GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000919-TA|BGIBMGA000919-PA|IPR001214|SET
         (697 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    27   1.7  
AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    27   1.7  
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    25   5.1  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    25   6.7  
AF316637-1|AAG45165.1|  224|Anopheles gambiae glutathione S-tran...    25   8.9  

>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 27.1 bits (57), Expect = 1.7
 Identities = 13/59 (22%), Positives = 32/59 (54%), Gaps = 3/59 (5%)

Query: 277  ETDNRINRTKAKQVQKSSNVKNSDKTRISSR---QNSSIVSPLSMKEMKQKGLTKYDAE 332
            E++   N    ++ + ++NV+N+ +  +++    QN   V P+ ++E + +G+   D E
Sbjct: 1318 ESEVAANVENQREDEVAANVENAKENEVAANVENQNEDEVQPMEVEEERDEGVAADDPE 1376


>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 27.1 bits (57), Expect = 1.7
 Identities = 17/73 (23%), Positives = 30/73 (41%)

Query: 459 EISNFDIKPDLPIVNDNEHSSDLNSFVYTDTHLGGKNCDKKESLTETDLPIATATEDKIE 518
           + +N++ K     +N    + D+   +Y D   G K  D +  +T   LPI   T     
Sbjct: 29  KFANYETKFINDFINFTRPAGDIMEPIYYDYDGGTKTADYETGMTLGGLPIPEETAGNPV 88

Query: 519 IIESKSKVQKEPD 531
              +  +V + PD
Sbjct: 89  RAAAAGEVTRPPD 101


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 25.4 bits (53), Expect = 5.1
 Identities = 15/41 (36%), Positives = 22/41 (53%)

Query: 253 RRGKGAFSVESSHNDEQSTRYRFRETDNRINRTKAKQVQKS 293
           RR   +  VES     + TR + R +DNR N  ++ Q Q+S
Sbjct: 177 RRAPISNFVESDGIWREVTRRKSRRSDNRRNERESTQYQQS 217


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 25.0 bits (52), Expect = 6.7
 Identities = 9/19 (47%), Positives = 13/19 (68%)

Query: 95  SKNKHQQTKFRDHIYRYLR 113
           S NKHQ+ K  D+ Y+Y +
Sbjct: 957 SYNKHQEYKSSDYYYKYYK 975


>AF316637-1|AAG45165.1|  224|Anopheles gambiae glutathione
           S-transferase D8 protein.
          Length = 224

 Score = 24.6 bits (51), Expect = 8.9
 Identities = 13/35 (37%), Positives = 20/35 (57%)

Query: 311 SIVSPLSMKEMKQKGLTKYDAELLIAQGCIADVLD 345
           S+VS ++  E+ Q  L+KY A     +GC A + D
Sbjct: 159 SLVSTVTSLEVVQHDLSKYPAISAWYEGCKATMAD 193


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.315    0.133    0.391 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 672,313
Number of Sequences: 2123
Number of extensions: 27090
Number of successful extensions: 45
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 40
Number of HSP's gapped (non-prelim): 6
length of query: 697
length of database: 516,269
effective HSP length: 69
effective length of query: 628
effective length of database: 369,782
effective search space: 232223096
effective search space used: 232223096
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 51 (24.6 bits)