Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000909-TA|BGIBMGA000909-PA|IPR009050|Globin-like,
IPR013594|Dynein heavy chain, N-terminal region 1, IPR013602|Dynein
heavy chain, N-terminal region 2
(1237 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical pr... 354 2e-97
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 52 3e-06
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 52 3e-06
AF016684-15|AAB66214.1| 543|Caenorhabditis elegans Hypothetical... 39 0.019
Z81096-8|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical pr... 35 0.42
Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical pr... 35 0.42
AL032626-20|CAD45605.1| 445|Caenorhabditis elegans Hypothetical... 33 0.96
AL032626-19|CAA21537.1| 508|Caenorhabditis elegans Hypothetical... 33 0.96
AF109378-1|AAD19958.1| 508|Caenorhabditis elegans glutamic acid... 33 0.96
U20862-1|AAK29863.2| 253|Caenorhabditis elegans Hypothetical pr... 33 1.3
Z66565-5|CAA91482.2| 766|Caenorhabditis elegans Hypothetical pr... 32 2.9
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 32 2.9
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 32 2.9
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 32 2.9
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 32 2.9
U41038-5|AAK29710.4| 519|Caenorhabditis elegans Hypothetical pr... 31 5.1
AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric c... 31 5.1
AF038613-11|AAB92054.2| 836|Caenorhabditis elegans Mammalian el... 31 5.1
Z81015-5|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical pr... 31 6.8
U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 31 6.8
L23646-13|AAA28035.2| 2175|Caenorhabditis elegans Hypothetical p... 31 6.8
L23646-12|AAL02516.1| 2186|Caenorhabditis elegans Hypothetical p... 31 6.8
AF016683-10|AAB66198.1| 405|Caenorhabditis elegans Hypothetical... 31 6.8
Z81531-10|CAE17807.1| 367|Caenorhabditis elegans Hypothetical p... 30 8.9
AC024753-2|AAF60457.2| 561|Caenorhabditis elegans Hypothetical ... 30 8.9
>Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical protein
F18C12.1 protein.
Length = 4171
Score = 354 bits (871), Expect = 2e-97
Identities = 243/988 (24%), Positives = 458/988 (46%), Gaps = 45/988 (4%)
Query: 273 PAWQAAVSLFSTSLRQVEVKVAEKLKPRLH--NTSTKQMLYEFLRYEALIERPYVKQTLN 330
P W++ + + S+ + LK RL N ++ ++ + ++ + R +K+ L
Sbjct: 344 PNWKSRLLVSERSIEGTIDRTLPILKQRLAPANGDSQSIVLSLEKLKSFLCRSNIKEKLQ 403
Query: 331 NELEIFATSLVAMLKDIKNQIDSDETDVKMYQPPEMSPLVHRVQWAKQMEAKVKEIKICA 390
+E E+F LV+ML + + V ++ + R+ W +Q ++++ I+ +
Sbjct: 404 HEREMFLNRLVSMLSQKNQEFNEKSLQVDAKNFQFLTEVAARIVWIRQQTSQMESIRSLS 463
Query: 391 DKHLSEFSGCPELTNLATQLLKDLKEMYVQLHEEWCRELQA--QAKNGSLQMSTDKPVVE 448
L+ S + + ++ L+ + ++WCRE KN ++ + T ++
Sbjct: 464 KMMLNNISNYSAFASKLDEFIEKLQYAEKECFDDWCRETVGLIDNKNETINLETTGKIMY 523
Query: 449 FSGPNKMMVVNFNPRLVWXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXQQVASF 507
N+ + VN++ RL+ +Q+A F
Sbjct: 524 LEASNRELNVNYSDRLLRLLKEVRQLISLGFNIPSKIMSCANNGEKYYRFGVILKQIAHF 583
Query: 508 HNTLGERMIPSTKPMMLQAALDLSAIVQDQKT-------VYWDDVEQLANYTEKLKKMVL 560
+NT+ ++MIPS + +ML+ A+ +V +K V W+D +QL + +L+
Sbjct: 584 YNTIDQQMIPSQQSLMLEEAIAFEKLVIPRKDASNSASKVTWNDPKQLEEFIVQLQSAEQ 643
Query: 561 KLEGQNTYLTSQHMAIKDIVMKLINTELLAKLSEWKKGVKDIRSII---ETVEGNGYRNT 617
KL +N L + HM + ++V KL++ ++ + +EWK+ + IRS + E V G N
Sbjct: 644 KLSNRNRRLRNVHMELIEMVEKLMDLNIVKQNNEWKEIILKIRSKMKEEEIVHGAVKNNM 703
Query: 618 ELWRSHWDWQLYKALECQYIKTLLSLDKHFAHIKVDLVLRGHKIRVQPPIEEIRVQHYHQ 677
+ W HWD+QLYKAL QY + S+ + I V LV KI+++P IEEIR ++Y +
Sbjct: 704 KPWLIHWDFQLYKALLIQYEWGIESIQSQLSTISVSLVFADQKIQLRPTIEEIRSKYYKE 763
Query: 678 LRRLVSLPAQFVGVQNNITERQSIFADIVDKHSWLGNKAVKKLEQVLSSLEQCGRQWTRR 737
L R + +P +F GVQ + +A ++++ L +K EQ++ +E C +
Sbjct: 764 LCRFLRIPDKFRGVQED-ENSTKFYAQMIERSMHLLPTVYEKAEQLMMKVETCDAIFVDW 822
Query: 738 AALACVPDLRALCTHSLAEPEHWELNFKACKAYGQAVAKMTFDDEKIEWLSVGTATLRRE 797
++ V DL L +L WE FK K + ++ + K E + V TA ++
Sbjct: 823 LVISQV-DLEELIEENLKTAADWESQFKILKGKAREAERLP-HELKFECILVSTAGVKSA 880
Query: 798 FEAQARTLWACLISSLQTSCRTDASEVDAFVANVTVILNNKTLPNNSKDLTELSAKQHAL 857
E + L+ L +L+ S T + + F++ +LN T+P + ++ E +AK
Sbjct: 881 IEDAIQRLYDALSWTLRHSISTTSQSISTFLSQAIEVLN--TVPQSIDEIAEANAKHVIF 938
Query: 858 QEKMPERGGKDSSKNPCNQRISCQMEKIVAALKKKGNMLRTWGGDTSIDGTIKEWQKTRE 917
E R K+ K ME+ + L+ G ID + W +
Sbjct: 939 AEN--NRRLKEEWK---------VMEEQLTLLRSVAGT-----GMEQIDNLEQTWDRFEL 982
Query: 918 LMLNHQQMFENQAEIVKASLNGEWENLNTSVEAFVSRWTQSKARLDAAHDVHYEEMADRC 977
++ HQ M ++Q E++K+++ + + E +RW Q K R DA EEM
Sbjct: 983 MLDGHQSMIKDQVEVLKSNVETSVKGMKDEAEKLKARWEQFKPRNDALQG-DREEMLKAI 1041
Query: 978 RTVFEAIASWKKFITDREELVKECEKFNMKTDIADVWQQGDKLFENYETLWTVFEKFNEE 1037
+ + E W++ RE++ KEC +F ++ D+ + D+ + +E W ++E FN E
Sbjct: 1042 QFIKEKRVQWQQLSDGREKIEKECGQFGLEPPKMDIIDEIDEDIKQFEDNWLIYEMFNNE 1101
Query: 1038 YESIAEQSWIVFQKKLHLLDEFTTKWSTRLE---PYTVVTLFIQQELDRYSDITPLLKYL 1094
++++++ WIVF+ K +L DEF KW +L+ T +++ + ++++ + +++ LK+
Sbjct: 1102 LDTMSQEEWIVFRSKTYLFDEFLQKWMEKLKGTGSQTHMSVRLMKDVEHFKEVSSALKFC 1161
Query: 1095 RGNDFTDRHWREVFNLLEMEYKKS-DTLKVKDFLXXXXXXXXXXXXLQKICTTATSESAI 1153
RG+ + HW E+F L + + + LK D L L+++ + A E AI
Sbjct: 1162 RGDVLSADHWHEMFRFLGLPRGTTIEKLKFADLLSVSKNIIENTDQLKQLNSRAQGEVAI 1221
Query: 1154 RSALNELEIWYAGARLSIIYYSDKTKRPTPIIKDFKEIMNKVEEQQWIVCSVSG----GG 1209
R A+ EL +W A ++ Y + IIK++KE +N +++ Q ++ S+
Sbjct: 1222 RDAIQELTLWAAQTEFTLADYKHSNGQNLKIIKEWKESINSLKDSQALLQSLKSSPYYSQ 1281
Query: 1210 SPEACGPWEARLRAAHDVLRATHHAQRR 1237
+ WE RL L + QR+
Sbjct: 1282 FTDKTAVWETRLADLDVFLAQMNEIQRK 1309
Score = 47.2 bits (107), Expect = 7e-05
Identities = 36/168 (21%), Positives = 66/168 (39%), Gaps = 16/168 (9%)
Query: 94 TIEDEFEYWKAVMEKKDASKKEREMSSTFSEQFQYIIEELRSMQSNVMIDAREAAENIGG 153
++ DE WK K + + F +Q Q ++E +M+ + + E E
Sbjct: 148 SLHDEIRSWKG-----QTGKPANDYNEAF-KQLQLLVE---TMEERSIDELSELVECFED 198
Query: 154 ILDDIWRTTTAPYPSDRMVHVMDVIGHTICTIIQTNLVALDLWRVHDDIREIEMLVSISD 213
D++W T PYP +RM +++ +C I + +WR ++ + + D
Sbjct: 199 TCDELWNCGT-PYPQNRMKMLIEYGASYLCETITFKIDDSAIWRNDKVADQLRSAIDVCD 257
Query: 214 CLQVVETWTSACRALTETYWPNYALHPWNAKTYIPQFCVNFQMRLKEV 261
+ ++ R LT W H W +F F+ RL E+
Sbjct: 258 QMLII------VRLLTAQTWKRNVEHTWEGDAMEMKFLNGFKDRLDEI 299
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 51.6 bits (118), Expect = 3e-06
Identities = 60/300 (20%), Positives = 114/300 (38%), Gaps = 26/300 (8%)
Query: 911 EWQKTRELMLNHQQMFENQAEIVKASLNGEWENLNTSVEAFVSRWTQSKARLDAAHDVHY 970
EW E++ + Q ++ E E + ++ W +SK
Sbjct: 1184 EWSAFTEILSLRDASIQTQMMNLQTKFAQEDELVEKRTVETLTEWNKSKP----VEGAQR 1239
Query: 971 EEMADRCRTVFEAIASWKKFITDREELVKECEKFNMKTDIADVWQQGDKLFENYETL--- 1027
+ A T FEA K +R ++ K ++ +D A +GDKL E L
Sbjct: 1240 PQEALNVITAFEA--KLNKLTEERNKMRKARVALDL-SDSAHAPSEGDKLTVATEELAAM 1296
Query: 1028 ---WTVFEKFNEEYESIAEQSWIVFQ--KKLHLLDEFTTKWS---TRLEPYTVVTLFIQQ 1079
W + + E++W+ Q K LDE + + Y ++Q
Sbjct: 1297 KDVWKALQPVYTGIDEAKEKTWLSVQPRKIRQSLDELMNQLKQLPVKCRTYKSYE-HVKQ 1355
Query: 1080 ELDRYSDITPLLKYLRGNDFTDRHWREVFNLLEMEYKKSDTLKVKDFLXXXXXXXXXXXX 1139
L Y + L+ L+ +RHW ++ + + + SD + +
Sbjct: 1356 MLHTYGKMNMLVAELKSEALKERHWHQMMKEMRVNWNLSDLTLGQVW---DADILRHEHT 1412
Query: 1140 LQKICTTATSESAIRSALNELEIWYAGARLSIIYYSDKTKRPTPIIKDFKEIMNKVEEQQ 1199
++KI A E A+ L E+ ++ + ++ Y +KT+ +IK + ++ NK++E Q
Sbjct: 1413 IKKILLVAQGEMALEEFLREMREYWQNYEVELVNYQNKTR----LIKGWDDLFNKLKEHQ 1468
Score = 44.8 bits (101), Expect = 4e-04
Identities = 28/120 (23%), Positives = 58/120 (48%), Gaps = 11/120 (9%)
Query: 272 NPAWQAAVSLFSTSLRQVEVKVAEKLKPRLHNT-STKQMLYEFLRYEALIERPYVKQTLN 330
+PAW+ A + + VE + +LK +L ++ ++ +M F RY AL RP ++ +
Sbjct: 525 SPAWENAFKRYEDQIGVVETAITTRLKSQLESSRNSNEMFSIFSRYNALFIRPRIRGAIY 584
Query: 331 NELEIFATSLVAMLKDIKNQIDS------DETDVKMYQPPEMSPLVHRVQWAKQMEAKVK 384
+ T L+ +K+ N++ + E VK+ Q + P ++ W + E +++
Sbjct: 585 E----YQTRLINRVKEDINELQARFTKARGEQGVKIMQTVGLPPFSAKIMWIRNYERQLQ 640
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 51.6 bits (118), Expect = 3e-06
Identities = 60/300 (20%), Positives = 114/300 (38%), Gaps = 26/300 (8%)
Query: 911 EWQKTRELMLNHQQMFENQAEIVKASLNGEWENLNTSVEAFVSRWTQSKARLDAAHDVHY 970
EW E++ + Q ++ E E + ++ W +SK
Sbjct: 1184 EWSAFTEILSLRDASIQTQMMNLQTKFAQEDELVEKRTVETLTEWNKSKP----VEGAQR 1239
Query: 971 EEMADRCRTVFEAIASWKKFITDREELVKECEKFNMKTDIADVWQQGDKLFENYETL--- 1027
+ A T FEA K +R ++ K ++ +D A +GDKL E L
Sbjct: 1240 PQEALNVITAFEA--KLNKLTEERNKMRKARVALDL-SDSAHAPSEGDKLTVATEELAAM 1296
Query: 1028 ---WTVFEKFNEEYESIAEQSWIVFQ--KKLHLLDEFTTKWS---TRLEPYTVVTLFIQQ 1079
W + + E++W+ Q K LDE + + Y ++Q
Sbjct: 1297 KDVWKALQPVYTGIDEAKEKTWLSVQPRKIRQSLDELMNQLKQLPVKCRTYKSYE-HVKQ 1355
Query: 1080 ELDRYSDITPLLKYLRGNDFTDRHWREVFNLLEMEYKKSDTLKVKDFLXXXXXXXXXXXX 1139
L Y + L+ L+ +RHW ++ + + + SD + +
Sbjct: 1356 MLHTYGKMNMLVAELKSEALKERHWHQMMKEMRVNWNLSDLTLGQVW---DADILRHEHT 1412
Query: 1140 LQKICTTATSESAIRSALNELEIWYAGARLSIIYYSDKTKRPTPIIKDFKEIMNKVEEQQ 1199
++KI A E A+ L E+ ++ + ++ Y +KT+ +IK + ++ NK++E Q
Sbjct: 1413 IKKILLVAQGEMALEEFLREMREYWQNYEVELVNYQNKTR----LIKGWDDLFNKLKEHQ 1468
Score = 44.8 bits (101), Expect = 4e-04
Identities = 28/120 (23%), Positives = 58/120 (48%), Gaps = 11/120 (9%)
Query: 272 NPAWQAAVSLFSTSLRQVEVKVAEKLKPRLHNT-STKQMLYEFLRYEALIERPYVKQTLN 330
+PAW+ A + + VE + +LK +L ++ ++ +M F RY AL RP ++ +
Sbjct: 525 SPAWENAFKRYEDQIGVVETAITTRLKSQLESSRNSNEMFSIFSRYNALFIRPRIRGAIY 584
Query: 331 NELEIFATSLVAMLKDIKNQIDS------DETDVKMYQPPEMSPLVHRVQWAKQMEAKVK 384
+ T L+ +K+ N++ + E VK+ Q + P ++ W + E +++
Sbjct: 585 E----YQTRLINRVKEDINELQARFTKARGEQGVKIMQTVGLPPFSAKIMWIRNYERQLQ 640
>AF016684-15|AAB66214.1| 543|Caenorhabditis elegans Hypothetical
protein F45C12.15 protein.
Length = 543
Score = 39.1 bits (87), Expect = 0.019
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 12/165 (7%)
Query: 844 SKDLTELSAKQHALQEKMP----ERGGKDSSKNPCNQRISCQMEKIVAALKKKGN-MLRT 898
S+ L ++SA+ Q+++ R G P N +S K+ KK G ++
Sbjct: 110 SESLQKISAQLGLTQQQVTGWFNRRNGTYLISGPHNS-VSKADRKLSHMTKKLGERIMEK 168
Query: 899 WGGDTSIDGTIKE-W-QKTRELMLN-HQQMFENQAEIVKASLNGEWENLNTSVEAFVSRW 955
+ D +KE W Q+ R + H +++ +AE++K+ LNGE +L ++A +
Sbjct: 169 FESDDLPSVELKEQWAQELRTTVQKVHVLLYKTRAEVMKSYLNGERADLPRKMKAILE-- 226
Query: 956 TQSKARLDAAHDVHYEEMADRCRTVFEAIASWKKFITDREELVKE 1000
+ D DVH E D+C + I + + E+ +E
Sbjct: 227 -AEYDKSDGVDDVHIRECKDQCELSYSLIEEYFQMRRKAEQKAQE 270
>Z81096-8|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical
protein B0365.7 protein.
Length = 2769
Score = 34.7 bits (76), Expect = 0.42
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 7/159 (4%)
Query: 636 YIKTLLSLDKHFAHIKVDLVLRGHKIRVQPPIEEIRVQHYHQLRRLVSLPAQFVGVQNNI 695
++ TLL+L+ F H+ R KI E+I Q H+ R + +++ + N I
Sbjct: 814 WLDTLLNLNT-FVHLYKQCDTRWRKIEGVFSTEDIAYQMPHEFRTFKKISLRWLHINNQI 872
Query: 696 TERQSIFADIVDKHSWLGNKAVKKLEQVLSSLEQCGRQWTRRAALACVPDLRALCTHSLA 755
TE + I + +D L N + +LE + +E + R+ A P L AL +
Sbjct: 873 TEERPIL-EQMDLVQQL-NLELSELEVLFGRMENGFHAYLRKKR-AVFPRLFALSDELVL 929
Query: 756 EPEHWELNFKACKAYGQAV--AKMTFD-DEKIEWLSVGT 791
CK+Y + + TFD + K+E +SV T
Sbjct: 930 SLICDSREPANCKSYIPLLFPSLTTFDQNTKMEIISVST 968
>Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical
protein B0365.7 protein.
Length = 2769
Score = 34.7 bits (76), Expect = 0.42
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 7/159 (4%)
Query: 636 YIKTLLSLDKHFAHIKVDLVLRGHKIRVQPPIEEIRVQHYHQLRRLVSLPAQFVGVQNNI 695
++ TLL+L+ F H+ R KI E+I Q H+ R + +++ + N I
Sbjct: 814 WLDTLLNLNT-FVHLYKQCDTRWRKIEGVFSTEDIAYQMPHEFRTFKKISLRWLHINNQI 872
Query: 696 TERQSIFADIVDKHSWLGNKAVKKLEQVLSSLEQCGRQWTRRAALACVPDLRALCTHSLA 755
TE + I + +D L N + +LE + +E + R+ A P L AL +
Sbjct: 873 TEERPIL-EQMDLVQQL-NLELSELEVLFGRMENGFHAYLRKKR-AVFPRLFALSDELVL 929
Query: 756 EPEHWELNFKACKAYGQAV--AKMTFD-DEKIEWLSVGT 791
CK+Y + + TFD + K+E +SV T
Sbjct: 930 SLICDSREPANCKSYIPLLFPSLTTFDQNTKMEIISVST 968
>AL032626-20|CAD45605.1| 445|Caenorhabditis elegans Hypothetical
protein Y37D8A.23b protein.
Length = 445
Score = 33.5 bits (73), Expect = 0.96
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 317 EALIERPYVKQTLNNE-LEIFATSLV-AMLKDIKNQIDSDETDVKMYQPPEMSPLVHRVQ 374
E LI + + QT N E E F +V +LK IK+Q D D+ ++ + P +M L+ +
Sbjct: 14 ENLIAKEILPQTGNWEGTEEFLNRIVQVLLKYIKDQNDRDQKILEFHHPDKMQMLMD-LS 72
Query: 375 WAKQMEAKVKEIKICAD-KHLSEFSGCPELTN 405
++ E+ +K +K C D L +G P N
Sbjct: 73 IPEKPESLLKLVKSCEDVLRLGVRTGHPRFFN 104
>AL032626-19|CAA21537.1| 508|Caenorhabditis elegans Hypothetical
protein Y37D8A.23a protein.
Length = 508
Score = 33.5 bits (73), Expect = 0.96
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 317 EALIERPYVKQTLNNE-LEIFATSLV-AMLKDIKNQIDSDETDVKMYQPPEMSPLVHRVQ 374
E LI + + QT N E E F +V +LK IK+Q D D+ ++ + P +M L+ +
Sbjct: 14 ENLIAKEILPQTGNWEGTEEFLNRIVQVLLKYIKDQNDRDQKILEFHHPDKMQMLMD-LS 72
Query: 375 WAKQMEAKVKEIKICAD-KHLSEFSGCPELTN 405
++ E+ +K +K C D L +G P N
Sbjct: 73 IPEKPESLLKLVKSCEDVLRLGVRTGHPRFFN 104
>AF109378-1|AAD19958.1| 508|Caenorhabditis elegans glutamic acid
decarboxylase protein.
Length = 508
Score = 33.5 bits (73), Expect = 0.96
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 317 EALIERPYVKQTLNNE-LEIFATSLV-AMLKDIKNQIDSDETDVKMYQPPEMSPLVHRVQ 374
E LI + + QT N E E F +V +LK IK+Q D D+ ++ + P +M L+ +
Sbjct: 14 ENLIAKEILPQTGNWEGTEEFLNRIVQVLLKYIKDQNDRDQKILEFHHPDKMQMLMD-LS 72
Query: 375 WAKQMEAKVKEIKICAD-KHLSEFSGCPELTN 405
++ E+ +K +K C D L +G P N
Sbjct: 73 IPEKPESLLKLVKSCEDVLRLGVRTGHPRFFN 104
>U20862-1|AAK29863.2| 253|Caenorhabditis elegans Hypothetical
protein W06E11.4 protein.
Length = 253
Score = 33.1 bits (72), Expect = 1.3
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 70 LLELESVLRVVNYGK--EKGNVNAIFTIEDEFEYWKAVMEKKDASKKEREMSSTFSEQFQ 127
+L+ +V V+ G+ +K + A F IED+ E K +++K D E+E + + +
Sbjct: 52 VLQTHTVFSNVSKGQLSKKEELIAAFGIEDQLEICKIILDKGDLQVSEKERQAASDQSLK 111
Query: 128 YIIEELRSMQSN 139
+ + + SM N
Sbjct: 112 EVSQLIASMVVN 123
>Z66565-5|CAA91482.2| 766|Caenorhabditis elegans Hypothetical protein
T04F8.6 protein.
Length = 766
Score = 31.9 bits (69), Expect = 2.9
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 957 QSKARLDAAHDVHYEEMADRCRTVFEAIASWKKFITDREELVKECEKFNMKTDIADVWQQ 1016
Q++ ++A+++ +EM +RCR A+ +KF +R E+ KE E N++ D++ V Q
Sbjct: 298 QNQQSIEASYNNRLKEMEERCRGRIAAME--EKFRMERHEMQKEIE--NIEKDLSLVRQN 353
Query: 1017 GDKL 1020
L
Sbjct: 354 ETSL 357
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 31.9 bits (69), Expect = 2.9
Identities = 37/184 (20%), Positives = 82/184 (44%), Gaps = 21/184 (11%)
Query: 870 SKNPCNQRISCQMEKIVAALKKKGNMLRTWGGDTSIDGTIKEWQKTRELMLNHQQMFENQ 929
SKN N ++ Q+E + + ++ K +R ++ T++E +E+ + + + +Q
Sbjct: 597 SKNELNT-LTDQIESLNSEVENKNEEIR------NLMATLQE----KEVHIQNVRTSSHQ 645
Query: 930 AEIVKASLNGEWENLNTSVEAFVSRWTQSKARLDAAHDVHYEEMADRCRTVFEAIASWKK 989
NGE + L + + + ++ A++ Y++ A + + E +A+W++
Sbjct: 646 LTATYEEANGEIDILKAELTRLHEQVNERTRQISEANE-KYDDAARKNDALLEDVATWQE 704
Query: 990 ----FITDREEL-----VKECEKFNMKTDIADVWQQGDKLFENYETLWTVFEKFNEEYES 1040
+ EE+ KE E+ +++ + D+ DKL + + NEE S
Sbjct: 705 KYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDKLTNELKQKGVTVDSLNEEISS 764
Query: 1041 IAEQ 1044
+ EQ
Sbjct: 765 LKEQ 768
Score = 30.3 bits (65), Expect = 8.9
Identities = 34/152 (22%), Positives = 65/152 (42%), Gaps = 7/152 (4%)
Query: 917 ELMLNHQQMFENQAEIVKASLNGEWENLNTSVEAFVSRWTQSKARLDAAHDVHYEEMADR 976
+L ++H E + E +K + E E LN + + W+ + RL+++ + E+ +R
Sbjct: 839 QLKVDHLHT-EEEVERLKEKMRKELEKLNEQNDGDRAEWSNERNRLESSKNEAVTELQER 897
Query: 977 CRTVFEAIASWK-KFITDREELVKECEKFNMKTDIADVWQQGDKLFENYETLWTVFEKFN 1035
+ + + + + K I R +L EK D + D+ E E + N
Sbjct: 898 VQKLEDVVKEKEDKEIALRRDLEDSHEKSRDLDDKLRKMELTDE--EKEEDRKKEQKTLN 955
Query: 1036 EEYESIAEQ---SWIVFQKKLHLLDEFTTKWS 1064
EE + EQ + +V K +D+ T + S
Sbjct: 956 EERMKLMEQKEEAMLVATKHATTIDQQTRRIS 987
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 31.9 bits (69), Expect = 2.9
Identities = 37/184 (20%), Positives = 82/184 (44%), Gaps = 21/184 (11%)
Query: 870 SKNPCNQRISCQMEKIVAALKKKGNMLRTWGGDTSIDGTIKEWQKTRELMLNHQQMFENQ 929
SKN N ++ Q+E + + ++ K +R ++ T++E +E+ + + + +Q
Sbjct: 597 SKNELNT-LTDQIESLNSEVENKNEEIR------NLMATLQE----KEVHIQNVRTSSHQ 645
Query: 930 AEIVKASLNGEWENLNTSVEAFVSRWTQSKARLDAAHDVHYEEMADRCRTVFEAIASWKK 989
NGE + L + + + ++ A++ Y++ A + + E +A+W++
Sbjct: 646 LTATYEEANGEIDILKAELTRLHEQVNERTRQISEANE-KYDDAARKNDALLEDVATWQE 704
Query: 990 ----FITDREEL-----VKECEKFNMKTDIADVWQQGDKLFENYETLWTVFEKFNEEYES 1040
+ EE+ KE E+ +++ + D+ DKL + + NEE S
Sbjct: 705 KYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDKLTNELKQKGVTVDSLNEEISS 764
Query: 1041 IAEQ 1044
+ EQ
Sbjct: 765 LKEQ 768
Score = 30.3 bits (65), Expect = 8.9
Identities = 34/152 (22%), Positives = 65/152 (42%), Gaps = 7/152 (4%)
Query: 917 ELMLNHQQMFENQAEIVKASLNGEWENLNTSVEAFVSRWTQSKARLDAAHDVHYEEMADR 976
+L ++H E + E +K + E E LN + + W+ + RL+++ + E+ +R
Sbjct: 839 QLKVDHLHT-EEEVERLKEKMRKELEKLNEQNDGDRAEWSNERNRLESSKNEAVTELQER 897
Query: 977 CRTVFEAIASWK-KFITDREELVKECEKFNMKTDIADVWQQGDKLFENYETLWTVFEKFN 1035
+ + + + + K I R +L EK D + D+ E E + N
Sbjct: 898 VQKLEDVVKEKEDKEIALRRDLEDSHEKSRDLDDKLRKMELTDE--EKEEDRKKEQKTLN 955
Query: 1036 EEYESIAEQ---SWIVFQKKLHLLDEFTTKWS 1064
EE + EQ + +V K +D+ T + S
Sbjct: 956 EERMKLMEQKEEAMLVATKHATTIDQQTRRIS 987
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 31.9 bits (69), Expect = 2.9
Identities = 37/184 (20%), Positives = 82/184 (44%), Gaps = 21/184 (11%)
Query: 870 SKNPCNQRISCQMEKIVAALKKKGNMLRTWGGDTSIDGTIKEWQKTRELMLNHQQMFENQ 929
SKN N ++ Q+E + + ++ K +R ++ T++E +E+ + + + +Q
Sbjct: 357 SKNELNT-LTDQIESLNSEVENKNEEIR------NLMATLQE----KEVHIQNVRTSSHQ 405
Query: 930 AEIVKASLNGEWENLNTSVEAFVSRWTQSKARLDAAHDVHYEEMADRCRTVFEAIASWKK 989
NGE + L + + + ++ A++ Y++ A + + E +A+W++
Sbjct: 406 LTATYEEANGEIDILKAELTRLHEQVNERTRQISEANE-KYDDAARKNDALLEDVATWQE 464
Query: 990 ----FITDREEL-----VKECEKFNMKTDIADVWQQGDKLFENYETLWTVFEKFNEEYES 1040
+ EE+ KE E+ +++ + D+ DKL + + NEE S
Sbjct: 465 KYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDKLTNELKQKGVTVDSLNEEISS 524
Query: 1041 IAEQ 1044
+ EQ
Sbjct: 525 LKEQ 528
Score = 30.3 bits (65), Expect = 8.9
Identities = 34/152 (22%), Positives = 65/152 (42%), Gaps = 7/152 (4%)
Query: 917 ELMLNHQQMFENQAEIVKASLNGEWENLNTSVEAFVSRWTQSKARLDAAHDVHYEEMADR 976
+L ++H E + E +K + E E LN + + W+ + RL+++ + E+ +R
Sbjct: 599 QLKVDHLHT-EEEVERLKEKMRKELEKLNEQNDGDRAEWSNERNRLESSKNEAVTELQER 657
Query: 977 CRTVFEAIASWK-KFITDREELVKECEKFNMKTDIADVWQQGDKLFENYETLWTVFEKFN 1035
+ + + + + K I R +L EK D + D+ E E + N
Sbjct: 658 VQKLEDVVKEKEDKEIALRRDLEDSHEKSRDLDDKLRKMELTDE--EKEEDRKKEQKTLN 715
Query: 1036 EEYESIAEQ---SWIVFQKKLHLLDEFTTKWS 1064
EE + EQ + +V K +D+ T + S
Sbjct: 716 EERMKLMEQKEEAMLVATKHATTIDQQTRRIS 747
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 31.9 bits (69), Expect = 2.9
Identities = 37/184 (20%), Positives = 82/184 (44%), Gaps = 21/184 (11%)
Query: 870 SKNPCNQRISCQMEKIVAALKKKGNMLRTWGGDTSIDGTIKEWQKTRELMLNHQQMFENQ 929
SKN N ++ Q+E + + ++ K +R ++ T++E +E+ + + + +Q
Sbjct: 597 SKNELNT-LTDQIESLNSEVENKNEEIR------NLMATLQE----KEVHIQNVRTSSHQ 645
Query: 930 AEIVKASLNGEWENLNTSVEAFVSRWTQSKARLDAAHDVHYEEMADRCRTVFEAIASWKK 989
NGE + L + + + ++ A++ Y++ A + + E +A+W++
Sbjct: 646 LTATYEEANGEIDILKAELTRLHEQVNERTRQISEANE-KYDDAARKNDALLEDVATWQE 704
Query: 990 ----FITDREEL-----VKECEKFNMKTDIADVWQQGDKLFENYETLWTVFEKFNEEYES 1040
+ EE+ KE E+ +++ + D+ DKL + + NEE S
Sbjct: 705 KYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDKLTNELKQKGVTVDSLNEEISS 764
Query: 1041 IAEQ 1044
+ EQ
Sbjct: 765 LKEQ 768
Score = 30.3 bits (65), Expect = 8.9
Identities = 34/152 (22%), Positives = 65/152 (42%), Gaps = 7/152 (4%)
Query: 917 ELMLNHQQMFENQAEIVKASLNGEWENLNTSVEAFVSRWTQSKARLDAAHDVHYEEMADR 976
+L ++H E + E +K + E E LN + + W+ + RL+++ + E+ +R
Sbjct: 839 QLKVDHLHT-EEEVERLKEKMRKELEKLNEQNDGDRAEWSNERNRLESSKNEAVTELQER 897
Query: 977 CRTVFEAIASWK-KFITDREELVKECEKFNMKTDIADVWQQGDKLFENYETLWTVFEKFN 1035
+ + + + + K I R +L EK D + D+ E E + N
Sbjct: 898 VQKLEDVVKEKEDKEIALRRDLEDSHEKSRDLDDKLRKMELTDE--EKEEDRKKEQKTLN 955
Query: 1036 EEYESIAEQ---SWIVFQKKLHLLDEFTTKWS 1064
EE + EQ + +V K +D+ T + S
Sbjct: 956 EERMKLMEQKEEAMLVATKHATTIDQQTRRIS 987
>U41038-5|AAK29710.4| 519|Caenorhabditis elegans Hypothetical protein
F59C12.3 protein.
Length = 519
Score = 31.1 bits (67), Expect = 5.1
Identities = 28/124 (22%), Positives = 54/124 (43%), Gaps = 11/124 (8%)
Query: 930 AEIVKASLNGEWENLNTS---VEAFVSRWTQSKA--RLDAAHDVHYEEMADRCRTV--FE 982
A+ ++ LN WE + VE+ ++W K R+ D R T E
Sbjct: 291 ADELRKQLNEVWEEQHRRDQMVESERAQWEMEKTQLRMQLNKDTSLTGSLKRTTTPGSTE 350
Query: 983 AIASWKKFITDREELVKECEKFNMKTDIADVWQQGDKLFENYETLWTVFEKFNEEYESIA 1042
+ +K I +++ +++ E+ M D+ GDK + TL T+ + F + + +
Sbjct: 351 DLIRMRKSIQSKDDKIQQLER--MVNDLRKT--HGDKTEQRKSTLATITDNFETQVDKLK 406
Query: 1043 EQSW 1046
E+S+
Sbjct: 407 EESY 410
>AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric
chromosome bindingprotein protein 1 protein.
Length = 1475
Score = 31.1 bits (67), Expect = 5.1
Identities = 24/113 (21%), Positives = 54/113 (47%), Gaps = 5/113 (4%)
Query: 286 LRQVEVKVAEKLKPRLHNTSTKQMLYEFLRYEALIERPYVKQTLNNELEIFATSLVAMLK 345
L V+ K +E +K + + E LR+EA V+ L +LE F + ++ +
Sbjct: 462 LMVVQEKASENIKNAEEKVNGLEAEVEKLRFEATNNSRVVE--LEQQLEEFRSLMIKEIS 519
Query: 346 DIKNQIDSDETDVKMYQPPEMSPLVHRV---QWAKQMEAKVKEIKICADKHLS 395
D++NQ+++ + + P + + +M+ +++E+K +D++ S
Sbjct: 520 DLENQLEAAKLESGSTSEPNAQLEASQATIQELTSEMKMQLEEVKRQSDENNS 572
Score = 30.3 bits (65), Expect = 8.9
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Query: 909 IKEWQKTRELMLNHQQMFENQAEIVKASLNGEWENLNTSVEAFVSRWTQSKARLDAAHDV 968
++E +K +E MLN Q FE + ++ N N N +EA +Q K +
Sbjct: 1192 VEELEKVQEQMLNLVQAFEVEKASIRLEWNSSLSNANEKLEAAEEALSQ-KENTIVTLES 1250
Query: 969 HYEEMADRCRTVFEAIASWK 988
E ++ + E WK
Sbjct: 1251 RIETISQQFEARLEEANVWK 1270
>AF038613-11|AAB92054.2| 836|Caenorhabditis elegans Mammalian
elks/cast/erc/rab6 interactingprotein homolog protein 1
protein.
Length = 836
Score = 31.1 bits (67), Expect = 5.1
Identities = 17/34 (50%), Positives = 20/34 (58%)
Query: 544 DVEQLANYTEKLKKMVLKLEGQNTYLTSQHMAIK 577
DVE N EKL KMV LE +N LT+Q +K
Sbjct: 586 DVEGARNEVEKLLKMVHSLEKENLTLTAQCKQLK 619
>Z81015-5|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical
protein C11E4.6 protein.
Length = 1170
Score = 30.7 bits (66), Expect = 6.8
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 112 SKKEREMSSTFSEQFQYIIEELRSMQSNVMIDAREAAENIGGILDDIWRTTTAPYPS-DR 170
S + +M+S+F+E + + ++ +N+M+++ +N+ D TT+ PS DR
Sbjct: 715 STSKVQMNSSFTEPEEPVRIRRQNGTTNLMLNSLSPTDNLSSPSSDQKSDTTSEEPSWDR 774
Query: 171 MVHVMDVIGHTIC 183
+ V D G C
Sbjct: 775 VESVFDSFGAAPC 787
>U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env
protein precursor protein.
Length = 2272
Score = 30.7 bits (66), Expect = 6.8
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 1084 YSDITPLLKYLRGNDFTDRHWREVFNLLEMEYK 1116
++D PL+ L+G+ DR WR +LE + K
Sbjct: 1400 FTDHKPLISLLKGSPLADRLWRWSIEILEFDVK 1432
>L23646-13|AAA28035.2| 2175|Caenorhabditis elegans Hypothetical
protein F44E2.2a protein.
Length = 2175
Score = 30.7 bits (66), Expect = 6.8
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 1084 YSDITPLLKYLRGNDFTDRHWREVFNLLEMEYK 1116
++D PL+ L+G+ DR WR +LE + K
Sbjct: 1303 FTDHKPLISLLKGSPLADRLWRWSIEILEFDVK 1335
>L23646-12|AAL02516.1| 2186|Caenorhabditis elegans Hypothetical
protein F44E2.2b protein.
Length = 2186
Score = 30.7 bits (66), Expect = 6.8
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 1084 YSDITPLLKYLRGNDFTDRHWREVFNLLEMEYK 1116
++D PL+ L+G+ DR WR +LE + K
Sbjct: 1314 FTDHKPLISLLKGSPLADRLWRWSIEILEFDVK 1346
>AF016683-10|AAB66198.1| 405|Caenorhabditis elegans Hypothetical
protein K09F6.8 protein.
Length = 405
Score = 30.7 bits (66), Expect = 6.8
Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 23 LDEESENALSEFIYNSQTLLIQGYVHNDTLRLSMKGNDLYSSKLQKCLLELESVLRVVNY 82
+++++ L + S+ LLI Y H + +RL+ K N K +C+ E+ +L +N
Sbjct: 264 IEDDTHEILESSFFESERLLIIRYAHLNLIRLAGKRN--VCIKYVRCVTEV-GLLDFLNR 320
Query: 83 GKE-KGNVNAI--FTIEDEFE--YWKAVMEKKDASKKEREMSSTF 122
E + V F ++DE + + V++K D +++ +E S F
Sbjct: 321 WLEGRRGVGTCWWFALDDESQARIFLEVIKKDDRAEEVQESSVLF 365
>Z81531-10|CAE17807.1| 367|Caenorhabditis elegans Hypothetical
protein F36D3.13 protein.
Length = 367
Score = 30.3 bits (65), Expect = 8.9
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 153 GILDDIWRTTTAPYPSDRMVHVMDVIGHTICTIIQTNLVALDLW 196
G++ ++RT YP +H M + + + II L+ + LW
Sbjct: 129 GVVMAVFRTLLIKYPLSHRLHRMSTLKYKLLPIISILLIIISLW 172
>AC024753-2|AAF60457.2| 561|Caenorhabditis elegans Hypothetical
protein Y23H5B.5 protein.
Length = 561
Score = 30.3 bits (65), Expect = 8.9
Identities = 16/70 (22%), Positives = 33/70 (47%)
Query: 533 IVQDQKTVYWDDVEQLANYTEKLKKMVLKLEGQNTYLTSQHMAIKDIVMKLINTELLAKL 592
I+ D+ +YW ++QL + E +++ + Y + +++ + + E L
Sbjct: 19 ILLDEDVIYWKRMQQLTVFQEPAVVSSVRISPKKPYHVATTSSVRLTLYDTVVCEPLNLF 78
Query: 593 SEWKKGVKDI 602
S +KKGV I
Sbjct: 79 SRFKKGVCSI 88
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.131 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,227,316
Number of Sequences: 27539
Number of extensions: 1214441
Number of successful extensions: 4004
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 3951
Number of HSP's gapped (non-prelim): 64
length of query: 1237
length of database: 12,573,161
effective HSP length: 90
effective length of query: 1147
effective length of database: 10,094,651
effective search space: 11578564697
effective search space used: 11578564697
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 65 (30.3 bits)
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