2
Identities = 16/63 (25%), Positives = 27/63 (42%)
Query: 441 YERNVNTPKEEADLPSTLEISNFDIKPDLPIVNDNEHSSDLNSFVYTDTHLGGKNCDKKE 500
Y+ N + P D + L +N D + DL N + + + + T T L N D +
Sbjct: 2 YQHNRSDPSNNIDTRTDLSFANIDTRTDLSFANIDTKTDLFFANIDTRTDLSFANTDTRT 61
Query: 501 SLT 503
L+
Sbjct: 62 DLS 64
>SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 1026
Score = 29.9 bits (64), Expect = 7.2
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 262 ESSHNDEQSTRYRFRETDNRINRTKAKQVQKSSNVKN--SDKTRISSRQNSSIVSPLSMK 319
+S + + + R ++ + RI + K KQ+++ KN DKT ++ + +S +
Sbjct: 689 QSGQDLQTNKEKRLKKRERRIQKRKEKQLRRKDQTKNGREDKTGSNASETASAIGDGVKG 748
Query: 320 EMKQK 324
E K K
Sbjct: 749 EQKSK 753
>SB_39463| Best HMM Match : U79_P34 (HMM E-Value=1.3)
Length = 329
Score = 29.5 bits (63), Expect = 9.6
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Query: 243 NCYCECETCERRGKGAF---SVESSHNDEQSTRYRFRETDNRINRTKAKQVQKSSNVKNS 299
NC CEC +C+R GAF + ND + + R ++ + QK N + +
Sbjct: 93 NCDCECASCKRL-MGAFFGTCLSLFVNDGRMDKSSKTSVKRTKARKRSLKRQKRKNERQT 151
Query: 300 DKTRISSRQ 308
DK R R+
Sbjct: 152 DKRRKRKRK 160
>SB_23591| Best HMM Match : PAN (HMM E-Value=5.9e-07)
Length = 336
Score = 29.5 bits (63), Expect = 9.6
Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 220 VLRDIEPGEEITCYYGEDFFGNSNCYCECETCERRGKGAFSVE-SSHNDEQSTRYRFRET 278
++ D +PG+E+T + +F G + C + +++ + SS + ST R +
Sbjct: 180 IITDEQPGKELTNHVEANFTGVTEVLCRIKCFISDTCQSYNYDNSSQTCQTSTSTRVQNP 239
Query: 279 DNRINRTKA 287
D+ IN+T +
Sbjct: 240 DDVINKTNS 248
>SB_7420| Best HMM Match : Extensin_2 (HMM E-Value=0.061)
Length = 1354
Score = 29.5 bits (63), Expect = 9.6
Identities = 29/124 (23%), Positives = 59/124 (47%), Gaps = 15/124 (12%)
Query: 417 LLDTCIQPSFPKIKNGSKVGSDIKYERNVNTPKEEADLPSTLEISNFDIKPDLPIVNDNE 476
L D C + P + S V + YE N+N E++D PS+++I N + ++D++
Sbjct: 373 LPDECAETKAP---SASAVVRESDYE-NMNLYAEDSDQPSSMDILNEE-------MSDHK 421
Query: 477 HSSDLNSFVYTDTHLGGKNCDKKESLTETDLPIATATEDKIEIIESKSKVQKEPDEIDCT 536
+ SDL + Y + + + +K + D PI+ I + + +E + ++
Sbjct: 422 NMSDLGA--YEEVVVKREEIEK--DMNAKDKPISPTPVAPIRSKRGQKQRVREYENVEVK 477
Query: 537 VRNE 540
+R+E
Sbjct: 478 LRDE 481
>SB_1285| Best HMM Match : SET (HMM E-Value=0.011)
Length = 829
Score = 29.5 bits (63), Expect = 9.6
Identities = 26/78 (33%), Positives = 31/78 (39%), Gaps = 13/78 (16%)
Query: 193 GPAAYINHDCRPTCTFE--ATD-----RGKAF---VRVLRDIEPGEEITCYY---GEDFF 239
G + NH C PT FE A D GK + RDI GEEIT Y +
Sbjct: 726 GKVKFTNHACSPTAEFEFKARDGVVAPEGKELSWHLVATRDINKGEEITFNYTLTEYEMD 785
Query: 240 GNSNCYCECETCERRGKG 257
C C + C R +G
Sbjct: 786 APFECQCGAKQCLGRVQG 803
>SB_45707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 29.5 bits (63), Expect = 9.6
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 269 QSTRYRFRETDNRINRTKAKQVQKSSNVKNSDKTRISSR--QNSSIVSPLSMKEMKQKG 325
Q+TR R+T R R +A + ++ S + KT+ S + Q+ P K+ +Q G
Sbjct: 142 QATRQASRKTKTRQLRDQAARTRQESRKTKTSKTKASKQPDQDKQAARPRQAKQARQAG 200
>SB_43621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1122
Score = 29.5 bits (63), Expect = 9.6
Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Query: 424 PSFPKIKNGSKVGSDIKYERNVNTPKEEADLPSTLEISNFDIKPDLPIVNDNEHSSDLNS 483
P FP ++GS Y+ P + + P SNF + D+P++ND++ SD+ S
Sbjct: 634 PPFPSWSL-CRLGSSSSYQ-----PAKGLEQPGFFPSSNFLLAWDIPLINDSQ--SDVTS 685
Query: 484 -FVYTDTHLGGKNCDKKESLTETDLPIATATEDKIEIIESKS 524
F H G K+ + +LP + + + ++ S
Sbjct: 686 QFDGQSKHFGVKSTADEAWPAPNELPTVAGSSTTLPLHQALS 727
>SB_42226| Best HMM Match : efhand (HMM E-Value=0.25)
Length = 550
Score = 29.5 bits (63), Expect = 9.6
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 516 KIEIIESKSKVQKEPDEIDCTVRNENSSLKSGIDFR 551
+ E+IE K ++Q+E +E+D +RN++ + D R
Sbjct: 438 QFELIEQKRRIQEEQEELDRHIRNKDLDMNLHGDAR 473
>SB_39408| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 2389
Score = 29.5 bits (63), Expect = 9.6
Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Query: 255 GKGAFSVESSHNDEQSTRYRFRETD--NRINRTKAKQVQKSSNVKNSDKTRISSRQNSSI 312
G ++ ++ S+RY + N IN K+ +S N+DK ++ RQ
Sbjct: 438 GNKSYCTQAGLVGPMSSRYNRNSNNKNNNINYKGQKRNDNNSFGNNNDKKKLKQRQEHQA 497
Query: 313 VSPLSMKEMKQK 324
PL +K K
Sbjct: 498 GEPLQAAHLKHK 509
>SB_32577| Best HMM Match : PH (HMM E-Value=7e-17)
Length = 1248
Score = 29.5 bits (63), Expect = 9.6
Identities = 29/124 (23%), Positives = 59/124 (47%), Gaps = 15/124 (12%)
Query: 417 LLDTCIQPSFPKIKNGSKVGSDIKYERNVNTPKEEADLPSTLEISNFDIKPDLPIVNDNE 476
L D C + P + S V + YE N+N E++D PS+++I N + ++D++
Sbjct: 152 LPDECAETKAP---SASAVVRESDYE-NMNLYAEDSDQPSSMDILNEE-------MSDHK 200
Query: 477 HSSDLNSFVYTDTHLGGKNCDKKESLTETDLPIATATEDKIEIIESKSKVQKEPDEIDCT 536
+ SDL + Y + + + +K + D PI+ I + + +E + ++
Sbjct: 201 NMSDLGA--YEEVVVKREEIEK--DMNAKDKPISPTPVAPIRSKRGQKQRVREYENVEVK 256
Query: 537 VRNE 540
+R+E
Sbjct: 257 LRDE 260
>SB_29018| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1047
Score = 29.5 bits (63), Expect = 9.6
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Query: 221 LRDIEPGEEITCYYGEDFFGN--SNCYCECETC 251
LR I+ GEE+T Y +G CYCE +C
Sbjct: 214 LRTIKAGEELTFDYQLQRYGKIAQTCYCESPSC 246
>SB_20225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1548
Score = 29.5 bits (63), Expect = 9.6
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 244 CYC-ECETCERRGKGAFSVESSHNDEQSTRYRFRETDNRINRTKAKQVQKSSNVKNSDKT 302
C C E ETC +G +S+H E T Y + R +R ++ + KS++V +S ++
Sbjct: 1111 CDCGEDETCVAC-RGEKHSDSTHALEDYTTYSIASSSRRFSRGSSENLSKSASVTSSTES 1169
>SB_7038| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 224
Score = 29.5 bits (63), Expect = 9.6
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 45 ITTHKMNIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNKHQQTKF 104
I H + Y K N + K ++ E+IH + KA SKL + + R +KNK + +
Sbjct: 143 IDNHMYHSLYMKSKGNVFKNKRVLMEYIHKKKAEKARSKLLSDQAEARR-NKNKAAKQRR 201
Query: 105 RDHI 108
D +
Sbjct: 202 DDRM 205
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.315 0.133 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,775,153
Number of Sequences: 59808
Number of extensions: 947717
Number of successful extensions: 1912
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 1890
Number of HSP's gapped (non-prelim): 43
length of query: 697
length of database: 16,821,457
effective HSP length: 87
effective length of query: 610
effective length of database: 11,618,161
effective search space: 7087078210
effective search space used: 7087078210
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 63 (29.5 bits)
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