Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000907-TA|BGIBMGA000907-PA|IPR013026|Tetratricopeptide
region, IPR013105|Tetratricopeptide TPR_2
(349 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49436| Best HMM Match : TPR_3 (HMM E-Value=0.51) 95 1e-19
SB_12855| Best HMM Match : TPR_2 (HMM E-Value=2.3e-12) 46 5e-05
SB_49875| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.065
SB_20575| Best HMM Match : TPR_1 (HMM E-Value=0) 33 0.26
SB_8404| Best HMM Match : TPR_1 (HMM E-Value=0) 33 0.26
SB_12498| Best HMM Match : TPR_1 (HMM E-Value=0) 33 0.46
SB_38926| Best HMM Match : TPR_1 (HMM E-Value=0) 33 0.46
SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.60
SB_20329| Best HMM Match : TPR_1 (HMM E-Value=0) 32 0.80
SB_44596| Best HMM Match : COX6A (HMM E-Value=5.4) 31 1.1
SB_52151| Best HMM Match : TPR_1 (HMM E-Value=0) 31 1.4
SB_21411| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_46516| Best HMM Match : TPR_1 (HMM E-Value=0) 31 1.8
SB_37148| Best HMM Match : TPR_1 (HMM E-Value=0) 31 1.8
SB_49350| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_24315| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_16367| Best HMM Match : TPR_1 (HMM E-Value=0) 30 2.4
SB_7278| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_17728| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0032) 30 2.4
SB_27347| Best HMM Match : TPR_1 (HMM E-Value=0) 30 3.2
SB_1436| Best HMM Match : Glu_synthase (HMM E-Value=0) 30 3.2
SB_20801| Best HMM Match : Sas10_Utp3 (HMM E-Value=0.46) 30 3.2
SB_12128| Best HMM Match : TPR_1 (HMM E-Value=4.7e-21) 30 3.2
SB_35649| Best HMM Match : M (HMM E-Value=6e-09) 29 4.3
SB_50860| Best HMM Match : TPR_1 (HMM E-Value=0) 29 4.3
SB_42742| Best HMM Match : TPR_1 (HMM E-Value=1.3e-18) 29 4.3
SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_29231| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_25367| Best HMM Match : TPR_1 (HMM E-Value=2.4e-40) 29 5.6
SB_20703| Best HMM Match : TPR_1 (HMM E-Value=0) 29 5.6
SB_45953| Best HMM Match : LRR_1 (HMM E-Value=7.4e-15) 29 5.6
SB_29141| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_22290| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 29 5.6
SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_27046| Best HMM Match : TPR_1 (HMM E-Value=3.7e-10) 29 7.4
SB_6794| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.4
SB_51830| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.4
SB_51642| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.4
SB_39021| Best HMM Match : M (HMM E-Value=5.3e-06) 29 7.4
SB_19825| Best HMM Match : TPR_2 (HMM E-Value=4.8e-30) 29 7.4
SB_18588| Best HMM Match : zf-C2H2 (HMM E-Value=0.0061) 29 7.4
SB_56776| Best HMM Match : CRA_rpt (HMM E-Value=5.6e-17) 28 9.8
SB_25386| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_51502| Best HMM Match : TPR_2 (HMM E-Value=0) 28 9.8
SB_42562| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_30515| Best HMM Match : Lyase_8 (HMM E-Value=1.2e-05) 28 9.8
>SB_49436| Best HMM Match : TPR_3 (HMM E-Value=0.51)
Length = 101
Score = 94.7 bits (225), Expect = 1e-19
Identities = 51/110 (46%), Positives = 70/110 (63%), Gaps = 12/110 (10%)
Query: 122 EDRVKQMEARIMALVEESCLLSARPDPDDDSTTRKEHDLGQALAKAQEASTMERQLIRMQ 181
E++VKQ+E ++ L+EESC +A LG AL KA+EA ER L R +
Sbjct: 3 EEKVKQLEKKVNELIEESCFANAAGQ------------LGLALEKAKEAGRKERSLCRQR 50
Query: 182 EQANLGDTHNLDLTFAVLCNLADQYALNEMYTEALNTYQLLTRNKLFPHA 231
EQ L + NLDLT++VL NLA+QY N+ Y EALNTYQ++ +NK+F +A
Sbjct: 51 EQTALSEQINLDLTYSVLFNLANQYHANKNYNEALNTYQVIVKNKMFSNA 100
>SB_12855| Best HMM Match : TPR_2 (HMM E-Value=2.3e-12)
Length = 567
Score = 46.0 bits (104), Expect = 5e-05
Identities = 18/32 (56%), Positives = 25/32 (78%)
Query: 238 MGNIYFKMGEHPKALKLYRMALDQTPTAEKDL 269
MGNIYF+ ++P+A+K YRMALDQ P K++
Sbjct: 1 MGNIYFEQKKYPQAIKHYRMALDQVPNTHKEM 32
>SB_49875| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 456
Score = 35.5 bits (78), Expect = 0.065
Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 76 LGTVSMRDVGSRSGTSARPVTALRAAGYTSASRDRPMPTQHLEDSVEDRVKQMEARIMAL 135
+ T SM + +GT+ R A + A ++ + V++R++++ + +MA
Sbjct: 1 MSTSSMELLEVPNGTAVRHGDEDVAKDHGIAEENQAFIMEIQSKQVQERMRKLSSIVMAY 60
Query: 136 VEESCLLSARPDPDDDSTTRKEHDLGQA 163
E + SA+PD D+ TT EH++ +A
Sbjct: 61 ENE--IPSAKPDEDNSKTTYGEHEVDKA 86
>SB_20575| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 1106
Score = 33.5 bits (73), Expect = 0.26
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 212 YTEALNTYQ--LLTRNKLFPHANRLKV--NMGNIYFKMGEHPKALKLYRMALDQTPTAEK 267
Y +A+N++Q L K + K MGN++F G++ AL Y+ AL + +
Sbjct: 131 YEDAMNSFQHALSLFQKTGDERGQAKAYHGMGNVHFNQGKYEDALNNYQHAL----SLFQ 186
Query: 268 DLSDAEGGKAAFHAMLDV 285
D G +A+H M DV
Sbjct: 187 KTGDESGQASAYHGMGDV 204
>SB_8404| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 1981
Score = 33.5 bits (73), Expect = 0.26
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Query: 199 LCNLADQYALNEMYTEALNTYQ--LLTRNKLFPHANRLKV--NMGNIYFKMGEHPKALKL 254
L NL + Y+ +T A+ Y+ L +L HA K N+G +F +G H +A+K
Sbjct: 561 LSNLGNFYSSCGEFTNAVPYYEKFLNVTRQLGDHAGECKACHNLGFAHFSLGNHSEAVKF 620
Query: 255 YRMALDQTPTAEKDLSD 271
Y ++ KDL D
Sbjct: 621 Y----ERNVALAKDLDD 633
>SB_12498| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 495
Score = 32.7 bits (71), Expect = 0.46
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Query: 162 QALAKAQEASTMERQLIRMQEQA-NLGDTHNLDLTF-AVLCNLADQYALNEMYTEALNTY 219
Q L +EA +Q +++ E+ N D ++ AV +L + + Y +AL Y
Sbjct: 352 QRLGNYEEAMKYYQQALQVFERTGNESDQADVRQNIGAVQDSLGNYEEAMKYYQQALQVY 411
Query: 220 QLLTRNKLFPHANRLKVNMGNIYFKMGEHPKALKLYRMAL 259
+ T N+ H +++N+G + +G + +A+K Y+ AL
Sbjct: 412 -ISTGNE--SHQADVRLNIGGVQESLGNYEEAMKYYQQAL 448
Score = 30.3 bits (65), Expect = 2.4
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 8/107 (7%)
Query: 158 HDLG---QALAKAQEASTMERQLIRMQEQA-NLGDTHNLDLTFA-VLCNLADQYALNEMY 212
H++G Q L +EA +Q +++ E+ N ++ L V L + + Y
Sbjct: 185 HNIGVVQQCLGNYEEAMKYYQQALQVYERTGNESKQASVRLNIGGVQQRLGNYEEAMKYY 244
Query: 213 TEALNTYQLLTRNKLFPHANRLKVNMGNIYFKMGEHPKALKLYRMAL 259
+AL Y + T N+ + RL N+G + ++G + +A+K Y+ AL
Sbjct: 245 QQALQVY-ISTGNESKQASVRL--NIGGVQQRLGNYEEAMKYYQQAL 288
>SB_38926| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 375
Score = 32.7 bits (71), Expect = 0.46
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Query: 162 QALAKAQEASTMERQLIRMQEQA-NLGDTHNLDLTF-AVLCNLADQYALNEMYTEALNTY 219
Q L +EA +Q +++ E+ N D ++ AV +L + + Y +AL Y
Sbjct: 232 QRLGNYEEAMKYYQQALQVFERTGNESDQADVRQNIGAVQDSLGNYEEAMKYYQQALQVY 291
Query: 220 QLLTRNKLFPHANRLKVNMGNIYFKMGEHPKALKLYRMAL 259
+ T N+ H +++N+G + +G + +A+K Y+ AL
Sbjct: 292 -ISTGNE--SHQADVRLNIGGVQESLGNYEEAMKYYQQAL 328
>SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2916
Score = 32.3 bits (70), Expect = 0.60
Identities = 16/69 (23%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 117 LEDSVEDRVKQMEARIMALVEESCLLSARPDPDDDSTTRKEHDLGQALAKAQEASTMERQ 176
L D +D Q+ R ++E L R D + + R HD G++ + +E +++ +
Sbjct: 22 LRDMCQDYRGQLARREQEIIELKAELHKRDDLEP-AGQRHRHDSGESFEEHEEIKSLKNE 80
Query: 177 LIRMQEQAN 185
++R+Q + +
Sbjct: 81 IVRLQTECH 89
>SB_20329| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 330
Score = 31.9 bits (69), Expect = 0.80
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 8/101 (7%)
Query: 159 DLGQALAKAQEASTMERQLIRMQEQANLGDTHNLDLTFAVLCNLADQYALNEMYTEALNT 218
D GQA+ + A + + EQA++ +N+ F +L D E Y AL
Sbjct: 36 DNGQAMENYKHALCIYEKFGEECEQADV--YNNIGSVFK---SLGDNGQAMENYKHALCI 90
Query: 219 YQLLTRNKLFPHANRLKVNMGNIYFKMGEHPKALKLYRMAL 259
Y+ + AN N+GN Y+ +G++ +A++ Y+ AL
Sbjct: 91 YEKFGEER--KQANVYN-NIGNTYYSLGDNGQAMENYKNAL 128
Score = 28.3 bits (60), Expect = 9.8
Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
Query: 159 DLGQALAKAQEASTMERQLIRMQEQANLGDTHNLDLTFAVLCNLADQYALNEMYTEALNT 218
D GQA+ + A + + ++QAN+ +N+ T+ +L D E Y AL
Sbjct: 76 DNGQAMENYKHALCIYEKFGEERKQANV--YNNIGNTYY---SLGDNGQAMENYKNALCI 130
Query: 219 YQLLTRNKLFPHANRLKVNMGNIYFKMGEHPKALKLYRMAL 259
+ + ++GN YF +G++ +A++ Y+ AL
Sbjct: 131 LEKFGEERKQADVYN---HIGNTYFSLGDNGQAMENYKKAL 168
>SB_44596| Best HMM Match : COX6A (HMM E-Value=5.4)
Length = 227
Score = 31.5 bits (68), Expect = 1.1
Identities = 20/70 (28%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 159 DLGQALAKAQEASTMERQLIRMQEQANLGDTHNLDLTFAVLCNLADQYALNEMYTEALNT 218
DL +LAK+ +ST E + ++ AN + H+ + + L N+A+ Y L++ ++E +T
Sbjct: 12 DLQYSLAKSY-SSTPELREAWLENMANTHEAHD-NFSEVWLVNMANTYELHDDFSEERHT 69
Query: 219 YQLLTRNKLF 228
+ R+K +
Sbjct: 70 LYVRARSKSY 79
>SB_52151| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 1137
Score = 31.1 bits (67), Expect = 1.4
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 12/103 (11%)
Query: 159 DLGQALAKAQEASTMERQLIRMQEQANLGDTHNLDLTFAVLCNLADQYALNEMYTEALNT 218
D GQA+ + A + + +EQA++ + + AV +L D E Y AL
Sbjct: 36 DNGQAMLNYKNALCIYEKFGEEREQADVYSSIS-----AVYQSLGDNGQAMENYKHALCI 90
Query: 219 YQLLTRNKLFPHANRLKV--NMGNIYFKMGEHPKALKLYRMAL 259
Y+ KL R V N+GN++ +G++ +A++ Y+ AL
Sbjct: 91 YE-----KLGEERKRADVYNNIGNVFKSLGDNGQAMENYKHAL 128
>SB_21411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 308
Score = 31.1 bits (67), Expect = 1.4
Identities = 12/22 (54%), Positives = 16/22 (72%)
Query: 199 LCNLADQYALNEMYTEALNTYQ 220
LC+ A+ Y L EMY EA+N +Q
Sbjct: 157 LCDRAEAYILEEMYNEAVNDFQ 178
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 31.1 bits (67), Expect = 1.4
Identities = 37/151 (24%), Positives = 61/151 (40%), Gaps = 9/151 (5%)
Query: 25 DEDDELYSGFNEVAPAL---DTRNLREDETFQETLRTAGIGRKLPSRTGTGMVRLGTVSM 81
D+D+EL G E+A AL D + Q + ++G R P TG + T +M
Sbjct: 769 DDDEELDLGLEELADALLEEDRKKAAAQMQTQAQVHSSGPRRARPGSTGEPGI---TATM 825
Query: 82 RDVGSRSGTSARPVTALRAAGYTSASRDRPMPTQHLEDSVEDRVKQMEARIMALVEESC- 140
+ SR + + G +S + LE +E R K++ + E+
Sbjct: 826 SE-DSREAPEGGFESISGSPGGSSTEAGTGPSREELERDLESRKKEVNQYKKIINEQQQE 884
Query: 141 LLSARP-DPDDDSTTRKEHDLGQALAKAQEA 170
L +RP D +D + + LA A +A
Sbjct: 885 LAKSRPLDGEDSGSQPSKPSFSNDLASAVKA 915
>SB_46516| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 363
Score = 30.7 bits (66), Expect = 1.8
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 8/101 (7%)
Query: 159 DLGQALAKAQEASTMERQLIRMQEQANLGDTHNLDLTFAVLCNLADQYALNEMYTEALNT 218
D GQA+ + A + + ++QA++ +N+ + F +L D E Y AL
Sbjct: 204 DNGQAMVNYKHALCIYEKFGEERKQADV--YNNIGVVFM---SLGDNGKAMENYKNALCI 258
Query: 219 YQLLTRNKLFPHANRLKVNMGNIYFKMGEHPKALKLYRMAL 259
Y+ AN + N GN Y+ +G++ +A+ Y+ AL
Sbjct: 259 YEKFGEE--CKQAN-VYSNFGNTYYSLGDNGQAMVNYKHAL 296
>SB_37148| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 1073
Score = 30.7 bits (66), Expect = 1.8
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 197 AVLCNLADQYALNEMYTEALNTYQLLTRNKLFPHANRLKVNMGNIYFKMGEHPKALKLYR 256
A++ N+ + E+Y AL +Q + A N+G +Y M EHP+A K +
Sbjct: 436 AIIANIYNSVEAMELYRSALALFQ--KHGDVIRQAETWH-NIGTLYLNMSEHPEAEKKLK 492
Query: 257 MAL 259
+L
Sbjct: 493 ESL 495
>SB_49350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 998
Score = 30.3 bits (65), Expect = 2.4
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 159 DLGQALAKAQEASTMERQLIRMQEQANLGDTHNLDLTF 196
+ GQA+ KA E S E+ +I++ + D H +D+ +
Sbjct: 48 EAGQAIGKATEISGDEKLMIKLSTAIDTSDAHAIDIKY 85
>SB_24315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 231
Score = 30.3 bits (65), Expect = 2.4
Identities = 12/42 (28%), Positives = 23/42 (54%)
Query: 159 DLGQALAKAQEASTMERQLIRMQEQANLGDTHNLDLTFAVLC 200
+ GQA+ KA E S E+ ++++ + D H +D+ + C
Sbjct: 145 EAGQAIRKATEISGDEKLIVKLSTAIDTSDAHAIDIKYHNKC 186
>SB_16367| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 635
Score = 30.3 bits (65), Expect = 2.4
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 6/75 (8%)
Query: 212 YTEALNTYQ--LLTRNKLFPHANRLKV--NMGNIYFKMGEHPKALKLYRMALD--QTPTA 265
Y +A+N++Q L K + K MGN++F G++ AL Y+ AL Q
Sbjct: 274 YEDAMNSFQHALSLFQKTGDERGQAKAYHGMGNVHFNQGKYEDALNNYQHALSLFQKTGD 333
Query: 266 EKDLSDAEGGKAAFH 280
E DA G H
Sbjct: 334 ESGQGDAYHGMGGVH 348
>SB_7278| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 498
Score = 30.3 bits (65), Expect = 2.4
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 8/111 (7%)
Query: 149 DDDSTTRKEHDLGQALAKAQEASTMERQLIRMQEQANLGDTHNLDLTFAVLCNLADQYAL 208
D ST K H+ +AL +++ + +EQA G N+ A+ +L D
Sbjct: 114 DMGSTYNKFHNYNKALDYYKQSLNAYMKTGEEREQA--GVYKNIG---AIYSSLGDDGQA 168
Query: 209 NEMYTEALNTYQLLTRNKLFPHANRLKVNMGNIYFKMGEHPKALKLYRMAL 259
Y AL Y+ L + A+ + N+GN Y+ +G++ +A++ Y+ AL
Sbjct: 169 ILNYKNALCIYEKLGEER--KQAD-VYGNIGNTYYSLGDNGQAMENYKNAL 216
>SB_17728| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0032)
Length = 1293
Score = 30.3 bits (65), Expect = 2.4
Identities = 29/118 (24%), Positives = 56/118 (47%), Gaps = 8/118 (6%)
Query: 122 EDRVKQMEARIMALVEESCLLSARPDPDDDSTTRKEHDLGQALAKAQEASTMERQLIRMQ 181
+D Q+ R ++E L R D + + R HD G++ + +E +++ +++R+Q
Sbjct: 3 QDYRGQLARREQEIIELKAELHKRDDLEP-AGQRHRHDSGESFEEHEEIKSLKNEIVRLQ 61
Query: 182 EQAN--LGDTHNLDLTFAVLCNLADQYALNEMYTEALNTY--QLLTRNKLFPHANRLK 235
+ + + N D + L DQY NE+ + NTY ++ NK F + L+
Sbjct: 62 TECHHWKSMSSNQD-SQEKLHREIDQYQ-NEL-SALQNTYSQKIANLNKKFKEVDNLE 116
>SB_27347| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 280
Score = 29.9 bits (64), Expect = 3.2
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 212 YTEALNTYQ--LLTRNKLFPHANRLKV--NMGNIYFKMGEHPKALKLYRMALDQTPTAEK 267
Y +A+N++Q L K + K MGN++F G++ AL Y+ AL + +
Sbjct: 77 YKDAMNSFQNALSLFQKTGDERGQAKAYHGMGNVHFNQGKYEDALNNYQHAL----SLFQ 132
Query: 268 DLSDAEGGKAAFHAMLDV 285
D G A+H M +V
Sbjct: 133 KTGDESGQGDAYHGMGNV 150
>SB_1436| Best HMM Match : Glu_synthase (HMM E-Value=0)
Length = 304
Score = 29.9 bits (64), Expect = 3.2
Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Query: 57 RTAGIGRKLPSRTGTGMVRLGTVSMR-DV----GSRSGTSARPVTALRAAG 102
R A I KL S G G V G + DV G GT A P+T+L+ AG
Sbjct: 135 REARINVKLVSEVGIGTVAAGVAKAKGDVILISGHDGGTGASPLTSLKHAG 185
>SB_20801| Best HMM Match : Sas10_Utp3 (HMM E-Value=0.46)
Length = 521
Score = 29.9 bits (64), Expect = 3.2
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 162 QALAKAQEASTMERQLIRMQEQANLGDTHNLDLTFAVLC 200
QA+ KA E S E+ ++++ N D H +D+ + C
Sbjct: 18 QAIPKATEISGDEKLMVKLSSAINASDAHAIDIKYHNKC 56
>SB_12128| Best HMM Match : TPR_1 (HMM E-Value=4.7e-21)
Length = 230
Score = 29.9 bits (64), Expect = 3.2
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 201 NLADQYALNEMYTEALNTYQL-LTRNKLFPHANRLK---VNMGNIYFKMGEHPKALKLYR 256
NLA+ Y ++E + AL +Q L + N + ++GNIY MG+ P +++ Y+
Sbjct: 131 NLANIYEMDEDFQAALECHQKRLAISHELKDTNAIGKSCASLGNIYHVMGDLPASIRFYQ 190
Query: 257 MAL 259
L
Sbjct: 191 EML 193
>SB_35649| Best HMM Match : M (HMM E-Value=6e-09)
Length = 1279
Score = 29.5 bits (63), Expect = 4.3
Identities = 15/51 (29%), Positives = 30/51 (58%)
Query: 119 DSVEDRVKQMEARIMALVEESCLLSARPDPDDDSTTRKEHDLGQALAKAQE 169
DS+ + ++ +E+ I+ EE+ LL ++ DST+ K+ +L + A +E
Sbjct: 1011 DSMRENLQSIESEIIQRNEENSLLQSQLISFRDSTSEKDEELHKLRALTEE 1061
>SB_50860| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 933
Score = 29.5 bits (63), Expect = 4.3
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 212 YTEALNTYQ--LLTRNKLFPHANRLK--VNMGNIYFKMGEHPKALKLYRMALDQTPTAEK 267
Y +A+N YQ L K + + K + MGN++ G++ A+ Y+ AL + +
Sbjct: 491 YEDAMNNYQHALSLFQKTGDESGQAKAYLGMGNVHRSQGKYEDAMNNYQHAL----SLFQ 546
Query: 268 DLSDAEGGKAAFHAMLDV 285
D G +A+H M +V
Sbjct: 547 KTGDESGQASAYHCMGNV 564
Score = 29.1 bits (62), Expect = 5.6
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 212 YTEALNTYQ--LLTRNKLFPHANRLKV--NMGNIYFKMGEHPKALKLYRMALD--QTPTA 265
Y +A+N+++ L K + + K MGN++F G++ AL Y+ AL Q
Sbjct: 91 YEDAMNSFKNALSLFQKTGDESGQAKAYHGMGNVHFNQGKYEDALNNYQHALSLFQKTGD 150
Query: 266 EKDLSDAEGGKAAFH 280
E+ +DA G H
Sbjct: 151 ERGQADAYLGMGNVH 165
Score = 28.7 bits (61), Expect = 7.4
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 212 YTEALNTYQ--LLTRNKLFPHANRLKV--NMGNIYFKMGEHPKALKLYRMAL 259
Y +ALN YQ L K + + K MGN++F G++ A+ Y+ AL
Sbjct: 291 YKDALNNYQRALSLFQKTGDVSGQAKAYHGMGNVHFNQGKYEDAMNNYQHAL 342
>SB_42742| Best HMM Match : TPR_1 (HMM E-Value=1.3e-18)
Length = 232
Score = 29.5 bits (63), Expect = 4.3
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 8/111 (7%)
Query: 149 DDDSTTRKEHDLGQALAKAQEASTMERQLIRMQEQANLGDTHNLDLTFAVLCNLADQYAL 208
D ST K H+ +AL +++ + +EQA G N+ A+ +L D
Sbjct: 114 DMGSTYNKFHNYNKALDYYKQSLNAYMKTGEEREQA--GVYKNIG---AIYSSLGDDGQA 168
Query: 209 NEMYTEALNTYQLLTRNKLFPHANRLKVNMGNIYFKMGEHPKALKLYRMAL 259
Y AL Y+ L + A+ + N+GN Y+ +G+ +A++ Y+ AL
Sbjct: 169 ILNYKNALCIYEKLGEER--KQAD-VYGNIGNTYYSLGDKGQAMENYKHAL 216
>SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1512
Score = 29.5 bits (63), Expect = 4.3
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 6/77 (7%)
Query: 212 YTEALNTYQLLTRNKLFPHANRLKVNMGNIYFKMGEHPKALKLYRMALDQTPTAEKDLSD 271
Y AL Y+ + + LF N K + Y EH K +YR + P D++D
Sbjct: 411 YQSALRHYEDIVSH-LF---NTFKASYRKRYPSAHEHEKRKDIYRHNMSLKPNHMADMTD 466
Query: 272 AEGGKAAFHAMLDVEPP 288
AE + +L EPP
Sbjct: 467 AEVNR--MKGLLHEEPP 481
>SB_29231| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2271
Score = 29.1 bits (62), Expect = 5.6
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 212 YTEALNTYQ--LLTRNKLFPHANRLKV--NMGNIYFKMGEHPKALKLYRMALD--QTPTA 265
Y +A+N YQ L K + + K MGN+++ G++ A+ ++ AL Q
Sbjct: 515 YEDAMNNYQRALSLFQKTGDESGQAKAYRGMGNVHWSQGKYEDAMNNFQHALSLFQKAGD 574
Query: 266 EKDLSDAEGGKAAFHAML 283
++ ++A G A H ++
Sbjct: 575 QEGQANAYGAVACIHGVI 592
>SB_25367| Best HMM Match : TPR_1 (HMM E-Value=2.4e-40)
Length = 553
Score = 29.1 bits (62), Expect = 5.6
Identities = 16/61 (26%), Positives = 29/61 (47%)
Query: 204 DQYALNEMYTEALNTYQLLTRNKLFPHANRLKVNMGNIYFKMGEHPKALKLYRMALDQTP 263
D + + E+L Q ++ L L N+G+ + K G++ +AL Y+ AL P
Sbjct: 413 DYLQAEKHFKESLQKAQKVSGEVLSQTWESLMTNLGHTFRKQGKYEEALSCYQQALVLIP 472
Query: 264 T 264
+
Sbjct: 473 S 473
>SB_20703| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 693
Score = 29.1 bits (62), Expect = 5.6
Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 158 HDLG---QALAKAQEASTMERQLIRMQEQA-NLGDTHNLDLTFAVLCNLADQYA-LNEMY 212
H++G Q+L +EA +Q + + E+ N D ++ V+ + Y + Y
Sbjct: 416 HNIGVVQQSLRNYEEAMKYYQQALPVFERTGNESDQADVRKNIGVVQQILGNYEEAMKYY 475
Query: 213 TEALNTYQLLTRNKLFPHANRLKVNMGNIYFKMGEHPKALKLYRMAL 259
+AL Y + T N+ RL N+G + +G + +A+K ++ AL
Sbjct: 476 QQALQVY-ISTGNESKQAGVRL--NIGGVQQSLGNYEEAMKYFQQAL 519
Score = 28.7 bits (61), Expect = 7.4
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 162 QALAKAQEASTMERQLIRMQEQA-NLGDTHNLDLTFA-VLCNLADQYALNEMYTEALNTY 219
Q+L +EA +Q +++ E+ N D + + V +L + + Y +AL +
Sbjct: 503 QSLGNYEEAMKYFQQALQVFERTGNESDQAGVRMNIGGVQQSLGNYEEAMKYYQQALQVF 562
Query: 220 QLLTRNKLFPHANRLKVNMGNIYFKMGEHPKALKLYRMAL 259
+ T N+ RL N+G + ++G + +A+K Y+ AL
Sbjct: 563 ER-TGNESDQAGVRL--NIGGVQRRLGNYEEAMKYYQQAL 599
>SB_45953| Best HMM Match : LRR_1 (HMM E-Value=7.4e-15)
Length = 1427
Score = 29.1 bits (62), Expect = 5.6
Identities = 17/61 (27%), Positives = 29/61 (47%)
Query: 118 EDSVEDRVKQMEARIMALVEESCLLSARPDPDDDSTTRKEHDLGQALAKAQEASTMERQL 177
E +V V + + + LV+E S DD+T R +H+L Q ++ +ER L
Sbjct: 278 ERTVNTGVSRKKRNLDQLVQEDSRNSEYGHAPDDTTQRGKHNLDQRQNTMADSGFLERSL 337
Query: 178 I 178
+
Sbjct: 338 V 338
>SB_29141| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1331
Score = 29.1 bits (62), Expect = 5.6
Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 6/85 (7%)
Query: 202 LADQYALNEMYTEALNTYQ--LLTRNKLFPHANRLKV--NMGNIYFKMGEHPKALKLYRM 257
+ D + Y +A+N YQ L K + K MGN++F G++ AL Y+
Sbjct: 434 MGDAHRSQGKYEDAMNNYQHALSLFQKTGDECVQAKAYHGMGNVHFNHGKYEDALNNYQH 493
Query: 258 ALD--QTPTAEKDLSDAEGGKAAFH 280
AL Q E DA G H
Sbjct: 494 ALSLFQKTGDESGQGDAYLGMGDAH 518
>SB_22290| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 485
Score = 29.1 bits (62), Expect = 5.6
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 239 GNIYFKMGEHPKALKLYRMALDQTPTAEK 267
GN YFK G+ P A K Y A+ + P K
Sbjct: 372 GNEYFKKGDFPSAQKHYTEAIKRNPEDAK 400
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 29.1 bits (62), Expect = 5.6
Identities = 25/118 (21%), Positives = 49/118 (41%), Gaps = 4/118 (3%)
Query: 107 SRDRPMPTQHLEDSVEDRVKQMEARIMALVEESCLLSARPDPDDDSTTRKEHDLGQALAK 166
SR++ + + E++VK M + L E CLL++ + R++ +L A K
Sbjct: 2684 SRNKIFRLEGAARTSEEKVKSMSEELQKLEENVCLLTSSLATAQEKQERQQKELLDANKK 2743
Query: 167 AQE----ASTMERQLIRMQEQANLGDTHNLDLTFAVLCNLADQYALNEMYTEALNTYQ 220
+ + ME + R+Q++ L +L + L +Q L + Y+
Sbjct: 2744 SSDHEIAFKNMEARKERLQQEVILAKQREGELQNNLQKALKEQTNLKTQLNDLQERYE 2801
>SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1507
Score = 29.1 bits (62), Expect = 5.6
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 109 DRPMPTQHLEDSVEDRVKQMEARIMALVEESCLLSARPDPDDDSTTRK-EHDLGQAL--- 164
D Q+LED + +++ + I L E++ A D D + T K HDL ++L
Sbjct: 845 DERTVVQNLEDRIGGLIQKHDVEINQLKEKAKEHQASTDEDASAITSKLRHDLEESLRTN 904
Query: 165 -AKAQEASTMERQLIRMQEQ 183
K +E ++ +L +Q++
Sbjct: 905 SKKTEEVLELQEKLELIQQE 924
>SB_27046| Best HMM Match : TPR_1 (HMM E-Value=3.7e-10)
Length = 98
Score = 28.7 bits (61), Expect = 7.4
Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Query: 195 TFAVLCNLADQYALNEMYTEALNTYQLLTRNKLFPHANRLKVNMGNIYFKMGEHPKALKL 254
TF ++ + Y A+ YQ R L P N GN+YF+ + +AL
Sbjct: 19 TFGAFVDMNEALKYMGDYVNAVRDYQAAIR--LEPSYALSYYNAGNVYFRQRQFKQALSY 76
Query: 255 YRMAL 259
+ AL
Sbjct: 77 FNKAL 81
>SB_6794| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1042
Score = 28.7 bits (61), Expect = 7.4
Identities = 10/25 (40%), Positives = 18/25 (72%)
Query: 238 MGNIYFKMGEHPKALKLYRMALDQT 262
+GN+Y+ +GE+ A++ Y+ AL T
Sbjct: 388 IGNVYYALGEYDHAIEYYQQALPIT 412
>SB_51830| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 582
Score = 28.7 bits (61), Expect = 7.4
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 239 GNIYFKMGEHPKALKLYRMALDQTPTAEK-DLSDAEGGKAAFHAMLD 284
GN YFK ++ +A+K Y A++ P K DLS +AA + ++
Sbjct: 148 GNKYFKGCKYEQAIKCYTEAIELCPPENKQDLSTFYQNRAAAYEQMN 194
>SB_51642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 570
Score = 28.7 bits (61), Expect = 7.4
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Query: 197 AVLCNLADQY-ALNEMYTEALNTYQLLTRNKLFPHANRLKVNMGNIYFKMGEHPKALKLY 255
A+LC +Y + + Y AL Y P+ + K N+ + Y K G++ A LY
Sbjct: 329 ALLCQNQGKYDEVEQYYQRALEIYTTKLGPD-DPNVAKTKNNLASAYLKQGKYKAAETLY 387
Query: 256 RMALDQTPTAE 266
+ L + E
Sbjct: 388 KQVLTRAHERE 398
>SB_39021| Best HMM Match : M (HMM E-Value=5.3e-06)
Length = 1691
Score = 28.7 bits (61), Expect = 7.4
Identities = 30/116 (25%), Positives = 45/116 (38%), Gaps = 3/116 (2%)
Query: 110 RPMPTQHLEDSVEDRVKQMEARIMALVEESCLLSARPDPDDDSTTRKEHDLGQALAKAQE 169
R T++ E E VK +E A EE+ + R + T+ L L K+
Sbjct: 1394 REKMTENKEVMTEFSVKDIELLETANSEETYVSHERGTDQEMMTSLSLEQL-DLLEKSHL 1452
Query: 170 ASTMERQLIRMQEQANLGDTHNLDLTFAVLCNLADQYALNEMYTEALNTYQLLTRN 225
+ E QL+R +Q G+ +D D L YTE L Q++ N
Sbjct: 1453 DQSRELQLLR--DQLKDGERKTVDREIMTDLQWEDILHLETAYTEQLEELQVIAEN 1506
>SB_19825| Best HMM Match : TPR_2 (HMM E-Value=4.8e-30)
Length = 592
Score = 28.7 bits (61), Expect = 7.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 239 GNIYFKMGEHPKALKLYRMALDQTPT 264
G++ FK E+ KAL Y +AL+ PT
Sbjct: 23 GDVLFKQEEYQKALDSYSLALELKPT 48
>SB_18588| Best HMM Match : zf-C2H2 (HMM E-Value=0.0061)
Length = 503
Score = 28.7 bits (61), Expect = 7.4
Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Query: 122 EDRVKQMEA--RIMALVEESCLLSARPDPDDDSTTRKEHDLGQALAKAQEASTMERQLIR 179
E +Q+EA ++ E L+S DDDS+ RKE ++ + +E ++++
Sbjct: 66 ETHAEQLEAGSKLPESTNEGSLISF----DDDSSPRKESEVSRLSLHLKELEDKTQEILN 121
Query: 180 MQEQAN 185
+Q++ N
Sbjct: 122 LQQELN 127
>SB_56776| Best HMM Match : CRA_rpt (HMM E-Value=5.6e-17)
Length = 905
Score = 28.3 bits (60), Expect = 9.8
Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Query: 115 QHLEDSVEDRVKQMEARIMALVEESCLLSARPDPDDDSTTRKEHDLGQALAKAQEASTME 174
+H +ED VK + V+ S + RP S + Q AK Q+ E
Sbjct: 334 KHSATVIEDAVKHSATVVGDAVKRSATVIERPPKGKTSNPQVNKTCEQHEAKLQDVKATE 393
Query: 175 RQLIRMQEQANLGDTHN 191
++I+ + N+G T N
Sbjct: 394 EKMIKSK---NIGATCN 407
>SB_25386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 695
Score = 28.3 bits (60), Expect = 9.8
Identities = 12/40 (30%), Positives = 22/40 (55%)
Query: 260 DQTPTAEKDLSDAEGGKAAFHAMLDVEPPTYHQDIPIDDE 299
D+ TA DL ++ A H + D + P+Y Q++P ++
Sbjct: 295 DEESTASTDLLFSDEEDAVEHEVHDQKVPSYEQEVPTGED 334
>SB_51502| Best HMM Match : TPR_2 (HMM E-Value=0)
Length = 1161
Score = 28.3 bits (60), Expect = 9.8
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 212 YTEALNTYQ--LLTRNKLFPHANRLKV--NMGNIYFKMGEHPKALKLYRMALDQTPTAEK 267
Y +A+N YQ L K + + K MGN+Y G++ A+ Y+ AL + +
Sbjct: 234 YEDAMNNYQHVLSLFQKTGDVSGQAKAYHGMGNVYRSHGKYEDAMNNYQHAL----SLFQ 289
Query: 268 DLSDAEGGKAAFHAMLDVE 286
D G A+H M V+
Sbjct: 290 KTGDESGQAEAYHGMGKVQ 308
>SB_42562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 28.3 bits (60), Expect = 9.8
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 239 GNIYFKMGEHPKALKLYRMALDQTPT 264
GN+ FK ++ +A+KLY AL+Q T
Sbjct: 127 GNLAFKQQKYEEAVKLYTQALNQDRT 152
>SB_30515| Best HMM Match : Lyase_8 (HMM E-Value=1.2e-05)
Length = 1364
Score = 28.3 bits (60), Expect = 9.8
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 196 FAVLCNLADQYALNEMYTEALNTYQLLTRNKLFPHANRLKVNMGNIYFKMGEHPKALKLY 255
+AV+ D L + E L++ + + K P A G ++FK EH A +Y
Sbjct: 1108 YAVVLAGGDSNKLFKYSVEKLDSVAHIVKFKDLPSAG--SETFGYVFFKGNEHVTAGPVY 1165
Query: 256 RMALDQTPTAEKDLSD 271
R++ T E++ D
Sbjct: 1166 RVSASCTLMTERESRD 1181
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.314 0.130 0.367
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,870,561
Number of Sequences: 59808
Number of extensions: 428557
Number of successful extensions: 987
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 909
Number of HSP's gapped (non-prelim): 109
length of query: 349
length of database: 16,821,457
effective HSP length: 83
effective length of query: 266
effective length of database: 11,857,393
effective search space: 3154066538
effective search space used: 3154066538
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 60 (28.3 bits)
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