GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000912-TA|BGIBMGA000912-PA|IPR011704|ATPase associated
with various cellular activities, AAA-5
         (255 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    27   0.70 
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    27   0.70 
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    27   0.70 

>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 26.6 bits (56), Expect = 0.70
 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 5/65 (7%)

Query: 138 LTKLYNVAVVRQILTQFEYLVQTAN---AISTQPGPEEMVICAIQRSVVDLLKEAAVPSF 194
           LT L+ V +V  + T F YL+  A+   +++   GP  ++   I       L  A+VP++
Sbjct: 552 LTTLFIVTLVANVSTSFGYLISCASSSISMALSVGPPVVIPFLIFGGF--FLNSASVPAY 609

Query: 195 YDEIS 199
           +  +S
Sbjct: 610 FKYLS 614


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 26.6 bits (56), Expect = 0.70
 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 5/65 (7%)

Query: 138 LTKLYNVAVVRQILTQFEYLVQTAN---AISTQPGPEEMVICAIQRSVVDLLKEAAVPSF 194
           LT L+ V +V  + T F YL+  A+   +++   GP  ++   I       L  A+VP++
Sbjct: 552 LTTLFIVTLVANVSTSFGYLISCASSSISMALSVGPPVVIPFLIFGGF--FLNSASVPAY 609

Query: 195 YDEIS 199
           +  +S
Sbjct: 610 FKYLS 614


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 26.6 bits (56), Expect = 0.70
 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 5/65 (7%)

Query: 138 LTKLYNVAVVRQILTQFEYLVQTAN---AISTQPGPEEMVICAIQRSVVDLLKEAAVPSF 194
           LT L+ V +V  + T F YL+  A+   +++   GP  ++   I       L  A+VP++
Sbjct: 530 LTTLFIVTLVANVSTSFGYLISCASSSISMALSVGPPVVIPFLIFGGF--FLNSASVPAY 587

Query: 195 YDEIS 199
           +  +S
Sbjct: 588 FKYLS 592


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.133    0.408 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 247,837
Number of Sequences: 2123
Number of extensions: 9306
Number of successful extensions: 25
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 22
Number of HSP's gapped (non-prelim): 3
length of query: 255
length of database: 516,269
effective HSP length: 63
effective length of query: 192
effective length of database: 382,520
effective search space: 73443840
effective search space used: 73443840
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 47 (23.0 bits)