Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000916-TA|BGIBMGA000916-PA|undefined
         (95 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    23   0.55 
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    23   0.55 
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   2.2  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   2.9  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    20   5.1  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    20   5.1  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 0.55
 Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 2/85 (2%)

Query: 12  LYSLKLKNYLAPIYTKLLHASIGLLTFVLGVITILLG-LFTRWWSFGDPIRYTNFTLVLA 70
           L  L  K YL      +   S+ LL FV+ ++   LG L++ W      + Y        
Sbjct: 112 LTELGQKKYLEKRNRHIFRTSV-LLIFVMHLMFDTLGGLYSTWSKKSKQVEYFLIHWYPR 170

Query: 71  IMLLTILRPSLKIYFRLKERIENTN 95
           +++ T L     I   LK R E  N
Sbjct: 171 MLISTKLLAHFLILTVLKARFEAIN 195


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 23.0 bits (47), Expect = 0.55
 Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 2/85 (2%)

Query: 12  LYSLKLKNYLAPIYTKLLHASIGLLTFVLGVITILLG-LFTRWWSFGDPIRYTNFTLVLA 70
           L  L  K YL      +   S+ LL FV+ ++   LG L++ W      + Y        
Sbjct: 112 LTELGQKKYLEKRNRHIFRTSV-LLIFVMHLMFDTLGGLYSTWSKKSKQVEYFLIHWYPR 170

Query: 71  IMLLTILRPSLKIYFRLKERIENTN 95
           +++ T L     I   LK R E  N
Sbjct: 171 MLISTKLLAHFLILTVLKARFEAIN 195


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 2.2
 Identities = 10/14 (71%), Positives = 10/14 (71%)

Query: 14  SLKLKNYLAPIYTK 27
           S KLKN  API TK
Sbjct: 140 SSKLKNKSAPILTK 153


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
          vasopressin receptor protein.
          Length = 403

 Score = 20.6 bits (41), Expect = 2.9
 Identities = 10/21 (47%), Positives = 14/21 (66%)

Query: 32 SIGLLTFVLGVITILLGLFTR 52
          +I  L  V+G  T+LL L+TR
Sbjct: 43 AIIFLVTVIGNSTVLLALWTR 63


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 19.8 bits (39), Expect = 5.1
 Identities = 8/22 (36%), Positives = 13/22 (59%)

Query: 17  LKNYLAPIYTKLLHASIGLLTF 38
           ++N+  P  TK + A +GL  F
Sbjct: 523 IRNFPVPQKTKHVRAFLGLCNF 544


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 19.8 bits (39), Expect = 5.1
 Identities = 9/29 (31%), Positives = 17/29 (58%)

Query: 67  LVLAIMLLTILRPSLKIYFRLKERIENTN 95
           L+ +  ++TIL+ +    F LKE ++  N
Sbjct: 85  LLYSKQIVTILKKTKSNIFILKESVDTFN 113


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.331    0.147    0.443 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,772
Number of Sequences: 317
Number of extensions: 858
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 95
length of database: 114,650
effective HSP length: 48
effective length of query: 47
effective length of database: 99,434
effective search space:  4673398
effective search space used:  4673398
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (20.4 bits)
S2: 37 (19.0 bits)