Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000917-TA|BGIBMGA000917-PA|undefined
(147 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC12G12.03 |cip2||RNA-binding protein Cip2|Schizosaccharomyces... 30 0.13
SPCC553.01c ||SPCC736.01c|meiotic chromosome segregation protein... 30 0.17
SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 29 0.38
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 28 0.51
SPBP4H10.04 |ppb1||calcineurin catalytic subunit Ppb1|Schizosacc... 27 0.88
SPCC1795.08c |||histone acetyltransferase complex subunit |Schiz... 26 2.0
SPBC8D2.06 |||isoleucine-tRNA ligase |Schizosaccharomyces pombe|... 25 6.2
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 25 6.2
SPBC646.05c |erg9||squalene synthase Erg9|Schizosaccharomyces po... 24 8.2
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 24 8.2
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 24 8.2
>SPAC12G12.03 |cip2||RNA-binding protein Cip2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 576
Score = 30.3 bits (65), Expect = 0.13
Identities = 16/51 (31%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 12 TITQDINVPEIIFSTKDQIKHDWQQDRIPPAKRKRVETDSPQTEKVKKKPN 62
T+ Q +N EI T +++ +W++ ++PPA+R+RVE + V+++ N
Sbjct: 288 TVVQVLNGYEI---TGRRLRVEWKR-QLPPAERERVERGKQEKRAVEERKN 334
>SPCC553.01c ||SPCC736.01c|meiotic chromosome segregation
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 715
Score = 29.9 bits (64), Expect = 0.17
Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 5 ARSNSLGTITQDINVPEIIFSTKDQIKHDWQQDRIPPAKRKRVETDSPQTEKVKKKPNTT 64
++S ++ + NVP S+ DQ++ ++ +P A +ETDS ++ + P
Sbjct: 563 SKSRNVSVFSSPFNVPSFTVSSSDQVQK--KKGNVPNA----IETDSSPSDTISSSPTVR 616
Query: 65 TYAIT-TKNQ 73
++ +KNQ
Sbjct: 617 AVNLSPSKNQ 626
>SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 860
Score = 28.7 bits (61), Expect = 0.38
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 4 KARSNSLGTITQD-INVPEIIF----STKDQIKHDWQQDRIPPAKRKRVETDSPQTEKVK 58
+A N IT + +++PE ++ ++ + + D P +R ++ + PQ K K
Sbjct: 392 EASINEHSNITDEAVSLPEPVYPNAPTSAVSVHNPTISDEAEPTERAFLKKEKPQISKEK 451
Query: 59 KKPNTT 64
K PN T
Sbjct: 452 KNPNVT 457
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 28.3 bits (60), Expect = 0.51
Identities = 16/71 (22%), Positives = 30/71 (42%)
Query: 15 QDINVPEIIFSTKDQIKHDWQQDRIPPAKRKRVETDSPQTEKVKKKPNTTTYAITTKNQF 74
+D++ ++ + K + Q I + SP+ EK++ + IT
Sbjct: 154 EDLSKEDLETTLKGDENYSSSQKEIYDNDETIPKPPSPEVEKIETSTSVENAYITNSQYN 213
Query: 75 DILDSEESTTD 85
D LD E+ T+D
Sbjct: 214 DTLDMEDQTSD 224
>SPBP4H10.04 |ppb1||calcineurin catalytic subunit
Ppb1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 554
Score = 27.5 bits (58), Expect = 0.88
Identities = 15/47 (31%), Positives = 21/47 (44%)
Query: 19 VPEIIFSTKDQIKHDWQQDRIPPAKRKRVETDSPQTEKVKKKPNTTT 65
+ I S D K D Q +R+PP+ +R TD E+V T
Sbjct: 492 IKNAINSFDDARKLDIQNERLPPSNSRRRSTDLKAFEEVMNSSEDDT 538
>SPCC1795.08c |||histone acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 985
Score = 26.2 bits (55), Expect = 2.0
Identities = 11/44 (25%), Positives = 25/44 (56%)
Query: 22 IIFSTKDQIKHDWQQDRIPPAKRKRVETDSPQTEKVKKKPNTTT 65
++ +T+ + + D ++ + K V TD ++++VKKK + T
Sbjct: 215 VVEATEKEHEEDGNEENVTVTKPVEVATDQVESKEVKKKEVSET 258
>SPBC8D2.06 |||isoleucine-tRNA ligase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1064
Score = 24.6 bits (51), Expect = 6.2
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 9/74 (12%)
Query: 13 ITQDINVPEIIFSTKDQ---IKHDWQQDRIPPAKRKRVETDSPQTEKVKKKPNTTTYAIT 69
I +++NV E++F++ ++ + + Q D P K++ D + +K PN T+ +
Sbjct: 865 IAEELNVREVVFTSNEEKYGVVYSVQADW--PVLGKKLRKDMARVKKA--LPNVTSEEVK 920
Query: 70 --TKNQFDILDSEE 81
KN+ +LD E
Sbjct: 921 EFQKNKKMVLDGIE 934
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 24.6 bits (51), Expect = 6.2
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Query: 32 HDWQQDRIPPAKRKRVETDSPQTEKVKKKPNTTTYAITTKNQFDILDSEESTTDN 86
HDW+ D P + KR D K PN+ + + +D E+ T DN
Sbjct: 171 HDWEPDDDPYTEHKRRRADC--VFFTWKDPNSLSPTKLSFLSTSNIDPEDLTEDN 223
>SPBC646.05c |erg9||squalene synthase Erg9|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 460
Score = 24.2 bits (50), Expect = 8.2
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 3 TKARSNSLGTITQDINVPEIIFSTKDQIKHDWQQD 37
++A SNSLG Q +N+ D +H W ++
Sbjct: 204 SQAISNSLGLFLQKVNIIRDYREDFDDNRHFWPRE 238
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 24.2 bits (50), Expect = 8.2
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 37 DRIPPAKRKRVETDSPQTEKVKKKPNTTTYAITTKNQFD 75
DR+ K D +T +++ K + +YA + +N D
Sbjct: 514 DRMVSEAEKYKAEDEAETSRIQAKNHLESYAYSLRNSLD 552
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 24.2 bits (50), Expect = 8.2
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 39 IPPAKRKRVETDSPQTEKVKKKPNTTTYA 67
+PPA R D+ + E+ +P+ TYA
Sbjct: 152 VPPANRVWYPDDAAELEETGLRPSRFTYA 180
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.130 0.365
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 634,745
Number of Sequences: 5004
Number of extensions: 23335
Number of successful extensions: 78
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 70
Number of HSP's gapped (non-prelim): 11
length of query: 147
length of database: 2,362,478
effective HSP length: 67
effective length of query: 80
effective length of database: 2,027,210
effective search space: 162176800
effective search space used: 162176800
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 50 (24.2 bits)
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