GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000909-TA|BGIBMGA000909-PA|IPR009050|Globin-like,
IPR013594|Dynein heavy chain, N-terminal region 1, IPR013602|Dynein
heavy chain, N-terminal region 2
         (1237 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    24   7.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   7.4  
EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic hor...    23   9.8  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    23   9.8  

>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 23.8 bits (49), Expect = 7.4
 Identities = 12/54 (22%), Positives = 22/54 (40%)

Query: 398 SGCPELTNLATQLLKDLKEMYVQLHEEWCRELQAQAKNGSLQMSTDKPVVEFSG 451
           SGC + T    +  + +    +    +W  EL+A+     +     K V+E  G
Sbjct: 73  SGCSKCTEKQKEGSRKIIHYLIDNKRDWWNELEAKYDKDGVYRQKYKDVIEKEG 126


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 7.4
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 3/37 (8%)

Query: 1178 TKRPTPIIKDFKEIMNKVEEQQWIV-CSVSGGGSPEA 1213
            TK+P  +   + EI N++  Q+WIV    SG   P A
Sbjct: 898  TKQPGMLA--YYEICNRIRNQRWIVNRDTSGATGPFA 932


>EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic hormone
            2 protein.
          Length = 68

 Score = 23.4 bits (48), Expect = 9.8
 Identities = 10/35 (28%), Positives = 19/35 (54%)

Query: 971  EEMADRCRTVFEAIASWKKFITDREELVKECEKFN 1005
            E  ++RC+   + I    K I +  + + +CEKF+
Sbjct: 33   EGESNRCKESVDTIMLIYKIIQNEAQKLVDCEKFS 67


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 23.4 bits (48), Expect = 9.8
 Identities = 8/24 (33%), Positives = 14/24 (58%)

Query: 937 LNGEWENLNTSVEAFVSRWTQSKA 960
           L+GEW+  N +  + ++ W  S A
Sbjct: 222 LDGEWQRDNLNANSSITHWILSGA 245


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.318    0.131    0.393 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 270,650
Number of Sequences: 317
Number of extensions: 11041
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 20
Number of HSP's gapped (non-prelim): 4
length of query: 1237
length of database: 114,650
effective HSP length: 65
effective length of query: 1172
effective length of database: 94,045
effective search space: 110220740
effective search space used: 110220740
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 48 (23.4 bits)