GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000914-TA|BGIBMGA000914-PA|undefined
         (276 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118673-1|AAM50533.1| 1436|Drosophila melanogaster AT03687p pro...    29   5.3  
AE014134-2538|AAF53422.1| 1801|Drosophila melanogaster CG3491-PA...    29   5.3  

>AY118673-1|AAM50533.1| 1436|Drosophila melanogaster AT03687p
           protein.
          Length = 1436

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)

Query: 131 WLGPDAPDAYIKELCHRVRS-ALERFETLTDEMPKEVDLRSFLRPSRVVWALLVRAAEGR 189
           WLG       + + CH+ ++ +L      T      +DL+  L  +RVV+A    A+E R
Sbjct: 538 WLGKKFEGVIVFDECHKAKNLSLMNVGKSTKTGTTVLDLQKLLPNARVVYASATGASEPR 597

Query: 190 N 190
           N
Sbjct: 598 N 598


>AE014134-2538|AAF53422.1| 1801|Drosophila melanogaster CG3491-PA
           protein.
          Length = 1801

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)

Query: 131 WLGPDAPDAYIKELCHRVRS-ALERFETLTDEMPKEVDLRSFLRPSRVVWALLVRAAEGR 189
           WLG       + + CH+ ++ +L      T      +DL+  L  +RVV+A    A+E R
Sbjct: 903 WLGKKFEGVIVFDECHKAKNLSLMNVGKSTKTGTTVLDLQKLLPNARVVYASATGASEPR 962

Query: 190 N 190
           N
Sbjct: 963 N 963


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.321    0.135    0.430 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,707,902
Number of Sequences: 52641
Number of extensions: 405847
Number of successful extensions: 795
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 795
Number of HSP's gapped (non-prelim): 2
length of query: 276
length of database: 24,830,863
effective HSP length: 84
effective length of query: 192
effective length of database: 20,409,019
effective search space: 3918531648
effective search space used: 3918531648
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 61 (28.7 bits)