Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000907-TA|BGIBMGA000907-PA|IPR013026|Tetratricopeptide
region, IPR013105|Tetratricopeptide TPR_2
(349 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0374 + 22649455-22650024,22650085-22650637,22650812-226511... 34 0.15
04_04_0639 + 26883810-26883821,26884131-26884307,26885276-268853... 34 0.19
03_06_0766 - 36106116-36106230,36106598-36106716,36106880-361069... 33 0.34
09_06_0376 - 22694914-22696071,22696111-22696416 33 0.45
04_03_0874 + 20467608-20468306,20468575-20468736,20470083-204701... 32 0.79
06_03_1357 + 29543922-29545058,29545632-29545784,29545904-29546050 31 1.0
04_03_0532 - 16824394-16824447,16824545-16824665,16824748-168248... 31 1.0
11_01_0149 + 1247985-1248207,1248982-1249508 31 1.4
10_06_0106 + 10827301-10827523,10828298-10828824 31 1.4
08_01_0727 + 6567935-6568112,6568197-6568912,6569061-6569162,656... 31 1.4
04_03_0590 + 17621148-17621370,17622145-17622671 31 1.4
03_03_0244 - 15772156-15773964,15774190-15774711 31 1.4
03_02_0143 - 5888005-5888088,5888818-5888949,5889485-5889634,589... 31 1.4
01_06_1547 - 38150814-38151488,38151608-38151666,38151774-381519... 31 1.8
04_04_1350 + 32822711-32823063,32823681-32823803,32823890-328239... 30 2.4
06_03_0975 - 26471438-26472109,26472189-26472284,26472372-264724... 29 4.2
06_03_0791 - 24641350-24641418,24641684-24641965,24642318-246425... 29 4.2
10_07_0081 - 12716130-12716271,12716367-12716449,12716729-127167... 29 5.5
08_01_0107 - 789217-789984,790070-790219,790303-790890,790968-79... 29 5.5
02_04_0082 - 19559626-19560152,19560927-19561149 29 5.5
12_01_0639 + 5383967-5385951,5386973-5387066,5387410-5387841,538... 29 7.3
05_05_0251 + 23616546-23617760 29 7.3
02_03_0272 - 17146578-17146691,17146806-17146926,17147260-171473... 29 7.3
11_04_0013 - 12208818-12209344,12209976-12210198 28 9.7
11_01_0420 - 3230936-3231710,3232265-3233885,3234411-3234834 28 9.7
06_03_1131 + 27872870-27872958,27873036-27873281,27874058-278741... 28 9.7
05_07_0021 - 27100249-27101838,27102434-27102547 28 9.7
05_05_0147 + 22715144-22715444,22716245-22716407,22716484-227165... 28 9.7
02_05_1283 - 35444811-35445146,35445428-35445613,35445700-35445834 28 9.7
02_04_0157 + 20388761-20388763,20389807-20389935,20390206-203903... 28 9.7
>09_06_0374 +
22649455-22650024,22650085-22650637,22650812-22651147,
22651171-22652605,22652939-22653062
Length = 1005
Score = 34.3 bits (75), Expect = 0.15
Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 4/116 (3%)
Query: 99 RAAGYTSASRDRPMPTQHLEDSVEDRVKQMEARIMALVEESCLLSARPDPDDDSTTRKEH 158
RA G A+ R E + R + +EAR MAL E +C++ + + T +E
Sbjct: 670 RAQGVLDAAAAREQRAAETEAASRRREEALEARAMALEERACVVERDLADREAAVTIRE- 728
Query: 159 DLGQALAKAQEASTMERQLIRMQEQANLGDTHNLDLTFAVLCNLADQYALNEMYTE 214
LA + A E +R++E A L+ AV LA +L E E
Sbjct: 729 ---ATLAAHEAACAEEEFTLRLREDALTERERALEGAEAVAQQLAVNLSLREAAQE 781
>04_04_0639 +
26883810-26883821,26884131-26884307,26885276-26885339,
26886614-26887734,26888193-26888481,26888528-26888658,
26888910-26889133,26889220-26889286,26889744-26889803,
26889896-26889979,26890290-26890301
Length = 746
Score = 33.9 bits (74), Expect = 0.19
Identities = 42/172 (24%), Positives = 69/172 (40%), Gaps = 15/172 (8%)
Query: 157 EHDLGQALAKAQEASTMERQLIRMQ--------EQANLGDTHNLDLTFAVLCNLADQYAL 208
EH L K +A +++L + + E+ G + L C +++
Sbjct: 517 EHRNPDTLKKLNDAEIAKKELEQQEYYDPKIADEEREKGGDEDETLILVHSC-AGNEFFK 575
Query: 209 NEMYTEALNTY-QLLTRNKLFPHANRLKVNMGNIYFKMGEHPKALKLYRMALDQTPTAEK 267
+ Y EA+ Y + L RN P R+ N Y K+G P+ LK ++ PT K
Sbjct: 576 QQKYPEAVKHYSEALRRN---PKDPRVYSNRAACYTKLGAMPEGLKDAEKCIELDPTFSK 632
Query: 268 DLSDAEGGKAAFHAMLDVEPPTYHQDIPID-DEKDTYECVVRDVSRGDKLSR 318
+ +G F D TY + D + ++ + V R V R +K SR
Sbjct: 633 GYT-RKGAIQFFMKEYDKALETYQAGLKHDPNNQELLDGVRRCVQRINKASR 683
>03_06_0766 -
36106116-36106230,36106598-36106716,36106880-36106960,
36107062-36107118,36107350-36107373,36107810-36107909,
36107983-36108053,36108132-36108236,36108674-36108847,
36109406-36109555,36109701-36109871,36109968-36110024,
36110107-36110142,36110165-36110357,36110439-36110578,
36110960-36111166,36111442-36111498,36111711-36111809,
36112289-36112408,36112865-36113032,36113450-36113510,
36113611-36113720,36114132-36114263,36114344-36114511,
36115118-36115182,36115242-36115372,36115450-36115487,
36116272-36116373,36116480-36116537,36117479-36117580,
36117695-36117909,36118158-36118307,36118699-36118858,
36118984-36119042,36119287-36119443,36119536-36119681,
36121376-36121648,36122889-36122891
Length = 1457
Score = 33.1 bits (72), Expect = 0.34
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 198 VLCNLADQYALNEMYTEALNTYQLLTRNKLFPHA---NRLKVNMGNIYFKMGEHPKAL-- 252
VL NL +YALNE+YT N + + PH + + + G + ++G HP A+
Sbjct: 78 VLQNLKSRYALNEIYTYTGNILIAVNPFQRLPHLYNNHMMGIYKGAEFGELGPHPFAIAD 137
Query: 253 KLYRMALD 260
+ YR+ ++
Sbjct: 138 RSYRLMIN 145
>09_06_0376 - 22694914-22696071,22696111-22696416
Length = 487
Score = 32.7 bits (71), Expect = 0.45
Identities = 47/197 (23%), Positives = 78/197 (39%), Gaps = 14/197 (7%)
Query: 24 VDEDDELYSGFNEVAPALDTRNLREDETFQETLRTAGIGRKLPSRTGTGMVRLGTVS--- 80
V+E EV R++ E ET ++ L A I +++ G ++ ++
Sbjct: 115 VEEGRRSVEAMVEVGRKAHRRHVSELETRKKVL--AEIAKEVEEERGAALIATTVMNEAQ 172
Query: 81 --MR-DVGSRSGTSARPVTALRAAGYTSASRDRPMPTQHLEDSVEDRVKQMEARIMALVE 137
+R GS + + A A G A+ R E + R + +EAR MAL E
Sbjct: 173 DTLRLQYGSWEAELGKKLDA--AQGVLDAAAAREQRAAETEAASRRREEALEARAMALEE 230
Query: 138 ESCLLSARPDPDDDSTTRKEHDLGQALAKAQEASTMERQLIRMQEQANLGDTHNLDLTFA 197
+C++ + + T +E LA + A E +R++E A L+ A
Sbjct: 231 RACVVERDLADREAAVTIRE----ATLAAHEAACAEEEFTLRLREDALTERERALEGAEA 286
Query: 198 VLCNLADQYALNEMYTE 214
V LA +L E E
Sbjct: 287 VAQQLAVNLSLREAAQE 303
>04_03_0874 +
20467608-20468306,20468575-20468736,20470083-20470160,
20470636-20470714,20470809-20470954,20471064-20471132,
20471262-20471430,20471526-20471776
Length = 550
Score = 31.9 bits (69), Expect = 0.79
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 66 PSRTGTGMVRLGTVSMRDVGSRSGTSARPVTALRAAGYTSASRDRPMPTQHLEDS 120
PS G+ R+G+ S + +R G+S RPV A +SAS RP + L DS
Sbjct: 161 PSSGNNGLRRMGSGSSNN--ARIGSSRRPVAWPPVAVRSSASGSRPSSPRSLADS 213
>06_03_1357 + 29543922-29545058,29545632-29545784,29545904-29546050
Length = 478
Score = 31.5 bits (68), Expect = 1.0
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 191 NLDLTFAVLCNLADQYALNEMYTEALNTYQLLTRNKLFPHANRLKVNMGNIYFKMGEHPK 250
NL L+ ++ C LA+ YA + + +N QL+ + P+ L + + N + G H +
Sbjct: 361 NLQLSPSIFCVLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNL-LINAFGTAGRHLE 419
Query: 251 ALKLYRMALD 260
AL + + D
Sbjct: 420 ALAVLQHIKD 429
>04_03_0532 -
16824394-16824447,16824545-16824665,16824748-16824875,
16825457-16825603,16825682-16825807,16825895-16826160,
16826259-16826453,16826577-16826657,16826756-16826830,
16827270-16827530,16827633-16827719,16827844-16828060
Length = 585
Score = 31.5 bits (68), Expect = 1.0
Identities = 25/85 (29%), Positives = 34/85 (40%)
Query: 174 ERQLIRMQEQANLGDTHNLDLTFAVLCNLADQYALNEMYTEALNTYQLLTRNKLFPHANR 233
E L+R+ Q G T V N Y + + E L N A
Sbjct: 353 EVALVRLPPQHAFGSTETKQDLAVVPANSTVWYEVELVSFEKEKESWDLKDNAEKIEAAA 412
Query: 234 LKVNMGNIYFKMGEHPKALKLYRMA 258
K + GN++FKMG++ KA K Y A
Sbjct: 413 KKKDEGNVWFKMGKYAKASKRYEKA 437
>11_01_0149 + 1247985-1248207,1248982-1249508
Length = 249
Score = 31.1 bits (67), Expect = 1.4
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 107 SRDRPMPTQHLEDSVEDRV-KQMEARIM--ALVEESCLLSARPDPDDDSTTRKEHDLGQA 163
+ D M L VED + +Q+ A IM +VE+S + + D+D + E++ G
Sbjct: 146 NEDDHMGWYSLASVVEDTMDQQVGADIMDQQVVEDSLVTDTMEESDEDEYLKAEYEKGAL 205
Query: 164 LAKAQEASTMERQ 176
+ EA+ +ER+
Sbjct: 206 IFARDEANALERK 218
>10_06_0106 + 10827301-10827523,10828298-10828824
Length = 249
Score = 31.1 bits (67), Expect = 1.4
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 107 SRDRPMPTQHLEDSVEDRV-KQMEARIM--ALVEESCLLSARPDPDDDSTTRKEHDLGQA 163
+ D M L VED + +Q+ A IM +VE+S + + D+D + E++ G
Sbjct: 146 NEDDHMGWYSLASVVEDTMDQQVGADIMDQQVVEDSLVTDTMEESDEDEYLKAEYEKGAL 205
Query: 164 LAKAQEASTMERQ 176
+ EA+ +ER+
Sbjct: 206 IFARDEANALERK 218
>08_01_0727 +
6567935-6568112,6568197-6568912,6569061-6569162,
6569236-6569547,6569862-6570299
Length = 581
Score = 31.1 bits (67), Expect = 1.4
Identities = 24/101 (23%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Query: 73 MVRLGTVSMRDVGSRSGTSARPVTALRAAGYTSASRDRPMPTQHLEDSVEDRVKQMEARI 132
+ + T + + +G S T + +AAG + D +P + V+D R+
Sbjct: 63 LAQADTEARKMIGDVSVTEFSQLLTRQAAGRVNRVYDGELPPRANTHKVDDDAGPSRKRM 122
Query: 133 MALVEESCLLSARPDPD-DDSTTRKEHDLGQALAKAQEAST 172
V+++ PD D DD T KE+D + + EA++
Sbjct: 123 RGQVKKAPRKRRAPDSDADDEETVKENDGEEEDVRETEAAS 163
>04_03_0590 + 17621148-17621370,17622145-17622671
Length = 249
Score = 31.1 bits (67), Expect = 1.4
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 107 SRDRPMPTQHLEDSVEDRV-KQMEARIM--ALVEESCLLSARPDPDDDSTTRKEHDLGQA 163
+ D M L VED + +Q+ A IM +VE+S + + D+D + E++ G
Sbjct: 146 NEDDHMGWYSLASVVEDTMDQQVGADIMDQQVVEDSLVTDTMEESDEDEYLKAEYEKGAL 205
Query: 164 LAKAQEASTMERQ 176
+ EA+ +ER+
Sbjct: 206 IFARDEANALERK 218
>03_03_0244 - 15772156-15773964,15774190-15774711
Length = 776
Score = 31.1 bits (67), Expect = 1.4
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 103 YTSASRDRPMPTQHLEDSVEDRVKQMEARIMALVEESCLLSARPDPDDDSTTR-KEHDLG 161
+T + +R + + E ++ K+ E R+ L E + + + +EH LG
Sbjct: 293 HTVLASERDIAAKRAEQAIS-AAKETEKRVEELTLELIAIKESLESAHAAHHEAEEHKLG 351
Query: 162 QALAKAQEASTMERQLIRMQEQ 183
ALAK Q+ E++L + QE+
Sbjct: 352 AALAKEQDCLAWEKELQQAQEE 373
>03_02_0143 -
5888005-5888088,5888818-5888949,5889485-5889634,
5890540-5890710,5890840-5891007,5891139-5891234,
5891777-5891839,5891949-5892114,5892207-5892274,
5892646-5892789,5893111-5893176,5893329-5893520,
5894567-5894657,5895241-5895329,5895521-5895583,
5895698-5895823,5895902-5895991,5896059-5896181,
5896503-5896619,5896704-5896904,5897643-5897723,
5897897-5897977,5898083-5898184,5898264-5898488,
5898571-5898726,5898798-5899010,5899306-5899455,
5900082-5900204,5900299-5900364,5900555-5900620,
5900686-5900817,5900891-5900965,5901355-5901438,
5901516-5901668,5901741-5901806,5902044-5902205,
5902272-5902388,5902495-5902566,5902702-5902761,
5902869-5902985,5904131-5904430,5904518-5904622,
5905710-5905775,5905853-5906297,5906399-5906567,
5906684-5906736,5906819-5906925
Length = 1981
Score = 31.1 bits (67), Expect = 1.4
Identities = 17/46 (36%), Positives = 23/46 (50%)
Query: 22 IIVDEDDELYSGFNEVAPALDTRNLREDETFQETLRTAGIGRKLPS 67
II+DE L V AL R LR+ E+ Q +R G+ LP+
Sbjct: 565 IIIDEVHLLNDDRGSVIEALVARTLRQVESMQSMIRIVGLSATLPT 610
>01_06_1547 -
38150814-38151488,38151608-38151666,38151774-38151919,
38152078-38152274,38152542-38152920,38153000-38153031
Length = 495
Score = 30.7 bits (66), Expect = 1.8
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 262 TPTAEKDLSDAEGGKAAFHAMLDVEPPTYHQ-DIPI-DDEKDTYECVVRDVSRGDKL 316
T E SD+E G+ +A D + + DIP DD++D VVRDV+ G+++
Sbjct: 216 TSVLEASDSDSEDGEDPNNASADEQSTIENSADIPSGDDDEDLEMIVVRDVNEGEEV 272
>04_04_1350 +
32822711-32823063,32823681-32823803,32823890-32823986,
32824135-32824170,32824257-32824444,32824688-32824790,
32824914-32825095,32825184-32825261,32825800-32825902,
32825983-32826019,32826117-32826511
Length = 564
Score = 30.3 bits (65), Expect = 2.4
Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 85 GSRSGTSA-RPVTALRAAGYTSASRDRPMPTQHLEDSVEDRVKQMEARIMALVEESCLLS 143
GS SG+S+ R A A+G ++ P+ T +V D E+ ++ ++ E +
Sbjct: 434 GSGSGSSSSRAAAATTASGVNNSQA--PVDTSA---NVPDGSAMEESHVLPVINEEAANN 488
Query: 144 ARPDPDDDSTTRKEHDLGQALAKAQE 169
DD++ +E D+ + A+ +E
Sbjct: 489 VEAVNDDETVNHEEEDMSEESAEGEE 514
>06_03_0975 -
26471438-26472109,26472189-26472284,26472372-26472482,
26472494-26472530,26472566-26472576,26472674-26473050,
26474310-26474895
Length = 629
Score = 29.5 bits (63), Expect = 4.2
Identities = 16/44 (36%), Positives = 20/44 (45%)
Query: 133 MALVEESCLLSARPDPDDDSTTRKEHDLGQALAKAQEASTMERQ 176
MAL C L A P P + HD ALA + AS + R+
Sbjct: 1 MALAPPLCHLLAAPPPSTSAAADAAHDHAGALAPHRRASPLRRR 44
>06_03_0791 -
24641350-24641418,24641684-24641965,24642318-24642537,
24642657-24642776,24643056-24643132,24643220-24643339,
24644121-24644186,24644265-24644479,24645450-24645582,
24646562-24646708,24647301-24647596,24648222-24648319,
24648425-24648471,24649340-24649449,24649663-24649735,
24650795-24650899
Length = 725
Score = 29.5 bits (63), Expect = 4.2
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 210 EMYTEALNTYQLLTRNKLFPHANRLKVNMGNIYFKMGEHPKALKLYRMALDQTPTA 265
+ Y +AL+ + L ++ PH + + MG IY ++ KA+ + +ALD P A
Sbjct: 643 QKYPDALDELERL--KEIAPHESSMYALMGKIYKQLNILDKAVFCFGIALDLKPPA 696
>10_07_0081 -
12716130-12716271,12716367-12716449,12716729-12716785,
12716886-12716942,12717014-12717113,12717204-12717274,
12718284-12718460,12719142-12719312,12722151-12722234,
12722310-12722354,12722447-12722537,12722745-12722863,
12723213-12723434,12723630-12723854,12725366-12725571,
12726081-12726258,12726702-12726762,12727930-12728039,
12728126-12728257,12729136-12729208,12729608-12729645,
12730373-12730474,12730565-12730622,12731071-12731172,
12731240-12731386,12732023-12732159,12732256-12732405,
12733103-12733259,12733615-12733673,12733982-12734138,
12734209-12734354,12739177-12739320,12739478-12739606
Length = 1309
Score = 29.1 bits (62), Expect = 5.5
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 164 LAKAQEASTMERQLIRMQEQANLGDTHNLD-LTF----AVLCNLADQYALNEMYT 213
LA +A ++++ +A+LG ++ L + VLCNLA +Y NE+YT
Sbjct: 38 LAGGAKAVVDGKKVLPRDTEADLGGVDDMTKLVYLHEPGVLCNLARRYGFNEIYT 92
>08_01_0107 -
789217-789984,790070-790219,790303-790890,790968-791093
Length = 543
Score = 29.1 bits (62), Expect = 5.5
Identities = 17/65 (26%), Positives = 30/65 (46%)
Query: 84 VGSRSGTSARPVTALRAAGYTSASRDRPMPTQHLEDSVEDRVKQMEARIMALVEESCLLS 143
+G ++GT++ +TA++ A + + D P L D +D + E R + S
Sbjct: 1 MGKKAGTTSSWLTAVKRAFRSPSKDDSPNKAARLRDDTDDDKGKRERRRWLFRKSSSPSP 60
Query: 144 ARPDP 148
A P P
Sbjct: 61 APPTP 65
>02_04_0082 - 19559626-19560152,19560927-19561149
Length = 249
Score = 29.1 bits (62), Expect = 5.5
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 121 VEDRV-KQMEARIM--ALVEESCLLSARPDPDDDSTTRKEHDLGQALAKAQEASTMERQ 176
VED + +Q+ A IM +VE+S + + D+D + E++ G + EA+ +ER+
Sbjct: 160 VEDTMDQQVGADIMDQQVVEDSLVTYTMEESDEDEYLKAEYEKGALIFARDEANALERK 218
>12_01_0639 +
5383967-5385951,5386973-5387066,5387410-5387841,
5387935-5388219,5388324-5388641,5388756-5388983,
5389264-5389364,5389447-5389552,5389782-5390132,
5390262-5390401,5390687-5390861,5390937-5390954
Length = 1410
Score = 28.7 bits (61), Expect = 7.3
Identities = 14/60 (23%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 202 LADQYALNEMYTEALNTYQLLTRNKLFPHANRLKVNMGNIYFKMGEHPKALKLYRMALDQ 261
+ + YA+N+ + EAL + + N+ P+ V + I G H +AL+++ + +
Sbjct: 576 IIEAYAINQRHKEALELFAWMLSNRFVPNNGTFDVLL-RICEAAGLHDEALQIFNSMVQE 634
>05_05_0251 + 23616546-23617760
Length = 404
Score = 28.7 bits (61), Expect = 7.3
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 242 YFKMGEHPKALKLYRMALDQTPTAEKDLSDAEGGKAAFHAM-----LDVEP-PTYHQDIP 295
+++MG+H ALK R+++ T + +L D + AFH + L V P P +H+D
Sbjct: 164 FWRMGQHQAALKRTRISV-PTIMSATNLEDVIHHRGAFHFLTGEENLHVFPVPGFHED-- 220
Query: 296 IDDEKDTYECVVRDVSRGDK 315
+ + V+R SRG +
Sbjct: 221 GNGNLEIPPMVIRRFSRGGR 240
>02_03_0272 -
17146578-17146691,17146806-17146926,17147260-17147365,
17147469-17147551,17147688-17147815,17147897-17147983,
17148064-17148174,17148502-17148669,17148753-17148837,
17148921-17149037,17149127-17149203,17149299-17149370,
17150538-17150634,17150750-17150952,17151115-17151217,
17151324-17151391,17151461-17151514,17151595-17151704,
17151982-17152060,17152171-17152233,17153410-17153529,
17153913-17153969,17154071-17154187,17156426-17156476,
17156591-17156689,17156787-17156935,17158090-17158312
Length = 953
Score = 28.7 bits (61), Expect = 7.3
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 7/77 (9%)
Query: 226 KLFPHANRLKVNMGNIYFKMGEHPKALKLYRMALDQTPTAEKDLSDAEGGKAAFH---AM 282
KL P +N GN+Y MG +A+ Y+ A+ P D + A G A +
Sbjct: 276 KLKPSFADAYLNQGNVYKTMGMSQEAIISYQRAVQARP----DYAMAYGNLATIYYEQGQ 331
Query: 283 LDVEPPTYHQDIPIDDE 299
LD+ Y+Q I D +
Sbjct: 332 LDIAIRCYNQAIICDPQ 348
Score = 28.7 bits (61), Expect = 7.3
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Query: 199 LCNLADQYALNEMYTEALNTYQLLTRNKLFPHANRLKVNMGNIYFKMGEHPKALKLYRMA 258
L NLA Y Y +A+ Y + R + P A VN GN + ++G +A++ Y A
Sbjct: 421 LNNLAVIYKQQGNYADAITCYTEVLR--VDPTAADALVNRGNTFKEIGRVNEAIQDYIQA 478
Query: 259 LDQTPT-AEKDLSDAEGGKAAFH 280
PT AE + A K + H
Sbjct: 479 ATIRPTMAEAHANLASAYKDSGH 501
>11_04_0013 - 12208818-12209344,12209976-12210198
Length = 249
Score = 28.3 bits (60), Expect = 9.7
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 126 KQMEARIM--ALVEESCLLSARPDPDDDSTTRKEHDLGQALAKAQEASTMERQ 176
+Q+ A IM +VE+S + + D+D + E++ G + EA+ +ER+
Sbjct: 166 QQVVADIMDQQVVEDSLVTDTMEESDEDEYLKAEYEKGALIFTRDEANALERK 218
>11_01_0420 - 3230936-3231710,3232265-3233885,3234411-3234834
Length = 939
Score = 28.3 bits (60), Expect = 9.7
Identities = 25/122 (20%), Positives = 59/122 (48%), Gaps = 5/122 (4%)
Query: 150 DDSTTRKEHDLGQALAKAQEASTMERQLIRMQEQANLGDTHNLDLTFAVLCNLADQYALN 209
DD+ ++ +DL A + E +++ + +++ + D N+D T A+ + ++ A N
Sbjct: 500 DDTHSKGSNDLLTQYANSNEHNSLLTRTLKIFSTTDNSDGDNVDSTSAISSSFSNMTA-N 558
Query: 210 EMYTEALNTYQLLTRNKLFPHANRLKVNMGNIYFKMGEHPKALKLYRMALDQTPTAEKDL 269
+ +++ LN + + + H++R V+ N K+G K+ ++ A + + D
Sbjct: 559 D-HSDKLNVKENVGNTII--HSSR-SVDTSNAEHKVGFIEKSKGIFSWAAKWWASGKPDT 614
Query: 270 SD 271
D
Sbjct: 615 DD 616
>06_03_1131 +
27872870-27872958,27873036-27873281,27874058-27874163,
27874665-27875209,27875455-27875914,27876234-27876319,
27877092-27877194
Length = 544
Score = 28.3 bits (60), Expect = 9.7
Identities = 24/105 (22%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Query: 116 HLEDSVEDRVKQMEARIMALVEESCL-LSARPDPDDDSTTRKEHDLGQALAKAQEASTME 174
++E + + +V + +AL+++ L + A ++ T E LG++ A QE +E
Sbjct: 119 NIEMNGQYKVLTYSSNTIALMQQGGLRIQAGEKRKEEETVELEGSLGKSNAVNQELVALE 178
Query: 175 RQLIRMQEQANLGDTHNLDLTFAVLCNLADQYALNEMYTEALNTY 219
R+L + + D+ L L VL + + + E++N+Y
Sbjct: 179 RELATHRRTGAI-DSFCLYLYGIVLRDKGSEALARTVLVESVNSY 222
>05_07_0021 - 27100249-27101838,27102434-27102547
Length = 567
Score = 28.3 bits (60), Expect = 9.7
Identities = 18/60 (30%), Positives = 22/60 (36%)
Query: 50 ETFQETLRTAGIGRKLPSRTGTGMVRLGTVSMRDVGSRSGTSARPVTALRAAGYTSASRD 109
E QE R G RKL M GT RD + + TS+ + R G D
Sbjct: 144 EVMQELDRVKGELRKLQREVMAAMAAKGTAGRRDAEAEASTSSAVSSGPRGGGGVERDAD 203
>05_05_0147 +
22715144-22715444,22716245-22716407,22716484-22716532,
22716626-22716739,22716812-22717234,22717307-22717693,
22717777-22717872,22717978-22718093,22718137-22718272,
22718392-22718480,22718586-22718736,22719057-22719185,
22719276-22719354,22719435-22719544
Length = 780
Score = 28.3 bits (60), Expect = 9.7
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 53 QETLRTAGIGRKLPSRTGTGMVRLGTVSMRDVG-SRSGTSARP-VTALRAAGYTSASRD 109
Q TL +K PSR +GM RL ++ + R+ +SA+P + LR TSA +D
Sbjct: 15 QSTLPPVAPLKKQPSRLASGMKRLASMVPDTMKLKRTHSSAQPALRGLRFLDKTSAGKD 73
>02_05_1283 - 35444811-35445146,35445428-35445613,35445700-35445834
Length = 218
Score = 28.3 bits (60), Expect = 9.7
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 139 SCLLSARPDPDDDSTTRKEHDLGQALAKAQEASTMERQ 176
+ L+SA PDPDD T + L + A A+ + ++ +
Sbjct: 84 AALISAAPDPDDAITASADSALTEVTAPAEATAMVDEE 121
>02_04_0157 +
20388761-20388763,20389807-20389935,20390206-20390349,
20390690-20390835,20390915-20391071,20391312-20391370,
20391466-20391664,20392232-20392381,20392471-20392607,
20392717-20392863,20392975-20393076,20395655-20395712,
20395816-20395917,20396236-20396273,20396409-20396535,
20397092-20397259,20397356-20397487,20400222-20400331,
20400400-20400460,20400929-20401106,20401194-20401399,
20401552-20401671,20402523-20402621,20404177-20404386,
20404704-20404843,20404945-20405053,20405351-20405431,
20405523-20405693,20405825-20405974,20407029-20407202,
20407453-20407479,20407688-20407758,20407843-20407942,
20408305-20408361,20409457-20409513,20409656-20409736,
20410336-20410421,20410535-20410649
Length = 1466
Score = 28.3 bits (60), Expect = 9.7
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 198 VLCNLADQYALNEMYTEALNTYQLLTRNKLFPHA---NRLKVNMGNIYFKMGEHPKAL-- 252
VL NL +Y +NE+YT N + + PH + +++ G + ++ HP A+
Sbjct: 78 VLHNLKSRYGMNEIYTYTGNILIAVNPFQRLPHLYNNHMMEIYKGAGFGELSPHPFAIAD 137
Query: 253 KLYRMALD 260
+ YR ++
Sbjct: 138 RAYRYMMN 145
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.314 0.130 0.367
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,530,075
Number of Sequences: 37544
Number of extensions: 387640
Number of successful extensions: 914
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 902
Number of HSP's gapped (non-prelim): 34
length of query: 349
length of database: 14,793,348
effective HSP length: 83
effective length of query: 266
effective length of database: 11,677,196
effective search space: 3106134136
effective search space used: 3106134136
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 60 (28.3 bits)
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