Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000907-TA|BGIBMGA000907-PA|IPR013026|Tetratricopeptide
region, IPR013105|Tetratricopeptide TPR_2
(349 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U20362-1|AAA86720.1| 824|Homo sapiens Tg737 protein. 176 1e-43
BC030776-1|AAH30776.2| 833|Homo sapiens intraflagellar transpor... 175 1e-43
AL590096-4|CAM20430.1| 824|Homo sapiens intraflagellar transpor... 175 1e-43
AL590096-3|CAI14390.2| 833|Homo sapiens intraflagellar transpor... 175 1e-43
AL161772-3|CAM13405.1| 824|Homo sapiens intraflagellar transpor... 175 1e-43
AL161772-2|CAH70874.2| 833|Homo sapiens intraflagellar transpor... 175 1e-43
BX640833-1|CAE45907.1| 371|Homo sapiens hypothetical protein pr... 131 3e-30
AL590096-5|CAI14391.1| 50|Homo sapiens intraflagellar transpor... 38 0.040
BC103727-1|AAI03728.1| 619|Homo sapiens kinesin light chain 4 p... 33 1.5
BC080637-1|AAH80637.1| 619|Homo sapiens kinesin light chain 4 p... 33 1.5
AL355385-3|CAI13781.1| 619|Homo sapiens protein ( Human DNA seq... 33 1.5
AL162078-1|CAB82411.1| 355|Homo sapiens hypothetical protein pr... 33 1.5
AK127894-1|BAC87179.1| 625|Homo sapiens protein ( Homo sapiens ... 33 1.5
U03109-1|AAA82108.1| 757|Homo sapiens aspartyl beta-hydroxylase... 33 2.0
S83325-1|AAB50779.1| 758|Homo sapiens aspartyl(asparaginyl)beta... 33 2.0
BC065555-1|AAH65555.1| 607|Homo sapiens translocase of outer mi... 33 2.0
BC052994-1|AAH52994.1| 608|Homo sapiens translocase of outer mi... 33 2.0
BC036112-1|AAH36112.1| 786|Homo sapiens suppressor of var1, 3-l... 33 2.0
BC008782-1|AAH08782.1| 1219|Homo sapiens nuclear factor of kappa... 33 2.0
BC003633-1|AAH03633.1| 608|Homo sapiens translocase of outer mi... 33 2.0
AL596223-2|CAH71499.1| 786|Homo sapiens suppressor of var1, 3-l... 33 2.0
AK127018-1|BAC86788.1| 335|Homo sapiens protein ( Homo sapiens ... 33 2.0
AJ249601-1|CAB63467.1| 559|Homo sapiens IkappaBR protein. 33 2.0
AF042169-1|AAB97370.1| 786|Homo sapiens putative ATP-dependent ... 33 2.0
AB018262-1|BAA34439.2| 624|Homo sapiens KIAA0719 protein protein. 33 2.0
BC014109-1|AAH14109.1| 670|Homo sapiens leucine rich repeat con... 32 3.4
L04733-1|AAA16576.1| 569|Homo sapiens kinesin light chain protein. 31 4.6
BC008881-1|AAH08881.1| 560|Homo sapiens kinesin light chain 1 p... 31 4.6
AY180164-1|AAO62549.1| 556|Homo sapiens kinesin light chain 1C ... 31 4.6
AF267530-1|AAF72543.1| 569|Homo sapiens kinesin light-chain pro... 31 4.6
AB209765-1|BAD93002.1| 397|Homo sapiens methyl-CpG binding doma... 31 4.6
EF488685-1|ABP02056.1| 536|Homo sapiens methyl-CpG binding doma... 31 6.0
AJ564845-1|CAD92308.1| 550|Homo sapiens methyl-CpG binding doma... 31 6.0
AF078833-1|AAD51445.1| 503|Homo sapiens methyl-CpG binding prot... 31 6.0
AF078831-1|AAD51443.1| 586|Homo sapiens methyl-CpG binding prot... 31 6.0
>U20362-1|AAA86720.1| 824|Homo sapiens Tg737 protein.
Length = 824
Score = 176 bits (428), Expect = 1e-43
Identities = 112/271 (41%), Positives = 154/271 (56%), Gaps = 39/271 (14%)
Query: 26 EDDELYSGFNEVAPALDTRNLREDETFQETLRTAG-----IGRKLPSRTGTGMVRLGTVS 80
++D+LYSG+N+ P D L D FQ+ +RT+ I K+ S T + G S
Sbjct: 12 DEDDLYSGYNDYNPIYDIEELENDAAFQQAVRTSHGRRPPITAKISSTAVTRPIATGYGS 71
Query: 81 MRDVGSRSG---TSA------RPVTALRAAGYTSA----SRDRPM-----PTQHLE---- 118
+ S G T A RP+TA+RAAG+T A S P+ P LE
Sbjct: 72 KTSLASSIGRPMTGAIQDGVTRPMTAVRAAGFTKAALRGSAFDPLSQSRGPASPLEAKKK 131
Query: 119 DSVEDRVKQMEARIMALVEESCLLSARPDPDDDSTTRKEHDLGQALAKAQEASTMERQLI 178
DS E+++KQ+E + LVEESC+ ++ D L AL KA++A ER L+
Sbjct: 132 DSPEEKIKQLEKEVNELVEESCIANSCGD------------LKLALEKAKDAGRKERVLV 179
Query: 179 RMQEQANLGDTHNLDLTFAVLCNLADQYALNEMYTEALNTYQLLTRNKLFPHANRLKVNM 238
R +EQ + NLDLT++VL NLA QY++NEMY EALNTYQ++ +NK+F +A LK+NM
Sbjct: 180 RQREQVTTPENINLDLTYSVLSNLASQYSVNEMYAEALNTYQVIVKNKMFSNAGILKMNM 239
Query: 239 GNIYFKMGEHPKALKLYRMALDQTPTAEKDL 269
GNIY K + KA+K YRMALDQ P+ K +
Sbjct: 240 GNIYLKQRNYSKAIKFYRMALDQVPSVNKQM 270
>BC030776-1|AAH30776.2| 833|Homo sapiens intraflagellar transport
88 homolog (Chlamydomonas) protein.
Length = 833
Score = 175 bits (427), Expect = 1e-43
Identities = 112/271 (41%), Positives = 154/271 (56%), Gaps = 39/271 (14%)
Query: 26 EDDELYSGFNEVAPALDTRNLREDETFQETLRTAG-----IGRKLPSRTGTGMVRLGTVS 80
++D+LYSG+N+ P D L D FQ+ +RT+ I K+ S T + G S
Sbjct: 21 DEDDLYSGYNDYNPIYDIEELENDAAFQQAVRTSHGRRPPITAKISSTAVTRPIATGYGS 80
Query: 81 MRDVGSRSG---TSA------RPVTALRAAGYTSA----SRDRPM-----PTQHLE---- 118
+ S G T A RP+TA+RAAG+T A S P+ P LE
Sbjct: 81 KTSLASSIGRPMTGAIQDGVTRPMTAVRAAGFTKAALRGSAFDPLSQSRGPASPLEAKKK 140
Query: 119 DSVEDRVKQMEARIMALVEESCLLSARPDPDDDSTTRKEHDLGQALAKAQEASTMERQLI 178
DS E+++KQ+E + LVEESC+ ++ D L AL KA++A ER L+
Sbjct: 141 DSPEEKIKQLEKEVNELVEESCIANSCGD------------LKLALEKAKDAGRKERVLV 188
Query: 179 RMQEQANLGDTHNLDLTFAVLCNLADQYALNEMYTEALNTYQLLTRNKLFPHANRLKVNM 238
R +EQ + NLDLT++VL NLA QY++NEMY EALNTYQ++ +NK+F +A LK+NM
Sbjct: 189 RQREQVTTPENINLDLTYSVLFNLASQYSVNEMYAEALNTYQVIVKNKMFSNAGILKMNM 248
Query: 239 GNIYFKMGEHPKALKLYRMALDQTPTAEKDL 269
GNIY K + KA+K YRMALDQ P+ K +
Sbjct: 249 GNIYLKQRNYSKAIKFYRMALDQVPSVNKQM 279
>AL590096-4|CAM20430.1| 824|Homo sapiens intraflagellar transport
88 homolog (Chlamydomonas) protein.
Length = 824
Score = 175 bits (427), Expect = 1e-43
Identities = 112/271 (41%), Positives = 154/271 (56%), Gaps = 39/271 (14%)
Query: 26 EDDELYSGFNEVAPALDTRNLREDETFQETLRTAG-----IGRKLPSRTGTGMVRLGTVS 80
++D+LYSG+N+ P D L D FQ+ +RT+ I K+ S T + G S
Sbjct: 12 DEDDLYSGYNDYNPIYDIEELENDAAFQQAVRTSHGRRPPITAKISSTAVTRPIATGYGS 71
Query: 81 MRDVGSRSG---TSA------RPVTALRAAGYTSA----SRDRPM-----PTQHLE---- 118
+ S G T A RP+TA+RAAG+T A S P+ P LE
Sbjct: 72 KTSLASSIGRPMTGAIQDGVTRPMTAVRAAGFTKAALRGSAFDPLSQSRGPASPLEAKKK 131
Query: 119 DSVEDRVKQMEARIMALVEESCLLSARPDPDDDSTTRKEHDLGQALAKAQEASTMERQLI 178
DS E+++KQ+E + LVEESC+ ++ D L AL KA++A ER L+
Sbjct: 132 DSPEEKIKQLEKEVNELVEESCIANSCGD------------LKLALEKAKDAGRKERVLV 179
Query: 179 RMQEQANLGDTHNLDLTFAVLCNLADQYALNEMYTEALNTYQLLTRNKLFPHANRLKVNM 238
R +EQ + NLDLT++VL NLA QY++NEMY EALNTYQ++ +NK+F +A LK+NM
Sbjct: 180 RQREQVTTPENINLDLTYSVLFNLASQYSVNEMYAEALNTYQVIVKNKMFSNAGILKMNM 239
Query: 239 GNIYFKMGEHPKALKLYRMALDQTPTAEKDL 269
GNIY K + KA+K YRMALDQ P+ K +
Sbjct: 240 GNIYLKQRNYSKAIKFYRMALDQVPSVNKQM 270
>AL590096-3|CAI14390.2| 833|Homo sapiens intraflagellar transport
88 homolog (Chlamydomonas) protein.
Length = 833
Score = 175 bits (427), Expect = 1e-43
Identities = 112/271 (41%), Positives = 154/271 (56%), Gaps = 39/271 (14%)
Query: 26 EDDELYSGFNEVAPALDTRNLREDETFQETLRTAG-----IGRKLPSRTGTGMVRLGTVS 80
++D+LYSG+N+ P D L D FQ+ +RT+ I K+ S T + G S
Sbjct: 21 DEDDLYSGYNDYNPIYDIEELENDAAFQQAVRTSHGRRPPITAKISSTAVTRPIATGYGS 80
Query: 81 MRDVGSRSG---TSA------RPVTALRAAGYTSA----SRDRPM-----PTQHLE---- 118
+ S G T A RP+TA+RAAG+T A S P+ P LE
Sbjct: 81 KTSLASSIGRPMTGAIQDGVTRPMTAVRAAGFTKAALRGSAFDPLSQSRGPASPLEAKKK 140
Query: 119 DSVEDRVKQMEARIMALVEESCLLSARPDPDDDSTTRKEHDLGQALAKAQEASTMERQLI 178
DS E+++KQ+E + LVEESC+ ++ D L AL KA++A ER L+
Sbjct: 141 DSPEEKIKQLEKEVNELVEESCIANSCGD------------LKLALEKAKDAGRKERVLV 188
Query: 179 RMQEQANLGDTHNLDLTFAVLCNLADQYALNEMYTEALNTYQLLTRNKLFPHANRLKVNM 238
R +EQ + NLDLT++VL NLA QY++NEMY EALNTYQ++ +NK+F +A LK+NM
Sbjct: 189 RQREQVTTPENINLDLTYSVLFNLASQYSVNEMYAEALNTYQVIVKNKMFSNAGILKMNM 248
Query: 239 GNIYFKMGEHPKALKLYRMALDQTPTAEKDL 269
GNIY K + KA+K YRMALDQ P+ K +
Sbjct: 249 GNIYLKQRNYSKAIKFYRMALDQVPSVNKQM 279
>AL161772-3|CAM13405.1| 824|Homo sapiens intraflagellar transport
88 homolog (Chlamydomonas) protein.
Length = 824
Score = 175 bits (427), Expect = 1e-43
Identities = 112/271 (41%), Positives = 154/271 (56%), Gaps = 39/271 (14%)
Query: 26 EDDELYSGFNEVAPALDTRNLREDETFQETLRTAG-----IGRKLPSRTGTGMVRLGTVS 80
++D+LYSG+N+ P D L D FQ+ +RT+ I K+ S T + G S
Sbjct: 12 DEDDLYSGYNDYNPIYDIEELENDAAFQQAVRTSHGRRPPITAKISSTAVTRPIATGYGS 71
Query: 81 MRDVGSRSG---TSA------RPVTALRAAGYTSA----SRDRPM-----PTQHLE---- 118
+ S G T A RP+TA+RAAG+T A S P+ P LE
Sbjct: 72 KTSLASSIGRPMTGAIQDGVTRPMTAVRAAGFTKAALRGSAFDPLSQSRGPASPLEAKKK 131
Query: 119 DSVEDRVKQMEARIMALVEESCLLSARPDPDDDSTTRKEHDLGQALAKAQEASTMERQLI 178
DS E+++KQ+E + LVEESC+ ++ D L AL KA++A ER L+
Sbjct: 132 DSPEEKIKQLEKEVNELVEESCIANSCGD------------LKLALEKAKDAGRKERVLV 179
Query: 179 RMQEQANLGDTHNLDLTFAVLCNLADQYALNEMYTEALNTYQLLTRNKLFPHANRLKVNM 238
R +EQ + NLDLT++VL NLA QY++NEMY EALNTYQ++ +NK+F +A LK+NM
Sbjct: 180 RQREQVTTPENINLDLTYSVLFNLASQYSVNEMYAEALNTYQVIVKNKMFSNAGILKMNM 239
Query: 239 GNIYFKMGEHPKALKLYRMALDQTPTAEKDL 269
GNIY K + KA+K YRMALDQ P+ K +
Sbjct: 240 GNIYLKQRNYSKAIKFYRMALDQVPSVNKQM 270
>AL161772-2|CAH70874.2| 833|Homo sapiens intraflagellar transport
88 homolog (Chlamydomonas) protein.
Length = 833
Score = 175 bits (427), Expect = 1e-43
Identities = 112/271 (41%), Positives = 154/271 (56%), Gaps = 39/271 (14%)
Query: 26 EDDELYSGFNEVAPALDTRNLREDETFQETLRTAG-----IGRKLPSRTGTGMVRLGTVS 80
++D+LYSG+N+ P D L D FQ+ +RT+ I K+ S T + G S
Sbjct: 21 DEDDLYSGYNDYNPIYDIEELENDAAFQQAVRTSHGRRPPITAKISSTAVTRPIATGYGS 80
Query: 81 MRDVGSRSG---TSA------RPVTALRAAGYTSA----SRDRPM-----PTQHLE---- 118
+ S G T A RP+TA+RAAG+T A S P+ P LE
Sbjct: 81 KTSLASSIGRPMTGAIQDGVTRPMTAVRAAGFTKAALRGSAFDPLSQSRGPASPLEAKKK 140
Query: 119 DSVEDRVKQMEARIMALVEESCLLSARPDPDDDSTTRKEHDLGQALAKAQEASTMERQLI 178
DS E+++KQ+E + LVEESC+ ++ D L AL KA++A ER L+
Sbjct: 141 DSPEEKIKQLEKEVNELVEESCIANSCGD------------LKLALEKAKDAGRKERVLV 188
Query: 179 RMQEQANLGDTHNLDLTFAVLCNLADQYALNEMYTEALNTYQLLTRNKLFPHANRLKVNM 238
R +EQ + NLDLT++VL NLA QY++NEMY EALNTYQ++ +NK+F +A LK+NM
Sbjct: 189 RQREQVTTPENINLDLTYSVLFNLASQYSVNEMYAEALNTYQVIVKNKMFSNAGILKMNM 248
Query: 239 GNIYFKMGEHPKALKLYRMALDQTPTAEKDL 269
GNIY K + KA+K YRMALDQ P+ K +
Sbjct: 249 GNIYLKQRNYSKAIKFYRMALDQVPSVNKQM 279
>BX640833-1|CAE45907.1| 371|Homo sapiens hypothetical protein
protein.
Length = 371
Score = 131 bits (317), Expect = 3e-30
Identities = 74/172 (43%), Positives = 101/172 (58%), Gaps = 15/172 (8%)
Query: 159 DLGQALAKAQEASTMERQLIRMQEQANLGDTHNLDLTFAVLCNLADQYALNEMYTEALNT 218
DL AL KA++A ER L+R +EQ + NLDLT++VL NLA QY++NEMY EALNT
Sbjct: 1 DLKLALEKAKDAGRKERVLVRQREQVTTPENINLDLTYSVLFNLASQYSVNEMYAEALNT 60
Query: 219 YQLLTRNKLFPHANRLKVNMGNIYFKMGEHPKALKLYRMALDQTPTAEKDL--------- 269
YQ++ +NK+F +A LK+NMGNIY K + KA+K YRMALDQ P+ K +
Sbjct: 61 YQVIVKNKMFSNAGILKMNMGNIYLKQRNYSKAIKFYRMALDQVPSVNKQMRIKIMQNIG 120
Query: 270 -----SDAEGGKAAFHAMLDVEPPTYHQDIPIDDEKDTYECVVRDVSRGDKL 316
+D E K AF ++ V P +D I D + +V + + D L
Sbjct: 121 VTFIQADREKMKKAFQKLITV-PLEIDEDKYISPSDDPHTNLVTEAIKNDHL 171
>AL590096-5|CAI14391.1| 50|Homo sapiens intraflagellar transport
88 homolog (Chlamydomonas) protein.
Length = 50
Score = 38.3 bits (85), Expect = 0.040
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 26 EDDELYSGFNEVAPALDTRNLREDETFQETLRTA 59
++D+LYSG+N+ P D L D FQ+ +RT+
Sbjct: 12 DEDDLYSGYNDYNPIYDIEELENDAAFQQAVRTS 45
>BC103727-1|AAI03728.1| 619|Homo sapiens kinesin light chain 4
protein.
Length = 619
Score = 33.1 bits (72), Expect = 1.5
Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 13/124 (10%)
Query: 166 KAQEASTMERQLIRMQEQANLGDTHNLDLT-----FAVLCNLADQY-ALNEMYTEALNTY 219
K +EA + ++ + ++E+ LG H D+ A+LC +Y A+ Y AL Y
Sbjct: 310 KYKEAEPLCQRALEIREKV-LGTNHP-DVAKQLNNLALLCQNQGKYEAVERYYQRALAIY 367
Query: 220 --QLLTRNKLFPHANRLKVNMGNIYFKMGEHPKALKLYRMALDQTPTAEKDLSDAEGGKA 277
QL N P+ R K N+ + Y K G++ +A LY+ L + E D +
Sbjct: 368 EGQLGPDN---PNVARTKNNLASCYLKQGKYAEAETLYKEILTRAHVQEFGSVDDDHKPI 424
Query: 278 AFHA 281
HA
Sbjct: 425 WMHA 428
>BC080637-1|AAH80637.1| 619|Homo sapiens kinesin light chain 4
protein.
Length = 619
Score = 33.1 bits (72), Expect = 1.5
Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 13/124 (10%)
Query: 166 KAQEASTMERQLIRMQEQANLGDTHNLDLT-----FAVLCNLADQY-ALNEMYTEALNTY 219
K +EA + ++ + ++E+ LG H D+ A+LC +Y A+ Y AL Y
Sbjct: 310 KYKEAEPLCQRALEIREKV-LGTNHP-DVAKQLNNLALLCQNQGKYEAVERYYQRALAIY 367
Query: 220 --QLLTRNKLFPHANRLKVNMGNIYFKMGEHPKALKLYRMALDQTPTAEKDLSDAEGGKA 277
QL N P+ R K N+ + Y K G++ +A LY+ L + E D +
Sbjct: 368 EGQLGPDN---PNVARTKNNLASCYLKQGKYAEAETLYKEILTRAHVQEFGSVDDDHKPI 424
Query: 278 AFHA 281
HA
Sbjct: 425 WMHA 428
>AL355385-3|CAI13781.1| 619|Homo sapiens protein ( Human DNA
sequence from clone RP11-387M24 on chromosome 6. ).
Length = 619
Score = 33.1 bits (72), Expect = 1.5
Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 13/124 (10%)
Query: 166 KAQEASTMERQLIRMQEQANLGDTHNLDLT-----FAVLCNLADQY-ALNEMYTEALNTY 219
K +EA + ++ + ++E+ LG H D+ A+LC +Y A+ Y AL Y
Sbjct: 310 KYKEAEPLCQRALEIREKV-LGTNHP-DVAKQLNNLALLCQNQGKYEAVERYYQRALAIY 367
Query: 220 --QLLTRNKLFPHANRLKVNMGNIYFKMGEHPKALKLYRMALDQTPTAEKDLSDAEGGKA 277
QL N P+ R K N+ + Y K G++ +A LY+ L + E D +
Sbjct: 368 EGQLGPDN---PNVARTKNNLASCYLKQGKYAEAETLYKEILTRAHVQEFGSVDDDHKPI 424
Query: 278 AFHA 281
HA
Sbjct: 425 WMHA 428
>AL162078-1|CAB82411.1| 355|Homo sapiens hypothetical protein
protein.
Length = 355
Score = 33.1 bits (72), Expect = 1.5
Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 13/124 (10%)
Query: 166 KAQEASTMERQLIRMQEQANLGDTHNLDLT-----FAVLCNLADQY-ALNEMYTEALNTY 219
K +EA + ++ + ++E+ LG H D+ A+LC +Y A+ Y AL Y
Sbjct: 46 KYKEAEPLCQRALEIREKV-LGTNHP-DVAKQLNNLALLCQNQGKYEAVERYYQRALAIY 103
Query: 220 --QLLTRNKLFPHANRLKVNMGNIYFKMGEHPKALKLYRMALDQTPTAEKDLSDAEGGKA 277
QL N P+ R K N+ + Y K G++ +A LY+ L + E D +
Sbjct: 104 EGQLGPDN---PNVARTKNNLASCYLKQGKYAEAETLYKEILTRAHVQEFGSVDDDHKPI 160
Query: 278 AFHA 281
HA
Sbjct: 161 WMHA 164
>AK127894-1|BAC87179.1| 625|Homo sapiens protein ( Homo sapiens
cDNA FLJ46000 fis, clone SMINT2010753, highly similar
to Probable kinesin light chain 3. ).
Length = 625
Score = 33.1 bits (72), Expect = 1.5
Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 13/124 (10%)
Query: 166 KAQEASTMERQLIRMQEQANLGDTHNLDLT-----FAVLCNLADQY-ALNEMYTEALNTY 219
K +EA + ++ + ++E+ LG H D+ A+LC +Y A+ Y AL Y
Sbjct: 316 KYKEAEPLCQRALEIREKV-LGTNHP-DVAKQLNNLALLCQNQGKYEAVERYYQRALAIY 373
Query: 220 --QLLTRNKLFPHANRLKVNMGNIYFKMGEHPKALKLYRMALDQTPTAEKDLSDAEGGKA 277
QL N P+ R K N+ + Y K G++ +A LY+ L + E D +
Sbjct: 374 EGQLGPDN---PNVARTKNNLASCYLKQGKYAEAETLYKEILTRAHVQEFGSVDDDHKPI 430
Query: 278 AFHA 281
HA
Sbjct: 431 WMHA 434
>U03109-1|AAA82108.1| 757|Homo sapiens aspartyl beta-hydroxylase
protein.
Length = 757
Score = 32.7 bits (71), Expect = 2.0
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 164 LAKAQEASTMERQLIRM-QEQANLGDTHNLDLTFAVLCNLADQYALNEMYTEALNTYQLL 222
LA+ + ++ + R I QE A+L D DL L +D+ +L T Q L
Sbjct: 388 LAEKRRSNEVLRGAIETYQEVASLPDVP-ADLLKLSLKRRSDRQQFLGHMRGSLLTLQRL 446
Query: 223 TRNKLFPHANRLKVNMGNIYFKMGEHPKALKLYRMALDQTP 263
+ LFP+ LK ++G Y +G++ A K+Y L TP
Sbjct: 447 VQ--LFPNDTSLKNDLGVGYLLIGDNDNAKKVYEEVLSVTP 485
>S83325-1|AAB50779.1| 758|Homo sapiens
aspartyl(asparaginyl)beta-hydroxylase protein.
Length = 758
Score = 32.7 bits (71), Expect = 2.0
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 164 LAKAQEASTMERQLIRM-QEQANLGDTHNLDLTFAVLCNLADQYALNEMYTEALNTYQLL 222
LA+ + ++ + R I QE A+L D DL L +D+ +L T Q L
Sbjct: 388 LAEKRRSNEVLRGAIETYQEVASLPDVP-ADLLKLSLKRRSDRQQFLGHMRGSLLTLQRL 446
Query: 223 TRNKLFPHANRLKVNMGNIYFKMGEHPKALKLYRMALDQTP 263
+ LFP+ LK ++G Y +G++ A K+Y L TP
Sbjct: 447 VQ--LFPNDTSLKNDLGVGYLLIGDNDNAKKVYEEVLSVTP 485
>BC065555-1|AAH65555.1| 607|Homo sapiens translocase of outer
mitochondrial membrane 70 homolog A (S. cerevisiae)
protein.
Length = 607
Score = 32.7 bits (71), Expect = 2.0
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 237 NMGNIYFKMGEHPKALKLYRMALDQTPTAEK-DLSDAEGGKAA 278
N GN YFK G++ +A++ Y A+ PT + DLS +AA
Sbjct: 118 NKGNKYFKAGKYEQAIQCYTEAISLCPTEKNVDLSTFYQNRAA 160
>BC052994-1|AAH52994.1| 608|Homo sapiens translocase of outer
mitochondrial membrane 70 homolog A (S. cerevisiae)
protein.
Length = 608
Score = 32.7 bits (71), Expect = 2.0
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 237 NMGNIYFKMGEHPKALKLYRMALDQTPTAEK-DLSDAEGGKAA 278
N GN YFK G++ +A++ Y A+ PT + DLS +AA
Sbjct: 119 NKGNKYFKAGKYEQAIQCYTEAISLCPTEKNVDLSTFYQNRAA 161
>BC036112-1|AAH36112.1| 786|Homo sapiens suppressor of var1, 3-like
1 (S. cerevisiae) protein.
Length = 786
Score = 32.7 bits (71), Expect = 2.0
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Query: 34 FNEVAPALDTRNLREDE--TFQETLRTAGIGRKLPSRTGTGMVRLGTVSMRDVGSRSGTS 91
++ + P+++ + RE E T + L+ AG + SR G V T++ D+
Sbjct: 441 YSLIKPSINEKGERELEPITTSQALQIAGRAGRFSSRFKEGEVT--TMNHEDLSLLKEIL 498
Query: 92 ARPVTALRAAGYTSASRDRPMPTQHLEDS 120
RPV +RAAG + M HL D+
Sbjct: 499 KRPVDPIRAAGLHPTAEQIEMFAYHLPDA 527
>BC008782-1|AAH08782.1| 1219|Homo sapiens nuclear factor of kappa
light polypeptide gene enhancer in B-cells inhibitor-li
protein.
Length = 1219
Score = 32.7 bits (71), Expect = 2.0
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 191 NLDLTFAVLCNLADQYALNEMYTEALNTYQLLTRNKLFPHANRLKVNMGNIYFKMGEHPK 250
NL LTF L A N+ + +++ L +N L+ R + N+G I+++ G+H +
Sbjct: 8 NLGLTFESLQQTA---LCNDYFRKSIF---LAEQNHLYEDLFRARYNLGTIHWRAGQHSQ 61
Query: 251 ALKLYRMALDQTPTAEKDLSDAE 273
A++ A + T K ++E
Sbjct: 62 AMRCLEGARECAHTMRKRFMESE 84
>BC003633-1|AAH03633.1| 608|Homo sapiens translocase of outer
mitochondrial membrane 70 homolog A (S. cerevisiae)
protein.
Length = 608
Score = 32.7 bits (71), Expect = 2.0
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 237 NMGNIYFKMGEHPKALKLYRMALDQTPTAEK-DLSDAEGGKAA 278
N GN YFK G++ +A++ Y A+ PT + DLS +AA
Sbjct: 119 NKGNKYFKAGKYEQAIQCYTEAISLCPTEKNVDLSTFYQNRAA 161
>AL596223-2|CAH71499.1| 786|Homo sapiens suppressor of var1, 3-like
1 (S. cerevisiae) protein.
Length = 786
Score = 32.7 bits (71), Expect = 2.0
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Query: 34 FNEVAPALDTRNLREDE--TFQETLRTAGIGRKLPSRTGTGMVRLGTVSMRDVGSRSGTS 91
++ + P+++ + RE E T + L+ AG + SR G V T++ D+
Sbjct: 441 YSLIKPSINEKGERELEPITTSQALQIAGRAGRFSSRFKEGEVT--TMNHEDLSLLKEIL 498
Query: 92 ARPVTALRAAGYTSASRDRPMPTQHLEDS 120
RPV +RAAG + M HL D+
Sbjct: 499 KRPVDPIRAAGLHPTAEQIEMFAYHLPDA 527
>AK127018-1|BAC86788.1| 335|Homo sapiens protein ( Homo sapiens
cDNA FLJ45074 fis, clone BRAWH3027440, highly similar
to Probable kinesin light chain 3. ).
Length = 335
Score = 32.7 bits (71), Expect = 2.0
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 13/109 (11%)
Query: 166 KAQEASTMERQLIRMQEQANLGDTHNLDLT-----FAVLCNLADQY-ALNEMYTEALNTY 219
K +EA + ++ + ++E+ LG H D+ A+LC +Y A+ Y AL Y
Sbjct: 223 KYKEAEPLCQRALEIREKV-LGTNHP-DVAKQLNNLALLCQNQGKYEAVERYYQRALAIY 280
Query: 220 --QLLTRNKLFPHANRLKVNMGNIYFKMGEHPKALKLYRMALDQTPTAE 266
QL N P+ R K N+ + Y K G++ +A LY+ L + E
Sbjct: 281 EGQLGPDN---PNVARTKNNLASCYLKQGKYAEAETLYKEILTRAHVQE 326
>AJ249601-1|CAB63467.1| 559|Homo sapiens IkappaBR protein.
Length = 559
Score = 32.7 bits (71), Expect = 2.0
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 191 NLDLTFAVLCNLADQYALNEMYTEALNTYQLLTRNKLFPHANRLKVNMGNIYFKMGEHPK 250
NL LTF L A N+ + +++ L +N L+ R + N+G I+++ G+H +
Sbjct: 8 NLGLTFESLQQTA---LCNDYFRKSIF---LAEQNHLYEDLFRARYNLGTIHWRAGQHSQ 61
Query: 251 ALKLYRMALDQTPTAEKDLSDAE 273
A++ A + T K ++E
Sbjct: 62 AMRCLEGARECAHTMRKRFMESE 84
>AF042169-1|AAB97370.1| 786|Homo sapiens putative ATP-dependent
mitochondrial RNA helicase protein.
Length = 786
Score = 32.7 bits (71), Expect = 2.0
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Query: 34 FNEVAPALDTRNLREDE--TFQETLRTAGIGRKLPSRTGTGMVRLGTVSMRDVGSRSGTS 91
++ + P+++ + RE E T + L+ AG + SR G V T++ D+
Sbjct: 441 YSLIKPSINEKGERELEPITTSQALQIAGRAGRFSSRFKEGEVT--TMNHEDLSLLKEIL 498
Query: 92 ARPVTALRAAGYTSASRDRPMPTQHLEDS 120
RPV +RAAG + M HL D+
Sbjct: 499 KRPVDPIRAAGLHPTAEQIEMFAYHLPDA 527
>AB018262-1|BAA34439.2| 624|Homo sapiens KIAA0719 protein protein.
Length = 624
Score = 32.7 bits (71), Expect = 2.0
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 237 NMGNIYFKMGEHPKALKLYRMALDQTPTAEK-DLSDAEGGKAA 278
N GN YFK G++ +A++ Y A+ PT + DLS +AA
Sbjct: 135 NKGNKYFKAGKYEQAIQCYTEAISLCPTEKNVDLSTFYQNRAA 177
>BC014109-1|AAH14109.1| 670|Homo sapiens leucine rich repeat
containing 45 protein.
Length = 670
Score = 31.9 bits (69), Expect = 3.4
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 115 QHLEDSVEDRVKQMEARIMALVEESCLLSARPDPDDDSTTRKEHDLGQALAKA-QEASTM 173
Q LEDS R+K++E L E + R + + E +L + A A E
Sbjct: 424 QSLEDSESLRIKEVEHMTRHLEESEKAMQERVQRLEAARLSLEEELSRVKAAALSERGQA 483
Query: 174 ERQLIRMQEQANLGDTHNL 192
E +LI+ + QA L + L
Sbjct: 484 EEELIKAKSQARLEEQQRL 502
>L04733-1|AAA16576.1| 569|Homo sapiens kinesin light chain protein.
Length = 569
Score = 31.5 bits (68), Expect = 4.6
Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 9/122 (7%)
Query: 166 KAQEASTMERQLIRMQEQANLGDTHNLDLT-----FAVLCNLADQYALNEMYTE-ALNTY 219
K +EA + ++ + ++E+ LG H D+ A+LC +Y E Y + AL Y
Sbjct: 308 KYKEAEPLCKRALEIREKV-LGKDHP-DVAKQLNNLALLCQNQGKYEEVEYYYQRALEIY 365
Query: 220 QLLTRNKLFPHANRLKVNMGNIYFKMGEHPKALKLYRMALDQTPTAEKDLSDAEGGKAAF 279
Q P+ + K N+ + Y K G+ +A LY+ L + E D E
Sbjct: 366 QTKLGPD-DPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAHEREFGSVDDENKPIWM 424
Query: 280 HA 281
HA
Sbjct: 425 HA 426
>BC008881-1|AAH08881.1| 560|Homo sapiens kinesin light chain 1
protein.
Length = 560
Score = 31.5 bits (68), Expect = 4.6
Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 9/122 (7%)
Query: 166 KAQEASTMERQLIRMQEQANLGDTHNLDLT-----FAVLCNLADQYALNEMYTE-ALNTY 219
K +EA + ++ + ++E+ LG H D+ A+LC +Y E Y + AL Y
Sbjct: 312 KYKEAEPLCKRALEIREKV-LGKDHP-DVAKQLNNLALLCQNQGKYEEVEYYYQRALEIY 369
Query: 220 QLLTRNKLFPHANRLKVNMGNIYFKMGEHPKALKLYRMALDQTPTAEKDLSDAEGGKAAF 279
Q P+ + K N+ + Y K G+ +A LY+ L + E D E
Sbjct: 370 QTKLGPD-DPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAHEREFGSVDDENKPIWM 428
Query: 280 HA 281
HA
Sbjct: 429 HA 430
>AY180164-1|AAO62549.1| 556|Homo sapiens kinesin light chain 1C
protein.
Length = 556
Score = 31.5 bits (68), Expect = 4.6
Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 9/122 (7%)
Query: 166 KAQEASTMERQLIRMQEQANLGDTHNLDLT-----FAVLCNLADQYALNEMYTE-ALNTY 219
K +EA + ++ + ++E+ LG H D+ A+LC +Y E Y + AL Y
Sbjct: 308 KYKEAEPLCKRALEIREKV-LGKDHP-DVAKQLNNLALLCQNQGKYEEVEYYYQRALEIY 365
Query: 220 QLLTRNKLFPHANRLKVNMGNIYFKMGEHPKALKLYRMALDQTPTAEKDLSDAEGGKAAF 279
Q P+ + K N+ + Y K G+ +A LY+ L + E D E
Sbjct: 366 QTKLGPD-DPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAHEREFGSVDDENKPIWM 424
Query: 280 HA 281
HA
Sbjct: 425 HA 426
>AF267530-1|AAF72543.1| 569|Homo sapiens kinesin light-chain
protein protein.
Length = 569
Score = 31.5 bits (68), Expect = 4.6
Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 9/122 (7%)
Query: 166 KAQEASTMERQLIRMQEQANLGDTHNLDLT-----FAVLCNLADQYALNEMYTE-ALNTY 219
K +EA + ++ + ++E+ LG H D+ A+LC +Y E Y + AL Y
Sbjct: 308 KYKEAEPLCKRALEIREKV-LGKDHP-DVAKQLNNLALLCQNQGKYEEVEYYYQRALEIY 365
Query: 220 QLLTRNKLFPHANRLKVNMGNIYFKMGEHPKALKLYRMALDQTPTAEKDLSDAEGGKAAF 279
Q P+ + K N+ + Y K G+ +A LY+ L + E D E
Sbjct: 366 QTKLGPD-DPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAHEREFGSVDDENKPIWM 424
Query: 280 HA 281
HA
Sbjct: 425 HA 426
>AB209765-1|BAD93002.1| 397|Homo sapiens methyl-CpG binding domain
protein 1 isoform PCM1 variant protein.
Length = 397
Score = 31.5 bits (68), Expect = 4.6
Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 3/95 (3%)
Query: 39 PALDTRNLREDETFQETLRTAGIGRKLPSRTGTGMV--RLGTVSMRDVGSRSGTSARPVT 96
P L TR + D T T + AG G LP GT +V R G S V S +
Sbjct: 267 PTLATRTAQPDHTQAPTKQEAGGGFVLPP-PGTDLVFLREGASSPVQVPGPVAASTEALL 325
Query: 97 ALRAAGYTSASRDRPMPTQHLEDSVEDRVKQMEAR 131
G S ++ P P + E++ +D ++ R
Sbjct: 326 QAVDPGLPSVKQEPPDPEEDKEENKDDSASKIGPR 360
>EF488685-1|ABP02056.1| 536|Homo sapiens methyl-CpG binding domain
protein 1 variant 8 protein.
Length = 536
Score = 31.1 bits (67), Expect = 6.0
Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 39 PALDTRNLREDETFQETLRTAGIGRKLPSRTGTGMV--RLGTVSMRDVGSRSGTSARPVT 96
P L TR + D T T + AG G LP GT +V R G S V S +
Sbjct: 400 PTLATRTAQPDHTQAPTKQEAGGGFVLPP-PGTDLVFLREGASSPVQVPGPVAASTEALL 458
Query: 97 ALRAAGYTSASRDRPMPTQHLEDSVEDRVKQM 128
G S ++ P P + E++ +D ++
Sbjct: 459 QAVDPGLPSVKQEPPDPEEDKEENKDDSASKL 490
>AJ564845-1|CAD92308.1| 550|Homo sapiens methyl-CpG binding domain
protein 1, splice form 6 protein.
Length = 550
Score = 31.1 bits (67), Expect = 6.0
Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 39 PALDTRNLREDETFQETLRTAGIGRKLPSRTGTGMV--RLGTVSMRDVGSRSGTSARPVT 96
P L TR + D T T + AG G LP GT +V R G S V S +
Sbjct: 423 PTLATRTAQPDHTQAPTKQEAGGGFVLPP-PGTDLVFLREGASSPVQVPGPVAASTEALL 481
Query: 97 ALRAAGYTSASRDRPMPTQHLEDSVEDRVKQM 128
G S ++ P P + E++ +D ++
Sbjct: 482 QAVDPGLPSVKQEPPDPEEDKEENKDDSASKL 513
>AF078833-1|AAD51445.1| 503|Homo sapiens methyl-CpG binding protein
splice variant 4 protein.
Length = 503
Score = 31.1 bits (67), Expect = 6.0
Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 39 PALDTRNLREDETFQETLRTAGIGRKLPSRTGTGMV--RLGTVSMRDVGSRSGTSARPVT 96
P L TR + D T T + AG G LP GT +V R G S V S +
Sbjct: 367 PTLATRTAQPDHTQAPTKQEAGGGFVLPP-PGTDLVFLREGASSPVQVPGPVAASTEALL 425
Query: 97 ALRAAGYTSASRDRPMPTQHLEDSVEDRVKQM 128
G S ++ P P + E++ +D ++
Sbjct: 426 QAVDPGLPSVKQEPPDPEEDKEENKDDSASKL 457
>AF078831-1|AAD51443.1| 586|Homo sapiens methyl-CpG binding protein
splice variant 2 protein.
Length = 586
Score = 31.1 bits (67), Expect = 6.0
Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 39 PALDTRNLREDETFQETLRTAGIGRKLPSRTGTGMV--RLGTVSMRDVGSRSGTSARPVT 96
P L TR + D T T + AG G LP GT +V R G S V S +
Sbjct: 400 PTLATRTAQPDHTQAPTKQEAGGGFVLPP-PGTDLVFLREGASSPVQVPGPVAASTEALL 458
Query: 97 ALRAAGYTSASRDRPMPTQHLEDSVEDRVKQM 128
G S ++ P P + E++ +D ++
Sbjct: 459 QAVDPGLPSVKQEPPDPEEDKEENKDDSASKL 490
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.314 0.130 0.367
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,878,362
Number of Sequences: 224733
Number of extensions: 1736894
Number of successful extensions: 3589
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 3556
Number of HSP's gapped (non-prelim): 39
length of query: 349
length of database: 73,234,838
effective HSP length: 91
effective length of query: 258
effective length of database: 52,784,135
effective search space: 13618306830
effective search space used: 13618306830
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 66 (30.7 bits)
- SilkBase 1999-2023 -