GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000916-TA|BGIBMGA000916-PA|undefined
         (95 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    23   1.5  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    23   1.9  
AY313948-1|AAP76391.1|  424|Anopheles gambiae cytochrome P450 CY...    23   2.5  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            22   3.4  

>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 7/64 (10%)

Query: 2   LVTMMGGLGALYSLKLKNYLAPIYTKLLHASIGLLTFVLGV--ITILLGLFTRWWSFGDP 59
           L+ ++G +G + S+     L    TKL   S       LG+     L+GLF  W SF   
Sbjct: 48  LLVVVGSIGNILSV-----LVFFNTKLKKLSSSYYLAALGISDTCYLVGLFVTWLSFFQV 102

Query: 60  IRYT 63
             YT
Sbjct: 103 HIYT 106


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 12  LYSLKLKNYLAPIYTKL-LHASIGLLTFVLGVITILLGLFTRWWSFGDP 59
           ++ L +   L P    L L A   L TF++  ++IL+ +    W+F  P
Sbjct: 276 VFLLLVSKILPPTSLVLPLIAKYLLFTFIMNTVSILVTVIIINWNFRGP 324


>AY313948-1|AAP76391.1|  424|Anopheles gambiae cytochrome P450
           CYP6M4 protein.
          Length = 424

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 9/30 (30%), Positives = 17/30 (56%)

Query: 13  YSLKLKNYLAPIYTKLLHASIGLLTFVLGV 42
           + +  K+Y+ P  T +L A   ++  VLG+
Sbjct: 314 FRITAKDYIVPGTTSVLEAGTSVMIPVLGI 343


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/20 (40%), Positives = 14/20 (70%)

Query: 72   MLLTILRPSLKIYFRLKERI 91
            + L+ + PS   Y++L+ERI
Sbjct: 3241 VFLSTVNPSRTFYYQLRERI 3260


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.331    0.147    0.443 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,535
Number of Sequences: 2123
Number of extensions: 2927
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 4
length of query: 95
length of database: 516,269
effective HSP length: 54
effective length of query: 41
effective length of database: 401,627
effective search space: 16466707
effective search space used: 16466707
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.9 bits)
S2: 42 (21.0 bits)