Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000919-TA|BGIBMGA000919-PA|IPR001214|SET
(697 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23511-4|AAC46793.1| 288|Caenorhabditis elegans Temporarily ass... 220 2e-57
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 41 0.003
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 41 0.003
U37430-5|AAB52674.2| 389|Caenorhabditis elegans Hypothetical pr... 37 0.042
AC024776-10|AAM97972.1| 159|Caenorhabditis elegans Hypothetical... 36 0.073
AC024776-9|AAK68462.1| 244|Caenorhabditis elegans Hypothetical ... 36 0.073
AL021448-1|CAA16276.2| 898|Caenorhabditis elegans Hypothetical ... 36 0.097
AF233290-1|AAF62516.1| 898|Caenorhabditis elegans maternal-effe... 36 0.097
U13875-5|AAA21163.1| 739|Caenorhabditis elegans Set (trithorax/... 34 0.39
U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/... 34 0.39
U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/... 34 0.39
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 32 1.2
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 32 1.2
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 32 1.2
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 32 1.2
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 32 1.6
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 32 1.6
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 32 1.6
U00043-4|AAN65291.1| 1076|Caenorhabditis elegans Hypothetical pr... 32 1.6
AF047651-6|AAC02725.3| 426|Caenorhabditis elegans Hypothetical ... 31 2.1
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 31 2.8
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl... 31 3.6
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl... 31 3.6
AF025454-7|AAC71154.3| 367|Caenorhabditis elegans Hypothetical ... 31 3.6
Z11505-10|CAA77588.2| 590|Caenorhabditis elegans Hypothetical p... 30 4.8
AF003139-11|AAK73871.1| 1503|Caenorhabditis elegans Hypothetical... 30 4.8
Z81485-2|CAB03974.2| 708|Caenorhabditis elegans Hypothetical pr... 30 6.4
Z48783-5|CAA88699.1| 1385|Caenorhabditis elegans Hypothetical pr... 30 6.4
>U23511-4|AAC46793.1| 288|Caenorhabditis elegans Temporarily
assigned gene nameprotein 337 protein.
Length = 288
Score = 220 bits (538), Expect = 2e-57
Identities = 114/263 (43%), Positives = 159/263 (60%), Gaps = 9/263 (3%)
Query: 22 MTPRELSEYDDLATALIVDPYLGITTHKMNIRYRPLKTNK-EELKNIIKEFIHTQDYNKA 80
MTP EL +DD AT L+VD L TTHKM+ + R L ++ + ++K F +D+ A
Sbjct: 24 MTPTELCYFDDFATTLVVDSVLNFTTHKMSKKRRYLYQDEYRTARTVMKTFREQRDWTNA 83
Query: 81 YSKLANGEWIPRHFSK-NKHQQTKFRDHIYRYLRIFDKKAGFVIEPCYRYSLEGRVGAKI 139
L + SK ++ +FRDHI R+L +F +G+ I+ C RYS EG GAK+
Sbjct: 84 IYGLLTLRSVSHFLSKLPPNKLFEFRDHIVRFLNMFILDSGYTIQECKRYSQEGHQGAKL 143
Query: 140 SSTKKFFKHERIDFLVGCIAEMTEEEEKQLLHPGKNDFSVMYSCRKNCAQLWLGPAAYIN 199
ST + + ++I+ L G + ++ E+E +L +DFSVMYS RK C+ LWLGP AYIN
Sbjct: 144 VSTGVWSRGDKIERLSGVVCLLSSEDEDSILAQEGSDFSVMYSTRKRCSTLWLGPGAYIN 203
Query: 200 HDCRPTCTFEATDRGKAFVRVLRDIEPGEEITCYYGEDFFGNSNCYCECETCERRGKGAF 259
HDCRPTC F + A +RVLRD+ PG+EITC+YG +FFG +N CEC TCE+ GAF
Sbjct: 204 HDCRPTCEF-VSHGSTAHIRVLRDMVPGDEITCFYGSEFFGPNNIDCECCTCEKNMNGAF 262
Query: 260 S-VESSHN-----DEQSTRYRFR 276
S + + N E+ T+Y R
Sbjct: 263 SYLRGNENAEPIISEKKTKYELR 285
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 41.1 bits (92), Expect = 0.003
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 9/68 (13%)
Query: 193 GPAAYINHDCRPTCTFEATDRG------KAFVRVLRDIEPGEEITCYYGEDFFGNSN--- 243
GPA YINH C P C+ + D G K + R I EE+T Y + G ++
Sbjct: 2489 GPARYINHSCDPNCSTQILDAGSGAREKKIIITANRPISANEELTYDYQFELEGTTDKIP 2548
Query: 244 CYCECETC 251
C C C
Sbjct: 2549 CLCGAPNC 2556
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 41.1 bits (92), Expect = 0.003
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 9/68 (13%)
Query: 193 GPAAYINHDCRPTCTFEATDRG------KAFVRVLRDIEPGEEITCYYGEDFFGNSN--- 243
GPA YINH C P C+ + D G K + R I EE+T Y + G ++
Sbjct: 2489 GPARYINHSCDPNCSTQILDAGSGAREKKIIITANRPISANEELTYDYQFELEGTTDKIP 2548
Query: 244 CYCECETC 251
C C C
Sbjct: 2549 CLCGAPNC 2556
>U37430-5|AAB52674.2| 389|Caenorhabditis elegans Hypothetical
protein K09F5.5 protein.
Length = 389
Score = 37.1 bits (82), Expect = 0.042
Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
Query: 195 AAYINHDCRPTC---TFEATDRGKAFVRVLRD--IEPGEEITCYYGEDFFGNSNCYCECE 249
A +INH C P + DR + + I+PGEEIT YG F + C C
Sbjct: 170 ARFINHSCNPNALVKVWTVPDRPMKSLGIFASKVIKPGEEITFDYGTSFRNDQPCQCGEA 229
Query: 250 TC 251
C
Sbjct: 230 AC 231
>AC024776-10|AAM97972.1| 159|Caenorhabditis elegans Hypothetical
protein Y41D4B.12b protein.
Length = 159
Score = 36.3 bits (80), Expect = 0.073
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 7/64 (10%)
Query: 197 YINHDCRPTCTFEATDRGK----AFVRVLRDIEPGEEITCYYGEDFFGNSN---CYCECE 249
++NH C P C G+ A + RDI GEE+ YG N C C+ E
Sbjct: 86 FLNHSCEPNCEIILARLGRMIPAAGIFAKRDIVRGEELCYDYGHSAIEGENRKLCLCKSE 145
Query: 250 TCER 253
C +
Sbjct: 146 KCRK 149
>AC024776-9|AAK68462.1| 244|Caenorhabditis elegans Hypothetical
protein Y41D4B.12a protein.
Length = 244
Score = 36.3 bits (80), Expect = 0.073
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 7/64 (10%)
Query: 197 YINHDCRPTCTFEATDRGK----AFVRVLRDIEPGEEITCYYGEDFFGNSN---CYCECE 249
++NH C P C G+ A + RDI GEE+ YG N C C+ E
Sbjct: 171 FLNHSCEPNCEIILARLGRMIPAAGIFAKRDIVRGEELCYDYGHSAIEGENRKLCLCKSE 230
Query: 250 TCER 253
C +
Sbjct: 231 KCRK 234
>AL021448-1|CAA16276.2| 898|Caenorhabditis elegans Hypothetical
protein Y2H9A.1 protein.
Length = 898
Score = 35.9 bits (79), Expect = 0.097
Identities = 35/137 (25%), Positives = 56/137 (40%), Gaps = 16/137 (11%)
Query: 197 YINHDCRPTCT-------FEATDRG-----KAFVRVLRDIEPGEEITCYYGEDFFGN-SN 243
YINH C P + T G ++++R +R I+ G+EIT Y + N +
Sbjct: 615 YINHSCDPNAASFVTKVFVKKTKEGSLYDTRSYIRAIRTIDDGDEITFSYNMNNEENLPD 674
Query: 244 CYCECETC-ERRGKG-AFSVESSHNDEQSTRYRFRETDNRINRTKAKQVQKSSNVKNSDK 301
C C E C GK E + + E++ + + K + N S K
Sbjct: 675 CECGAENCMGTMGKAKREKPEVADSSEKAAKKNKSSKKKSVKNQNRKSQEAGKNGTASKK 734
Query: 302 TRIS-SRQNSSIVSPLS 317
+ IS S+ ++S S S
Sbjct: 735 SEISPSKPSTSSASSTS 751
>AF233290-1|AAF62516.1| 898|Caenorhabditis elegans maternal-effect
sterile 4 protein.
Length = 898
Score = 35.9 bits (79), Expect = 0.097
Identities = 35/137 (25%), Positives = 56/137 (40%), Gaps = 16/137 (11%)
Query: 197 YINHDCRPTCT-------FEATDRG-----KAFVRVLRDIEPGEEITCYYGEDFFGN-SN 243
YINH C P + T G ++++R +R I+ G+EIT Y + N +
Sbjct: 615 YINHSCDPNAASFVTKVFVKKTKEGSLYDTRSYIRAIRTIDDGDEITFSYNMNNEENLPD 674
Query: 244 CYCECETC-ERRGKG-AFSVESSHNDEQSTRYRFRETDNRINRTKAKQVQKSSNVKNSDK 301
C C E C GK E + + E++ + + K + N S K
Sbjct: 675 CECGAENCMGTMGKAKREKPEVADSSEKAAKKNKSSKKKSVKNQNRKSQEAGKNGTASKK 734
Query: 302 TRIS-SRQNSSIVSPLS 317
+ IS S+ ++S S S
Sbjct: 735 SEISPSKPSTSSASSTS 751
>U13875-5|AAA21163.1| 739|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
b protein.
Length = 739
Score = 33.9 bits (74), Expect = 0.39
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 8/63 (12%)
Query: 195 AAYINHDCRPTC-----TFEATDRGKAFVRVLRDIEPGEEITCYYGEDFFGNS-NCYCEC 248
A +INH C+P C T E R + R + I+ GEEIT Y + +C C
Sbjct: 674 ARFINHSCQPNCYAKVLTIEGEKRIVIYSRTI--IKKGEEITYDYKFPIEDDKIDCLCGA 731
Query: 249 ETC 251
+TC
Sbjct: 732 KTC 734
>U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
c protein.
Length = 1510
Score = 33.9 bits (74), Expect = 0.39
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 8/63 (12%)
Query: 195 AAYINHDCRPTC-----TFEATDRGKAFVRVLRDIEPGEEITCYYGEDFFGNS-NCYCEC 248
A +INH C+P C T E R + R + I+ GEEIT Y + +C C
Sbjct: 1445 ARFINHSCQPNCYAKVLTIEGEKRIVIYSRTI--IKKGEEITYDYKFPIEDDKIDCLCGA 1502
Query: 249 ETC 251
+TC
Sbjct: 1503 KTC 1505
>U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
a protein.
Length = 1507
Score = 33.9 bits (74), Expect = 0.39
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 8/63 (12%)
Query: 195 AAYINHDCRPTC-----TFEATDRGKAFVRVLRDIEPGEEITCYYGEDFFGNS-NCYCEC 248
A +INH C+P C T E R + R + I+ GEEIT Y + +C C
Sbjct: 1442 ARFINHSCQPNCYAKVLTIEGEKRIVIYSRTI--IKKGEEITYDYKFPIEDDKIDCLCGA 1499
Query: 249 ETC 251
+TC
Sbjct: 1500 KTC 1502
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 32.3 bits (70), Expect = 1.2
Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 236 EDFFGNSNCYCECETCERRGKGAFSVESSHNDEQSTRYRFRETDNRINRTKAKQVQKSSN 295
E+ G C+ +C+ E + +E S +E+ ++R ++ ++ K+ QKS
Sbjct: 442 EEKSGLYKCHAKCDYGEGQSSAMVKIEQSDVEEELMKHR-KDAEDEYQ----KEEQKSQT 496
Query: 296 VKNSDKTRISSRQNSSIVSP 315
++ K R++ R S SP
Sbjct: 497 LQAETKKRVARRSKSKSKSP 516
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 32.3 bits (70), Expect = 1.2
Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 236 EDFFGNSNCYCECETCERRGKGAFSVESSHNDEQSTRYRFRETDNRINRTKAKQVQKSSN 295
E+ G C+ +C+ E + +E S +E+ ++R ++ ++ K+ QKS
Sbjct: 442 EEKSGLYKCHAKCDYGEGQSSAMVKIEQSDVEEELMKHR-KDAEDEYQ----KEEQKSQT 496
Query: 296 VKNSDKTRISSRQNSSIVSP 315
++ K R++ R S SP
Sbjct: 497 LQAETKKRVARRSKSKSKSP 516
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 32.3 bits (70), Expect = 1.2
Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 236 EDFFGNSNCYCECETCERRGKGAFSVESSHNDEQSTRYRFRETDNRINRTKAKQVQKSSN 295
E+ G C+ +C+ E + +E S +E+ ++R ++ ++ K+ QKS
Sbjct: 442 EEKSGLYKCHAKCDYGEGQSSAMVKIEQSDVEEELMKHR-KDAEDEYQ----KEEQKSQT 496
Query: 296 VKNSDKTRISSRQNSSIVSP 315
++ K R++ R S SP
Sbjct: 497 LQAETKKRVARRSKSKSKSP 516
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 32.3 bits (70), Expect = 1.2
Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 236 EDFFGNSNCYCECETCERRGKGAFSVESSHNDEQSTRYRFRETDNRINRTKAKQVQKSSN 295
E+ G C+ +C+ E + +E S +E+ ++R ++ ++ K+ QKS
Sbjct: 442 EEKSGLYKCHAKCDYGEGQSSAMVKIEQSDVEEELMKHR-KDAEDEYQ----KEEQKSQT 496
Query: 296 VKNSDKTRISSRQNSSIVSP 315
++ K R++ R S SP
Sbjct: 497 LQAETKKRVARRSKSKSKSP 516
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 31.9 bits (69), Expect = 1.6
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 19/121 (15%)
Query: 440 KYERNVNTPKEEADLPSTLEISNFDIKPDLPIVND---------NEHSSDLNSFVYTDTH 490
K++ + T + EA LE +N +K L ND N+H+S + H
Sbjct: 1234 KWKTDAYTVRSEA---KALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRH 1290
Query: 491 LGGKNCDKKESLTETDLPIATATEDKIEIIES-----KSKVQKEPDEIDCTVRNENSSLK 545
L + D K +L + ++ + +T++++ +E +S K E+D +R EN LK
Sbjct: 1291 LEDELADTKGNLVQKEMDL-ESTQNRLRSLEDQHSTLQSDANKWRGELDAALR-ENDILK 1348
Query: 546 S 546
S
Sbjct: 1349 S 1349
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 31.9 bits (69), Expect = 1.6
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 19/121 (15%)
Query: 440 KYERNVNTPKEEADLPSTLEISNFDIKPDLPIVND---------NEHSSDLNSFVYTDTH 490
K++ + T + EA LE +N +K L ND N+H+S + H
Sbjct: 1307 KWKTDAYTVRSEA---KALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRH 1363
Query: 491 LGGKNCDKKESLTETDLPIATATEDKIEIIES-----KSKVQKEPDEIDCTVRNENSSLK 545
L + D K +L + ++ + +T++++ +E +S K E+D +R EN LK
Sbjct: 1364 LEDELADTKGNLVQKEMDL-ESTQNRLRSLEDQHSTLQSDANKWRGELDAALR-ENDILK 1421
Query: 546 S 546
S
Sbjct: 1422 S 1422
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 31.9 bits (69), Expect = 1.6
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 19/121 (15%)
Query: 440 KYERNVNTPKEEADLPSTLEISNFDIKPDLPIVND---------NEHSSDLNSFVYTDTH 490
K++ + T + EA LE +N +K L ND N+H+S + H
Sbjct: 1307 KWKTDAYTVRSEA---KALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRH 1363
Query: 491 LGGKNCDKKESLTETDLPIATATEDKIEIIES-----KSKVQKEPDEIDCTVRNENSSLK 545
L + D K +L + ++ + +T++++ +E +S K E+D +R EN LK
Sbjct: 1364 LEDELADTKGNLVQKEMDL-ESTQNRLRSLEDQHSTLQSDANKWRGELDAALR-ENDILK 1421
Query: 546 S 546
S
Sbjct: 1422 S 1422
>U00043-4|AAN65291.1| 1076|Caenorhabditis elegans Hypothetical protein
T26A5.5a protein.
Length = 1076
Score = 31.9 bits (69), Expect = 1.6
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 423 QPSFPKIKNGSKVGS-DIKYERNVNTPKEEADLPSTLEISNFDIKPDLPIVNDNEHSSDL 481
+PSF N S+ S D Y TP + LP+T I+ I+ D PI N+ S +
Sbjct: 950 RPSFIPDFNSSRNSSIDTPYTPTTVTPSRSSWLPNTSSINRHSIEDDSPIDVVNDSLSPI 1009
Query: 482 N 482
N
Sbjct: 1010 N 1010
>AF047651-6|AAC02725.3| 426|Caenorhabditis elegans Hypothetical
protein C05D2.8 protein.
Length = 426
Score = 31.5 bits (68), Expect = 2.1
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 481 LNSFVYTDTHLGGKNCDKKESLTETDLPIATATEDKIEIIESKSKVQKEPDEIDCTVRNE 540
+N ++TDT++ C +KE TE+ ++ K I+ K+ P +I+ ++N
Sbjct: 141 VNEELHTDTNVKSIQCPEKEWKTESGFIVSCIEPMKKWRIQFNGKLASAPGKIN-FIKNG 199
Query: 541 NSSLKSGI 548
+ +K GI
Sbjct: 200 SEEMKDGI 207
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 31.1 bits (67), Expect = 2.8
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 506 DLPIATATEDKIEIIESKSKVQKEPDEIDCTVRNENSSLKS 546
+L AT+ +D +EI+E K+ K+ DE N+N S+++
Sbjct: 72 ELKQATSIKDLLEILEIIQKIFKKQDEFQQVQENQNKSIEN 112
>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform b protein.
Length = 1590
Score = 30.7 bits (66), Expect = 3.6
Identities = 30/129 (23%), Positives = 50/129 (38%), Gaps = 13/129 (10%)
Query: 136 GAKISSTKKFFKHERIDFLVGCIAEMTEEEEKQLLHPGKNDFSVMYSCRKNC----AQLW 191
G + + K K I +G + E + E+++ + Y C A ++
Sbjct: 681 GCGLRAVKDIKKGRFIIEYIGEVVERDDYEKRKTKYAADKKHKHHYLCDTGVYTIDATVY 740
Query: 192 LGPAAYINHDCRPTCTFE--ATDRGKAFVRVL-----RDIEPGEEITCYYGEDFFGN--S 242
P+ ++NH C P E + R V + R I+ GEEIT Y +G
Sbjct: 741 GNPSRFVNHSCDPNAICEKWSVPRTPGDVNRVGFFSKRFIKAGEEITFDYQFVNYGRDAQ 800
Query: 243 NCYCECETC 251
C+C +C
Sbjct: 801 QCFCGSASC 809
>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform a protein.
Length = 1604
Score = 30.7 bits (66), Expect = 3.6
Identities = 30/129 (23%), Positives = 50/129 (38%), Gaps = 13/129 (10%)
Query: 136 GAKISSTKKFFKHERIDFLVGCIAEMTEEEEKQLLHPGKNDFSVMYSCRKNC----AQLW 191
G + + K K I +G + E + E+++ + Y C A ++
Sbjct: 695 GCGLRAVKDIKKGRFIIEYIGEVVERDDYEKRKTKYAADKKHKHHYLCDTGVYTIDATVY 754
Query: 192 LGPAAYINHDCRPTCTFE--ATDRGKAFVRVL-----RDIEPGEEITCYYGEDFFGN--S 242
P+ ++NH C P E + R V + R I+ GEEIT Y +G
Sbjct: 755 GNPSRFVNHSCDPNAICEKWSVPRTPGDVNRVGFFSKRFIKAGEEITFDYQFVNYGRDAQ 814
Query: 243 NCYCECETC 251
C+C +C
Sbjct: 815 QCFCGSASC 823
>AF025454-7|AAC71154.3| 367|Caenorhabditis elegans Hypothetical
protein F34D6.4 protein.
Length = 367
Score = 30.7 bits (66), Expect = 3.6
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
Query: 197 YINHDCRPTCTFEATDRGKAFVRVL-------RDIEPGEEITCYYGEDFFGNSNCYCECE 249
+INH C P ++++ + I GEE+T YGE ++ N C C+
Sbjct: 294 FINHSCAPNVKVANISWDYDKIQLIHMCFFTDKAIRKGEELTIDYGEAWWANKKFPCLCK 353
Query: 250 TCERR 254
+ E R
Sbjct: 354 SSECR 358
>Z11505-10|CAA77588.2| 590|Caenorhabditis elegans Hypothetical
protein F59B2.11 protein.
Length = 590
Score = 30.3 bits (65), Expect = 4.8
Identities = 18/77 (23%), Positives = 30/77 (38%)
Query: 249 ETCERRGKGAFSVESSHNDEQSTRYRFRETDNRINRTKAKQVQKSSNVKNSDKTRISSRQ 308
E + R G + + DE++ R+ NRI R + ++++ S +
Sbjct: 134 EDSDNRSGGRRGQSNQYEDEETNEERYDRNGNRITRGGRTRGNNREGSSGAERSNTHSNE 193
Query: 309 NSSIVSPLSMKEMKQKG 325
NSS S K K G
Sbjct: 194 NSSSSSRTIEKTTKMIG 210
>AF003139-11|AAK73871.1| 1503|Caenorhabditis elegans Hypothetical
protein F53G12.3 protein.
Length = 1503
Score = 30.3 bits (65), Expect = 4.8
Identities = 14/50 (28%), Positives = 27/50 (54%)
Query: 60 NKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNKHQQTKFRDHIY 109
+KE L + +++ TQ Y+ Y+ LAN EW ++ ++ + D +Y
Sbjct: 24 SKETLFSALQQEAETQRYDGWYNNLANSEWGSAGSRLHRDARSYYSDGVY 73
>Z81485-2|CAB03974.2| 708|Caenorhabditis elegans Hypothetical
protein C49F5.2 protein.
Length = 708
Score = 29.9 bits (64), Expect = 6.4
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Query: 221 LRDIEPGEEITCYYGEDF--FGNSNCYCECETC 251
L+DI PGE +T YG ++ F C C C
Sbjct: 585 LKDIFPGEPLTLDYGSEYKVFRRQRCLCRTFAC 617
>Z48783-5|CAA88699.1| 1385|Caenorhabditis elegans Hypothetical
protein F33H1.4 protein.
Length = 1385
Score = 29.9 bits (64), Expect = 6.4
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 253 RRGKGAFSVES-----SHNDEQSTRYRFRETDNR--INRT-KAKQVQKSSNVKNSDKTRI 304
RRG+G + S SH DEQS + FRE ++ +N + + + + + DK +
Sbjct: 30 RRGRGRGTRRSQLPTTSHADEQSEEHEFREDEDPEFLNEDHEDDTLVEGDDRSDMDKIKQ 89
Query: 305 SSRQNSSIVSPLSMKEMK 322
+Q IV+P++ K +
Sbjct: 90 IQQQKMMIVTPMAQKRTR 107
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.315 0.133 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,823,245
Number of Sequences: 27539
Number of extensions: 718366
Number of successful extensions: 1736
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1705
Number of HSP's gapped (non-prelim): 51
length of query: 697
length of database: 12,573,161
effective HSP length: 86
effective length of query: 611
effective length of database: 10,204,807
effective search space: 6235137077
effective search space used: 6235137077
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 63 (29.5 bits)
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