Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000919-TA|BGIBMGA000919-PA|IPR001214|SET
(697 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g30860.1 68417.m04381 SET domain-containing protein low simil... 40 0.007
At5g42400.1 68418.m05162 SET domain-containing protein (TXR7) co... 37 0.052
At5g40340.1 68418.m04894 PWWP domain-containing protein KED, Nic... 34 0.37
At5g23970.1 68418.m02817 transferase family protein similar to ... 34 0.37
At1g76710.2 68414.m08928 SET domain-containing protein (ASHH1) l... 34 0.37
At1g76710.1 68414.m08927 SET domain-containing protein (ASHH1) l... 34 0.37
At3g28770.1 68416.m03591 expressed protein 33 0.48
At5g06620.1 68418.m00748 expressed protein 33 0.64
At4g39190.1 68417.m05549 expressed protein ; expression support... 33 0.64
At1g77300.1 68414.m09002 SET domain-containing protein similar t... 33 0.64
At1g73730.1 68414.m08537 ethylene-insensitive3-like3 (EIL3) iden... 31 2.0
At2g23380.1 68415.m02792 curly leaf protein (CURLY LEAF) / polyc... 31 2.6
At4g15180.1 68417.m02328 SET domain-containing protein contains ... 31 3.4
At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid t... 30 4.5
At5g40450.1 68418.m04905 expressed protein 30 6.0
At5g05070.1 68418.m00538 zinc finger (DHHC type) family protein ... 30 6.0
At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein ... 30 6.0
At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein ... 30 6.0
At1g21580.1 68414.m02698 hydroxyproline-rich glycoprotein family... 29 7.9
>At4g30860.1 68417.m04381 SET domain-containing protein low
similarity to IL-5 promoter REII-region-binding protein
[Homo sapiens] GI:12642795; contains Pfam profile
PF00856: SET domain
Length = 497
Score = 39.5 bits (88), Expect = 0.007
Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 13/113 (11%)
Query: 152 DFLVGCIAEMTEEEEKQ-----LLHPGKNDFSVMYSCRKNCA--QLWLGPAA-YINHDCR 203
DF+V I E+ + + + + H G DF M +K+ + G A+ ++NH C
Sbjct: 350 DFIVEYIGEVISDAQCEQRLWDMKHKGMKDF-YMCEIQKDFTIDATFKGNASRFLNHSCN 408
Query: 204 PTCTFEATD-RGKAFVRVL--RDIEPGEEITCYYGEDFFG-NSNCYCECETCE 252
P C E G+ V V R IE GE +T Y FG C C E C+
Sbjct: 409 PNCVLEKWQVEGETRVGVFAARQIEAGEPLTYDYRFVQFGPEVKCNCGSENCQ 461
>At5g42400.1 68418.m05162 SET domain-containing protein (TXR7)
contains Pfam profile PF00856: SET domain
Length = 1423
Score = 36.7 bits (81), Expect = 0.052
Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 11/68 (16%)
Query: 193 GPAAYINHDCRPTC---TFEATDRGKAFVRVLRDIEPGEEITCYYG---ED-----FFGN 241
G A +INH C P C + K F+ R I+ GEEI+ Y ED G
Sbjct: 1338 GIARFINHSCEPNCYTKIISVEGKKKIFIYAKRHIDAGEEISYNYKFPLEDDKIPCNCGA 1397
Query: 242 SNCYCECE 249
N YC CE
Sbjct: 1398 PNVYCFCE 1405
>At5g40340.1 68418.m04894 PWWP domain-containing protein KED,
Nicotiana tabacum, EMBL:AB009883
Length = 1008
Score = 33.9 bits (74), Expect = 0.37
Identities = 40/142 (28%), Positives = 59/142 (41%), Gaps = 17/142 (11%)
Query: 419 DTCIQPSFPKIKNG-------SKVGSDIKYERNVNTPKEEADLPSTLEISNFDIKPDLPI 471
DT +P P NG ++ + + + R TPKE DL + K
Sbjct: 589 DTLDKPCEPSSDNGLGQEELSRELSNAVDFLRLGATPKEMQDLIRVAALGTQYPKDSSSR 648
Query: 472 VNDNEHSSDLNSFVYTD--TH--LGG-KNCDK-KESLTETDLPIATATEDKIEIIESKSK 525
E + SF Y D H LG + DK KE L+E P+ E K + K K
Sbjct: 649 DMVREFMTIYRSFTYHDGANHKFLGSYDSSDKEKEELSEMGKPVTKGKEKK----DKKGK 704
Query: 526 VQKEPDEIDCTVRNENSSLKSG 547
+++ +EI+ T + EN + K G
Sbjct: 705 AKQKAEEIEVTGKEENETDKHG 726
>At5g23970.1 68418.m02817 transferase family protein similar to
acetyl CoA: benzylalcohol acetyltransferase; BEAT
[Clarkia breweri][GI:3170250][PMID:9628024],
deacetylvindoline 4-O-acetyltransferase [Catharanthus
roseus][GI:4091808][PMID:9681034]
Length = 428
Score = 33.9 bits (74), Expect = 0.37
Identities = 14/38 (36%), Positives = 26/38 (68%)
Query: 512 ATEDKIEIIESKSKVQKEPDEIDCTVRNENSSLKSGID 549
++E K+EI E+ SK+QK E++ +RN++ KS ++
Sbjct: 292 SSESKMEIEETVSKLQKTKQELNELIRNDSEDAKSSVE 329
>At1g76710.2 68414.m08928 SET domain-containing protein (ASHH1) low
similarity to huntingtin interacting protein 1 [Homo
sapiens] GI:12697196; contains Pfam profile PF00856: SET
domain; identical to cDNA ASH1-like protein 1 (ASHH1)
partial cds GI:15488417
Length = 492
Score = 33.9 bits (74), Expect = 0.37
Identities = 27/112 (24%), Positives = 47/112 (41%), Gaps = 7/112 (6%)
Query: 195 AAYINHDCRPTC-TFEATDRGKAFVRVL--RDIEPGEEITCYYGEDFFGNSNCYCECETC 251
A +INH CRP C T + G+ V + I P E+ Y +++G + C C
Sbjct: 163 ARFINHSCRPNCETRKWNVLGEVRVGIFAKESISPRTELAYDYNFEWYGGAKVRCLCGAV 222
Query: 252 ERRGKGAFSVESSHNDEQSTRYRFRETDNRINRTKAKQVQKSSNVKNSDKTR 303
G F S ++ T Y + + D+R + K + + S+ ++
Sbjct: 223 ACSG---FLGAKSRGFQEDT-YVWEDGDDRYSVDKIPVYDSAEDELTSEPSK 270
>At1g76710.1 68414.m08927 SET domain-containing protein (ASHH1) low
similarity to huntingtin interacting protein 1 [Homo
sapiens] GI:12697196; contains Pfam profile PF00856: SET
domain; identical to cDNA ASH1-like protein 1 (ASHH1)
partial cds GI:15488417
Length = 492
Score = 33.9 bits (74), Expect = 0.37
Identities = 27/112 (24%), Positives = 47/112 (41%), Gaps = 7/112 (6%)
Query: 195 AAYINHDCRPTC-TFEATDRGKAFVRVL--RDIEPGEEITCYYGEDFFGNSNCYCECETC 251
A +INH CRP C T + G+ V + I P E+ Y +++G + C C
Sbjct: 163 ARFINHSCRPNCETRKWNVLGEVRVGIFAKESISPRTELAYDYNFEWYGGAKVRCLCGAV 222
Query: 252 ERRGKGAFSVESSHNDEQSTRYRFRETDNRINRTKAKQVQKSSNVKNSDKTR 303
G F S ++ T Y + + D+R + K + + S+ ++
Sbjct: 223 ACSG---FLGAKSRGFQEDT-YVWEDGDDRYSVDKIPVYDSAEDELTSEPSK 270
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 33.5 bits (73), Expect = 0.48
Identities = 16/76 (21%), Positives = 38/76 (50%)
Query: 249 ETCERRGKGAFSVESSHNDEQSTRYRFRETDNRINRTKAKQVQKSSNVKNSDKTRISSRQ 308
++ E +GK S E+ R R +E + + N+ ++++V+K ++ D + ++
Sbjct: 744 KSVEAKGKKKESKENKKTKTNENRVRNKEENVQGNKKESEKVEKGEKKESKDAKSVETKD 803
Query: 309 NSSIVSPLSMKEMKQK 324
N + S + E K++
Sbjct: 804 NKKLSSTENRDEAKER 819
>At5g06620.1 68418.m00748 expressed protein
Length = 258
Score = 33.1 bits (72), Expect = 0.64
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 196 AYINHDCRPTCTFEATDRGKAFVRVLRDIEPGEEI-TCY 233
++ NHDC P A + LRD+E GEE+ CY
Sbjct: 189 SFYNHDCDPNAHIIWLHNADARLNTLRDVEEGEELRICY 227
>At4g39190.1 68417.m05549 expressed protein ; expression supported
by MPSS
Length = 277
Score = 33.1 bits (72), Expect = 0.64
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Query: 242 SNCYCECETCERRGKGAFSVESSHNDEQSTRYRFRETDNRINRTKAKQVQKSSNVKNSD- 300
SN E E +G FS + + E+ + E I KAK+ ++ ++ S
Sbjct: 100 SNDLYEDFVLESSRRGGFSQDEMRSGEKQSEAE-NEAKQSITENKAKENEEKQSITESRV 158
Query: 301 KTRISSRQNSSIVSPLSMKEMKQKGLTK 328
K ++ ++ I+S +K+ K + LTK
Sbjct: 159 KKSVTEKKTKRIISEKKVKQSKPEKLTK 186
>At1g77300.1 68414.m09002 SET domain-containing protein similar to
huntingtin interacting protein 1 [Homo sapiens]
GI:12697196; contains Pfam profile PF00856: SET domain
Length = 1759
Score = 33.1 bits (72), Expect = 0.64
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Query: 197 YINHDCRPTCTFEA-TDRGKAFVRV--LRDIEPGEEITCYYG-EDFFGNS--NCYCECET 250
+INH C P C E G+ V + ++D++ G+E+T Y FG + CYC
Sbjct: 1102 FINHSCEPNCRTEKWMVNGEICVGIFSMQDLKKGQELTFDYNYVRVFGAAAKKCYCGSSH 1161
Query: 251 C 251
C
Sbjct: 1162 C 1162
>At1g73730.1 68414.m08537 ethylene-insensitive3-like3 (EIL3)
identical to ethylene-insensitive3-like3 (EIL3)
GB:AF004215 [Arabidopsis thaliana] (Cell 89 (7),
1133-1144 (1997))
Length = 567
Score = 31.5 bits (68), Expect = 2.0
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 478 SSDLNSFVYTDTHLGGKNCDKKESLTETDLPI-ATATEDKIEIIESK----SKVQKE-PD 531
SSD + T+TH G N D+++ + +D TE+ + SK +++QKE P
Sbjct: 290 SSDNGNSNVTETHRRGNNADRRKPVVNSDSDYDVDGTEEASGSVSSKDSRRNQIQKEQPT 349
Query: 532 EIDCTVRNENSSLK 545
I +VR+++ + K
Sbjct: 350 AISHSVRDQDKAEK 363
>At2g23380.1 68415.m02792 curly leaf protein (CURLY LEAF) /
polycomb-group protein identical to polycomb group
[Arabidopsis thaliana] GI:1903019 (curly leaf); contains
Pfam profile PF00856: SET domain
Length = 902
Score = 31.1 bits (67), Expect = 2.6
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 424 PSFPKIK-NGSKVGSDIKYERNVNTPKEEADLPSTLEISNFDIKPDLPIVNDNEHSSDLN 482
PS K K N S K+ ++ N+ K + + E+SN +K D+P+ NE +S+L+
Sbjct: 448 PSDAKHKDNEDATSSSQKHVKSGNSGKSRKN-GTPAEVSNNSVKDDVPVCQSNEVASELD 506
Query: 483 S 483
+
Sbjct: 507 A 507
>At4g15180.1 68417.m02328 SET domain-containing protein contains Pfam
profile PF00856: SET domain
Length = 2326
Score = 30.7 bits (66), Expect = 3.4
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 13/78 (16%)
Query: 195 AAYINHDCRPTCTFEAT---DRGKAFVRVLRDIEPGEEITCYY-----GEDFFGNSNCYC 246
A+ I H CRP C + T + + +R IE GEEIT Y ++ + S C C
Sbjct: 1852 ASRICHSCRPNCEAKVTAVDGHYQIGIYSVRAIEYGEEITFDYNSVTESKEEYEASVCLC 1911
Query: 247 ECETC-----ERRGKGAF 259
+ C G+GAF
Sbjct: 1912 GSQVCRGSYLNLTGEGAF 1929
>At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 428
Score = 30.3 bits (65), Expect = 4.5
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 599 DCPCTPPRRGLKLTLRVKRSPVVEEVMDCGAPAEAPEYEVLRLEGVD-PE 647
DC TPP RG K +KR+P++E +AP + R +G++ PE
Sbjct: 252 DCGKTPPPRGFKCPTPLKRTPLLEVHKSRSFNNQAPSSQ--RNQGIENPE 299
>At5g40450.1 68418.m04905 expressed protein
Length = 2910
Score = 29.9 bits (64), Expect = 6.0
Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 5/108 (4%)
Query: 428 KIKNGSKVGSDIKYERNVNTPKEEADLPSTLEISNFD-IKPDLPIVNDNEHSSDLNSFVY 486
KI+ + G ++ ++ + EE + + E ++ + +K PI + E D+
Sbjct: 1653 KIQKSFETGEIVEAHSSLPSSSEEKEHETVSEKTDDEKVKDAEPIGDMRERGLDIAE--- 1709
Query: 487 TDTHLGGKNCDKKESLTETDLPIATATEDKIEIIESKSKVQKEPDEID 534
THL + D+KE + E +P D+ E + S K + + E +
Sbjct: 1710 -TTHLSLPSVDQKEDVDEIHIPSVALPLDEQEKVTSTEKGETKSSEAE 1756
>At5g05070.1 68418.m00538 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 339
Score = 29.9 bits (64), Expect = 6.0
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 455 PSTLEI-SNFDIKPDLPIV-NDNEHSSDLNSFVYTDTHLGGKNCDKKESLTETDLPIATA 512
PS L++ + + D+ I ND+E+ S+ S V DT +GGK K++S LP+ T
Sbjct: 245 PSQLDLRAMVPEEDDMTIASNDSEYESEYTSSVRYDTEMGGK-LIKRDS--PRKLPLPTR 301
Query: 513 TEDKIEII 520
D I+ I
Sbjct: 302 NLDDIKDI 309
>At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 29.9 bits (64), Expect = 6.0
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 41 PYLGITTHKMNIRYRPLKT-----NKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFS 95
P+LG +K + +++PLKT N + + K F ++ + K +S +A+ + +H
Sbjct: 298 PFLGCKRNKEHKKFQPLKTILCVKNHYKRTHCDKSFTCSRCHTKKFSVIADLKTHEKHCG 357
Query: 96 KNK 98
KNK
Sbjct: 358 KNK 360
>At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 29.9 bits (64), Expect = 6.0
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 41 PYLGITTHKMNIRYRPLKT-----NKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFS 95
P+LG +K + +++PLKT N + + K F ++ + K +S +A+ + +H
Sbjct: 298 PFLGCKRNKEHKKFQPLKTILCVKNHYKRTHCDKSFTCSRCHTKKFSVIADLKTHEKHCG 357
Query: 96 KNK 98
KNK
Sbjct: 358 KNK 360
>At1g21580.1 68414.m02698 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 1696
Score = 29.5 bits (63), Expect = 7.9
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 276 RETDNRINRTKAKQVQKSSNVKNSDKTRI--SSRQN 309
RE N +NRT KQVQK S + + R +SR+N
Sbjct: 301 REASNELNRTPRKQVQKKSALLRLETPRSYKNSREN 336
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.315 0.133 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,828,673
Number of Sequences: 28952
Number of extensions: 661994
Number of successful extensions: 1289
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1275
Number of HSP's gapped (non-prelim): 29
length of query: 697
length of database: 12,070,560
effective HSP length: 86
effective length of query: 611
effective length of database: 9,580,688
effective search space: 5853800368
effective search space used: 5853800368
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 63 (29.5 bits)
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