GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000915-TA|BGIBMGA000915-PA|IPR001042|Peptidase A11B, Ty1
A and B
         (327 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    28   0.11 
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    28   0.11 
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    28   0.11 
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   4.0  
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    22   5.3  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   9.3  

>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 27.9 bits (59), Expect = 0.11
 Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 7/99 (7%)

Query: 119 NDANHLQNDIAKTDRQLKNTDRLIEMQYGNFNTTQNENDKKLNQMQEQVDRLETLETEQA 178
           ND   L+  IAK++++   TD L++         + E      + Q+ V++L T + E A
Sbjct: 5   NDEKALEQ-IAKSEKEPSLTD-LVQRWLERTPGLELEGFNFWGKYQKAVEKLLTEQKELA 62

Query: 179 QKKANETIEDVEALRLRLSHLQKDILKIESDAEQVKHEA 217
           +K+  ET++     R +L+ L+K     ES  +   HEA
Sbjct: 63  EKEEAETLK-----RYKLNDLEKRREVYESIFKVEVHEA 96


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 27.9 bits (59), Expect = 0.11
 Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 7/99 (7%)

Query: 119 NDANHLQNDIAKTDRQLKNTDRLIEMQYGNFNTTQNENDKKLNQMQEQVDRLETLETEQA 178
           ND   L+  IAK++++   TD L++         + E      + Q+ V++L T + E A
Sbjct: 165 NDEKALEQ-IAKSEKEPSLTD-LVQRWLERTPGLELEGFNFWGKYQKAVEKLLTEQKELA 222

Query: 179 QKKANETIEDVEALRLRLSHLQKDILKIESDAEQVKHEA 217
           +K+  ET++     R +L+ L+K     ES  +   HEA
Sbjct: 223 EKEEAETLK-----RYKLNDLEKRREVYESIFKVEVHEA 256


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 27.9 bits (59), Expect = 0.11
 Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 7/99 (7%)

Query: 119 NDANHLQNDIAKTDRQLKNTDRLIEMQYGNFNTTQNENDKKLNQMQEQVDRLETLETEQA 178
           ND   L+  IAK++++   TD L++         + E      + Q+ V++L T + E A
Sbjct: 165 NDEKALEQ-IAKSEKEPSLTD-LVQRWLERTPGLELEGFNFWGKYQKAVEKLLTEQKELA 222

Query: 179 QKKANETIEDVEALRLRLSHLQKDILKIESDAEQVKHEA 217
           +K+  ET++     R +L+ L+K     ES  +   HEA
Sbjct: 223 EKEEAETLK-----RYKLNDLEKRREVYESIFKVEVHEA 256


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 22  EKEGQSTIPDLLSNITNIQKLITKTEQKIKNSN 54
           E+E + T   + SN+  +Q+   K E    N+N
Sbjct: 433 EEEDEETSTTVFSNVEVVQEEAKKEESDSNNNN 465


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 4/49 (8%)

Query: 201 KDILKIESDAEQVKHEADDVVNRAEGAEL-KARQLRQNF---KQTNKSL 245
           K + K+  DA+  K + D++V       + K +QL ++F   K+ N+ +
Sbjct: 142 KPVKKVLEDADMTKDQIDEIVLVGGSTRIPKIQQLIKDFFDGKELNRGI 190


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 11/40 (27%), Positives = 19/40 (47%)

Query: 277 LKLLANMEELYNDHNEQLNTLENEIAVLNTQMNYYLSEIT 316
           +K+L  +EEL   +N   N  +N    L +    +L + T
Sbjct: 38  IKILNRLEELDLSNNRLRNVPDNSFHFLRSLKKVHLQDNT 77


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.308    0.124    0.317 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,191
Number of Sequences: 317
Number of extensions: 2217
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 6
length of query: 327
length of database: 114,650
effective HSP length: 57
effective length of query: 270
effective length of database: 96,581
effective search space: 26076870
effective search space used: 26076870
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 43 (21.4 bits)