Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000918-TA|BGIBMGA000918-PA|IPR001232|SKP1 component
(162 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47087-1|CAA87392.1| 163|Homo sapiens RNA polymerase II elongat... 267 1e-71
U33760-1|AAC50241.1| 163|Homo sapiens cyclin A/CDK2-associated ... 267 1e-71
BC065730-1|AAH65730.1| 163|Homo sapiens S-phase kinase-associat... 267 1e-71
BC020798-1|AAH20798.1| 163|Homo sapiens S-phase kinase-associat... 267 1e-71
BC009839-1|AAH09839.1| 163|Homo sapiens S-phase kinase-associat... 267 1e-71
U37558-1|AAA79202.1| 150|Homo sapiens OCP2 protein. 246 3e-65
BC025673-1|AAH25673.1| 160|Homo sapiens S-phase kinase-associat... 244 1e-64
L49176-1|AAB50032.1| 47|Homo sapiens OCP2 protein. 89 9e-18
L49170-1|AAB50264.1| 47|Homo sapiens OCP2 protein. 89 9e-18
L49173-1|AAB50265.1| 47|Homo sapiens OCP2 protein. 82 8e-16
L06237-1|AAA18904.1| 2468|Homo sapiens microtubule-associated pr... 30 3.3
L27428-1|AAB02291.1| 361|Homo sapiens reverse transcriptase pro... 29 7.6
>Z47087-1|CAA87392.1| 163|Homo sapiens RNA polymerase II elongation
factor-like protein protein.
Length = 163
Score = 267 bits (655), Expect = 1e-71
Identities = 130/163 (79%), Positives = 136/163 (83%), Gaps = 1/163 (0%)
Query: 1 MPNIKLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXX-XPLPNVNSAILKKVIQ 59
MP+IKLQSSD E+F VDVEIAK SVTIKT PLPNVN+AILKKVIQ
Sbjct: 1 MPSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQ 60
Query: 60 WATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTC 119
W T+HKDDPP PEDDENKEKRTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTC
Sbjct: 61 WCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTC 120
Query: 120 KTVANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEEK 162
KTVANMIKGKTPEEIRKTFNIKNDFT EE QVRKEN+WCEEK
Sbjct: 121 KTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEEK 163
>U33760-1|AAC50241.1| 163|Homo sapiens cyclin A/CDK2-associated p19
protein.
Length = 163
Score = 267 bits (655), Expect = 1e-71
Identities = 130/163 (79%), Positives = 136/163 (83%), Gaps = 1/163 (0%)
Query: 1 MPNIKLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXX-XPLPNVNSAILKKVIQ 59
MP+IKLQSSD E+F VDVEIAK SVTIKT PLPNVN+AILKKVIQ
Sbjct: 1 MPSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQ 60
Query: 60 WATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTC 119
W T+HKDDPP PEDDENKEKRTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTC
Sbjct: 61 WCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTC 120
Query: 120 KTVANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEEK 162
KTVANMIKGKTPEEIRKTFNIKNDFT EE QVRKEN+WCEEK
Sbjct: 121 KTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEEK 163
>BC065730-1|AAH65730.1| 163|Homo sapiens S-phase kinase-associated
protein 1A (p19A) protein.
Length = 163
Score = 267 bits (655), Expect = 1e-71
Identities = 130/163 (79%), Positives = 136/163 (83%), Gaps = 1/163 (0%)
Query: 1 MPNIKLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXX-XPLPNVNSAILKKVIQ 59
MP+IKLQSSD E+F VDVEIAK SVTIKT PLPNVN+AILKKVIQ
Sbjct: 1 MPSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQ 60
Query: 60 WATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTC 119
W T+HKDDPP PEDDENKEKRTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTC
Sbjct: 61 WCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTC 120
Query: 120 KTVANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEEK 162
KTVANMIKGKTPEEIRKTFNIKNDFT EE QVRKEN+WCEEK
Sbjct: 121 KTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEEK 163
>BC020798-1|AAH20798.1| 163|Homo sapiens S-phase kinase-associated
protein 1A (p19A) protein.
Length = 163
Score = 267 bits (655), Expect = 1e-71
Identities = 130/163 (79%), Positives = 136/163 (83%), Gaps = 1/163 (0%)
Query: 1 MPNIKLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXX-XPLPNVNSAILKKVIQ 59
MP+IKLQSSD E+F VDVEIAK SVTIKT PLPNVN+AILKKVIQ
Sbjct: 1 MPSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQ 60
Query: 60 WATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTC 119
W T+HKDDPP PEDDENKEKRTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTC
Sbjct: 61 WCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTC 120
Query: 120 KTVANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEEK 162
KTVANMIKGKTPEEIRKTFNIKNDFT EE QVRKEN+WCEEK
Sbjct: 121 KTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEEK 163
>BC009839-1|AAH09839.1| 163|Homo sapiens S-phase kinase-associated
protein 1A (p19A) protein.
Length = 163
Score = 267 bits (655), Expect = 1e-71
Identities = 130/163 (79%), Positives = 136/163 (83%), Gaps = 1/163 (0%)
Query: 1 MPNIKLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXX-XPLPNVNSAILKKVIQ 59
MP+IKLQSSD E+F VDVEIAK SVTIKT PLPNVN+AILKKVIQ
Sbjct: 1 MPSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQ 60
Query: 60 WATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTC 119
W T+HKDDPP PEDDENKEKRTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTC
Sbjct: 61 WCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTC 120
Query: 120 KTVANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEEK 162
KTVANMIKGKTPEEIRKTFNIKNDFT EE QVRKEN+WCEEK
Sbjct: 121 KTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEEK 163
>U37558-1|AAA79202.1| 150|Homo sapiens OCP2 protein.
Length = 150
Score = 246 bits (602), Expect = 3e-65
Identities = 120/150 (80%), Positives = 124/150 (82%), Gaps = 1/150 (0%)
Query: 14 FVVDVEIAKCSVTIKTXXXXXXXXXXXXXX-XPLPNVNSAILKKVIQWATYHKDDPPLPE 72
F VDVEIAK SVTIKT PLPNVN+AILKKVIQW T+HKDDPP PE
Sbjct: 1 FEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPE 60
Query: 73 DDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPE 132
DDENKEKRTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPE
Sbjct: 61 DDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPE 120
Query: 133 EIRKTFNIKNDFTAAEEDQVRKENEWCEEK 162
EIRKTFNIKNDFT EE QVRKEN+WCEEK
Sbjct: 121 EIRKTFNIKNDFTEEEEAQVRKENQWCEEK 150
>BC025673-1|AAH25673.1| 160|Homo sapiens S-phase kinase-associated
protein 1A (p19A) protein.
Length = 160
Score = 244 bits (597), Expect = 1e-64
Identities = 121/153 (79%), Positives = 126/153 (82%), Gaps = 1/153 (0%)
Query: 1 MPNIKLQSSDNEVFVVDVEIAKCSVTIKTXXXXXXXXXXXXXX-XPLPNVNSAILKKVIQ 59
MP+IKLQSSD E+F VDVEIAK SVTIKT PLPNVN+AILKKVIQ
Sbjct: 1 MPSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQ 60
Query: 60 WATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTC 119
W T+HKDDPP PEDDENKEKRTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTC
Sbjct: 61 WCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTC 120
Query: 120 KTVANMIKGKTPEEIRKTFNIKNDFTAAEEDQV 152
KTVANMIKGKTPEEIRKTFNIKNDFT EE QV
Sbjct: 121 KTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQV 153
>L49176-1|AAB50032.1| 47|Homo sapiens OCP2 protein.
Length = 47
Score = 88.6 bits (210), Expect = 9e-18
Identities = 41/47 (87%), Positives = 43/47 (91%)
Query: 76 NKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 122
NKEK+TDDI WD +FLKV QGTLFELILAANYLDIKGLLDVTCKTV
Sbjct: 1 NKEKQTDDIPVWDQEFLKVAQGTLFELILAANYLDIKGLLDVTCKTV 47
>L49170-1|AAB50264.1| 47|Homo sapiens OCP2 protein.
Length = 47
Score = 88.6 bits (210), Expect = 9e-18
Identities = 41/47 (87%), Positives = 43/47 (91%)
Query: 76 NKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 122
NKEK+TDDI WD +FLKV QGTLFELILAANYLDIKGLLDVTCKTV
Sbjct: 1 NKEKQTDDIPVWDQEFLKVAQGTLFELILAANYLDIKGLLDVTCKTV 47
>L49173-1|AAB50265.1| 47|Homo sapiens OCP2 protein.
Length = 47
Score = 82.2 bits (194), Expect = 8e-16
Identities = 37/47 (78%), Positives = 41/47 (87%)
Query: 76 NKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 122
N+EKRTD I +WD FLK+D GTLFE+ILAANYLDIKGLLDV CKTV
Sbjct: 1 NEEKRTDAIPAWDQKFLKIDPGTLFEVILAANYLDIKGLLDVPCKTV 47
>L06237-1|AAA18904.1| 2468|Homo sapiens microtubule-associated protein
1B protein.
Length = 2468
Score = 30.3 bits (65), Expect = 3.3
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 62 TY-HKDDPPLPEDDENKEKRTDDISSWDADFLKVDQ 96
TY H D PP P D + R D+S D + L ++Q
Sbjct: 2194 TYKHMDPPPAPVQDRSPSPRHPDVSMVDPEALAIEQ 2229
>L27428-1|AAB02291.1| 361|Homo sapiens reverse transcriptase
protein.
Length = 361
Score = 29.1 bits (62), Expect = 7.6
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 96 QGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKE 155
Q T +E I A YL KGLL C + + K KT I+K N + E+ K+
Sbjct: 118 QATEWEKIFAT-YLSDKGLLSGICNELKQIYKKKTNNPIKKWAKDMNRHFSKEDIYAAKK 176
Query: 156 N 156
+
Sbjct: 177 H 177
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.313 0.132 0.384
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,216,498
Number of Sequences: 224733
Number of extensions: 811257
Number of successful extensions: 1828
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1810
Number of HSP's gapped (non-prelim): 12
length of query: 162
length of database: 73,234,838
effective HSP length: 84
effective length of query: 78
effective length of database: 54,357,266
effective search space: 4239866748
effective search space used: 4239866748
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 61 (28.7 bits)
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