Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000907-TA|BGIBMGA000907-PA|IPR013026|Tetratricopeptide
region, IPR013105|Tetratricopeptide TPR_2
(349 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g15420.1 68415.m01764 myosin heavy chain-related 34 0.16
At3g04240.1 68416.m00448 O-linked N-acetyl glucosamine transfera... 33 0.21
At3g48150.1 68416.m05251 cell division cycle family protein / CD... 31 0.87
At1g20960.1 68414.m02624 U5 small nuclear ribonucleoprotein heli... 31 0.87
At1g63660.2 68414.m07204 GMP synthase [glutamine-hydrolyzing], p... 30 2.0
At1g63660.1 68414.m07203 GMP synthase [glutamine-hydrolyzing], p... 30 2.0
At1g62740.1 68414.m07081 stress-inducible protein, putative simi... 30 2.0
At1g23060.2 68414.m02882 expressed protein Location of EST gb|T2... 30 2.0
At1g23060.1 68414.m02883 expressed protein Location of EST gb|T2... 30 2.0
At5g61140.1 68418.m07670 DEAD box RNA helicase, putative similar... 30 2.6
At1g15200.1 68414.m01817 protein-protein interaction regulator f... 30 2.6
At2g28450.1 68415.m03456 zinc finger (CCCH-type) family protein ... 29 3.5
At5g15430.1 68418.m01806 calmodulin-binding protein-related has ... 29 4.6
At4g33200.1 68417.m04727 myosin, putative similar to myosin (GI:... 29 4.6
At3g16010.1 68416.m02025 pentatricopeptide (PPR) repeat-containi... 29 4.6
At2g36390.1 68415.m04466 1,4-alpha-glucan branching enzyme / sta... 29 4.6
At1g78430.1 68414.m09139 tropomyosin-related similar to Tropomyo... 29 4.6
At1g12270.1 68414.m01419 stress-inducible protein, putative simi... 29 4.6
At1g04600.1 68414.m00454 myosin, putative similar to myosin (GI:... 29 4.6
At3g60620.1 68416.m06783 phosphatidate cytidylyltransferase fami... 29 6.1
At2g20000.1 68415.m02338 cell division cycle family protein / CD... 29 6.1
At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family pro... 29 6.1
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 29 6.1
At4g30480.2 68417.m04328 tetratricopeptide repeat (TPR)-containi... 28 8.1
At4g30480.1 68417.m04327 tetratricopeptide repeat (TPR)-containi... 28 8.1
At3g29130.1 68416.m03647 expressed protein ; expression supporte... 28 8.1
>At2g15420.1 68415.m01764 myosin heavy chain-related
Length = 957
Score = 33.9 bits (74), Expect = 0.16
Identities = 31/93 (33%), Positives = 41/93 (44%), Gaps = 13/93 (13%)
Query: 27 DDELYSGFN----EVAPALDTRNLRED---ETFQETLRTAGIGRKLPSRTGTGMVRLGTV 79
DD + GFN EV+ D N+ ED + E G+GR + +V V
Sbjct: 280 DDRDFGGFNDFGEEVSYVYDCENVDEDYISDPEGELGENGGLGRLMMENGFDNLV----V 335
Query: 80 SMRDVGSRSGTSARPVTAL--RAAGYTSASRDR 110
S RD G+R RPV+ + R G SA R R
Sbjct: 336 SGRDTGARGAVGTRPVSRIEERRTGDCSAVRGR 368
>At3g04240.1 68416.m00448 O-linked N-acetyl glucosamine transferase,
putative similar to O-GlcNAc transferase, Homo sapiens
[SP|O15294], Rattus norvegicus [SP|P56558]; contains
Pfam profile PF00515: TPR Domain; identical to cDNA
GI:18139886
Length = 977
Score = 33.5 bits (73), Expect = 0.21
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 201 NLADQYALNEMYTEALNTYQLLTRNKLFPHANRLKVNMGNIYFKMGEHPKALKLYRMALD 260
NLA Y Y++A++ Y + R + P A VN GN Y ++G +A++ Y A++
Sbjct: 398 NLAIIYKQQGNYSDAISCYNEVLR--IDPLAADALVNRGNTYKEIGRVTEAIQDYMHAIN 455
Query: 261 QTPT-AEKDLSDAEGGKAAFH 280
PT AE + A K + H
Sbjct: 456 FRPTMAEAHANLASAYKDSGH 476
Score = 31.9 bits (69), Expect = 0.65
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 195 TFAVL-CNLADQYALNEMYTEALNTYQLLTRNK-LFPHANRLKVNMGNIYFKMGEHPKAL 252
TFA+ NLA + + AL Y+ + K FP A +N+GN+Y +G +A+
Sbjct: 221 TFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPAFPDAY---LNLGNVYKALGRPTEAI 277
Query: 253 KLYRMALDQTPTA 265
Y+ AL P +
Sbjct: 278 MCYQHALQMRPNS 290
>At3g48150.1 68416.m05251 cell division cycle family protein / CDC
family protein similar to cell division cycle protein 23
[Homo sapiens] GI:3283051, anaphase-promoting complex
subunit 8 [Homo sapiens] GI:6180017; contains Pfam
profile PF00515: TPR Domain
Length = 579
Score = 31.5 bits (68), Expect = 0.87
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 200 CNLADQYALNEMYTEALNTYQ-LLTRNKLFPHANRLKVNMGNIYFKMGEHPKALKLYRMA 258
C + + Y+L + +A+ ++ L NK + A L MG+ Y +M P A+ YR A
Sbjct: 343 CIIGNYYSLKGQHEKAVMYFRRALKLNKKYLSAWTL---MGHEYVEMKNTPAAIDAYRRA 399
Query: 259 LDQTPT 264
+D PT
Sbjct: 400 VDINPT 405
>At1g20960.1 68414.m02624 U5 small nuclear ribonucleoprotein
helicase, putative similar to SP|O75643 U5 small nuclear
ribonucleoprotein 200 kDa helicase {Homo sapiens};
contains Pfam profiles PF00270: DEAD/DEAH box helicase,
PF00271: Helicase conserved C-terminal domain, PF02889:
Sec63 domain
Length = 2171
Score = 31.5 bits (68), Expect = 0.87
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 22 IIVDEDDELYSGFNEVAPALDTRNLREDETFQETLRTAGIGRKLPS 67
+I+DE L+ V ++ R LR+ ET +E +R G+ LP+
Sbjct: 636 LIIDEIHLLHDNRGPVLESIVARTLRQIETTKENIRLVGLSATLPN 681
>At1g63660.2 68414.m07204 GMP synthase [glutamine-hydrolyzing],
putative / glutamine amidotransferase, putative similar
to SP|P38625 GMP synthase [glutamine-hydrolyzing] (EC
6.3.5.2) (Glutamine amidotransferase) (GMP synthetase)
{Saccharomyces cerevisiae}; contains Pfam profile
PF00117: glutamine amidotransferase class-I
Length = 434
Score = 30.3 bits (65), Expect = 2.0
Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Query: 117 LEDSVEDRVKQMEARIMALVEESCLLSARPDPDDDSTTRKEHDLGQALAKAQEASTMERQ 176
+ED +E+ +K + + + C LS D +T + +A+ ++
Sbjct: 209 MEDLMEEEIKVINKTVASDEHVICALSGGVDSTVAATL-----VHKAIGDRLHCIFVDNG 263
Query: 177 LIRMQEQANLGDTHNLDLTFAVLCNLADQYALNEM 211
L+R +EQ + DT DL V C A + L+E+
Sbjct: 264 LLRYKEQERVMDTFERDLHLPVTCVDASERFLSEL 298
>At1g63660.1 68414.m07203 GMP synthase [glutamine-hydrolyzing],
putative / glutamine amidotransferase, putative similar
to SP|P38625 GMP synthase [glutamine-hydrolyzing] (EC
6.3.5.2) (Glutamine amidotransferase) (GMP synthetase)
{Saccharomyces cerevisiae}; contains Pfam profile
PF00117: glutamine amidotransferase class-I
Length = 534
Score = 30.3 bits (65), Expect = 2.0
Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Query: 117 LEDSVEDRVKQMEARIMALVEESCLLSARPDPDDDSTTRKEHDLGQALAKAQEASTMERQ 176
+ED +E+ +K + + + C LS D +T + +A+ ++
Sbjct: 209 MEDLMEEEIKVINKTVASDEHVICALSGGVDSTVAATL-----VHKAIGDRLHCIFVDNG 263
Query: 177 LIRMQEQANLGDTHNLDLTFAVLCNLADQYALNEM 211
L+R +EQ + DT DL V C A + L+E+
Sbjct: 264 LLRYKEQERVMDTFERDLHLPVTCVDASERFLSEL 298
>At1g62740.1 68414.m07081 stress-inducible protein, putative similar
to sti (stress inducible protein) [Glycine max]
GI:872116; contains Pfam profile PF00515 TPR Domain
Length = 571
Score = 30.3 bits (65), Expect = 2.0
Identities = 38/165 (23%), Positives = 67/165 (40%), Gaps = 16/165 (9%)
Query: 157 EHDLGQALAKAQEASTMERQLIRMQE-QANLGDTHNLDLTFAVLCNLADQYALNEMYTEA 215
EH + L + EA +++L + + N+GD + + + Y +A
Sbjct: 351 EHRNPETLKRLNEAERAKKELEQQEYYDPNIGDEER---------EKGNDFFKEQKYPDA 401
Query: 216 LNTY-QLLTRNKLFPHANRLKVNMGNIYFKMGEHPKALKLYRMALDQTPTAEKDLSDAEG 274
+ Y + + RN P A N Y K+G P+ LK ++ PT K S +G
Sbjct: 402 VRHYTEAIKRNPKDPRAYS---NRAACYTKLGAMPEGLKDAEKCIELDPTFLKGYS-RKG 457
Query: 275 GKAAFHAMLDVEPPTYHQDIPID-DEKDTYECVVRDVSRGDKLSR 318
F D TY + + D + ++ + V R V + +K +R
Sbjct: 458 AVQFFMKEYDNAMETYQKGLEHDPNNQELLDGVKRCVQQINKANR 502
>At1g23060.2 68414.m02882 expressed protein Location of EST
gb|T22158 and gb|AA395675
Length = 306
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 106 ASRDRPMPTQHLEDSVEDRV-KQMEARIMALVEESCLLSARPDPDDDSTTRKEHDLGQAL 164
A+R++ T +R K+ E ++ A+V ++ L ARP P + GQA
Sbjct: 174 ATREKKTSTNGFSLRSNERAEKKKEEKVEAVVRKALNLKARPLPKSTQARPQHTSTGQAK 233
Query: 165 AKAQ 168
AKA+
Sbjct: 234 AKAK 237
>At1g23060.1 68414.m02883 expressed protein Location of EST
gb|T22158 and gb|AA395675
Length = 367
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 106 ASRDRPMPTQHLEDSVEDRV-KQMEARIMALVEESCLLSARPDPDDDSTTRKEHDLGQAL 164
A+R++ T +R K+ E ++ A+V ++ L ARP P + GQA
Sbjct: 235 ATREKKTSTNGFSLRSNERAEKKKEEKVEAVVRKALNLKARPLPKSTQARPQHTSTGQAK 294
Query: 165 AKAQ 168
AKA+
Sbjct: 295 AKAK 298
>At5g61140.1 68418.m07670 DEAD box RNA helicase, putative similar to
ASC-1 complex subunit P200 [Homo sapiens] GI:12061185;
contains Pfam profiles PF00270: DEAD/DEAH box helicase,
PF00271: Helicase conserved C-terminal domain, PF02889:
Sec63 domain
Length = 2146
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/46 (36%), Positives = 23/46 (50%)
Query: 22 IIVDEDDELYSGFNEVAPALDTRNLREDETFQETLRTAGIGRKLPS 67
+I+DE L V AL R LR+ E+ Q +R G+ LPS
Sbjct: 638 LIIDEVHLLNDDRGAVIEALVARTLRQVESTQTMIRIVGLSATLPS 683
>At1g15200.1 68414.m01817 protein-protein interaction regulator
family protein contains Pfam PF04696: pinin/SDK/memA/
protein conserved region
Length = 423
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 163 ALAKAQEASTMERQLIRMQEQANLGDTHNLDLTF-AVLCNLADQYALNEMYTE 214
AL +A+E + E + +R+QE+ NL + DLT A + A+Q L ++ +
Sbjct: 196 ALQRAEEKAREESERLRLQERENLTEKRRRDLTLRARVAAKAEQKKLELLFLQ 248
>At2g28450.1 68415.m03456 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 809
Score = 29.5 bits (63), Expect = 3.5
Identities = 32/141 (22%), Positives = 62/141 (43%), Gaps = 13/141 (9%)
Query: 122 EDRVKQMEARIMALVEESCLLSARPDPDDDSTTRKEHDLGQALAKAQEAS--TMERQLIR 179
ED + ++ A +M +V+ CL + D+ + +L +A A+ AS T+ ++
Sbjct: 422 EDAITRI-AEVMLMVQV-CLTGS----DEAEVATEFEELAKAFAEGARASSPTLPLTVLV 475
Query: 180 MQEQANLGDTHNLDLTFAVLCNLADQYALNEMYTEALNTYQLLTRNKLFPHANRLKVNMG 239
+Q + + + D VL +++ T+ T +LT ++ H N L+ ++
Sbjct: 476 VQNHSGISNVAPPDAPLQVLA-----IPISDNGTDQEQTTNVLTEARIHDHINNLRFSIS 530
Query: 240 NIYFKMGEHPKALKLYRMALD 260
F A KLY +A D
Sbjct: 531 PTAFFQVNTVTAEKLYSIAGD 551
>At5g15430.1 68418.m01806 calmodulin-binding protein-related has
weak similarity to calmodulin-binding proteins
Length = 478
Score = 29.1 bits (62), Expect = 4.6
Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 6/111 (5%)
Query: 47 REDETFQETLRTAGIGRKLPSRTGTGMVRLGTVSMRDV--GSRSGTSARPVTALRAAGYT 104
R E ++ R + K ++T +R TV + + GS++ + V ALR A +
Sbjct: 164 RAKEIVEQKRRVTALKLKAVAQTAEIALRRSTVKRKKMNGGSKAAEQKKAVMALRRASMS 223
Query: 105 SASRDRPMPTQHLEDSVEDRVKQMEARI----MALVEESCLLSARPDPDDD 151
S R + T+ +S+ +K+ + LVEE L + + D+
Sbjct: 224 SKGCSRCLKTKKESNSLSVPLKKTRKHVGDKCKDLVEEKTLYVIKMETVDE 274
>At4g33200.1 68417.m04727 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]
Length = 1522
Score = 29.1 bits (62), Expect = 4.6
Identities = 27/115 (23%), Positives = 50/115 (43%), Gaps = 5/115 (4%)
Query: 198 VLCNLADQYALNEMYTEALNTYQLLTRNKLFPH---ANRLKVNMGNIYFKMGEHPKALK- 253
VL NL +YALN++YT + + K PH + ++ MG + ++ H A+
Sbjct: 83 VLYNLQRRYALNDIYTYTGSILIAVNPFKKLPHLYNGHMMEQYMGAPFGELSPHVFAVSD 142
Query: 254 -LYRMALDQTPTAEKDLSDAEGGKAAFHAMLDVEPPTYHQDIPIDDEKDTYECVV 307
YR +D + + +S G L ++ T+ DD++ + V+
Sbjct: 143 VAYRAMIDDSRSQSILVSGESGAGKTETTKLIMQYLTFVGGRATDDDRSVEQQVL 197
>At3g16010.1 68416.m02025 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 642
Score = 29.1 bits (62), Expect = 4.6
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Query: 182 EQANLGDTHNLDLTFAVLCNLADQYALNEMYTEALNTYQLLTRNKLFPHANRLKVNMGNI 241
E N GD +T++ L + ++ N+ A+ + + N + P ++ + I
Sbjct: 222 EMCNEGDCFPDTITYSALISSYEKLGRND---SAIRLFDEMKDNCMQP-TEKIYTTLLGI 277
Query: 242 YFKMGEHPKALKLY 255
YFK+G+ KAL L+
Sbjct: 278 YFKVGKVEKALDLF 291
>At2g36390.1 68415.m04466 1,4-alpha-glucan branching enzyme / starch
branching enzyme class II (SBE2-1) nearly identical to
starch branching enzyme class II [Arabidopsis thaliana]
GI:619939
Length = 858
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 7 YSASRLGTDAKPRTAIIVDEDDELYSGFNEV 37
YS R+G + I++D D+ L+ GFN +
Sbjct: 772 YSDYRIGCSVPGKYKIVLDSDNSLFGGFNRL 802
>At1g78430.1 68414.m09139 tropomyosin-related similar to Tropomyosin
1 [Baker's yeast](SP:P17536) {Saccharomyces cerevisiae};
similar to enterophilin-2L (GI:12718845) [Cavia
porcellus]; similar to latent nuclear antigen
(GI:5669894) [Human herpesvirus 8]; similar to multiple
ligand-binding protein 1 (GI:1403575) [Streptococcus
sp.]
Length = 326
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/66 (25%), Positives = 33/66 (50%)
Query: 120 SVEDRVKQMEARIMALVEESCLLSARPDPDDDSTTRKEHDLGQALAKAQEASTMERQLIR 179
S ED++ ++AR+ L +E LS + D + + ++ A AK E ++ Q+
Sbjct: 156 SKEDQINVLKARLYDLEKERVSLSEENETLKDQLKKTDTEMSCAKAKEDEIASKVSQIGE 215
Query: 180 MQEQAN 185
E++N
Sbjct: 216 ELEESN 221
>At1g12270.1 68414.m01419 stress-inducible protein, putative similar
to sti (stress inducible protein) [Glycine max]
GI:872116; contains Pfam profile PF00515 TPR Domain
Length = 572
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 239 GNIYFKMGEHPKALKLYRMALDQTPTAEKDLSDAEGGKAAFHAM 282
GN +FK ++P+A+K Y A+ + P K S+ AM
Sbjct: 390 GNDFFKEQKYPEAIKHYTEAIKRNPNDHKAYSNRAASYTKLGAM 433
>At1g04600.1 68414.m00454 myosin, putative similar to myosin
(GI:499047) [Arabidopsis thaliana]
Length = 1730
Score = 29.1 bits (62), Expect = 4.6
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 198 VLCNLADQYALNEMYTEALNTYQLLTRNKLFPH---ANRLKVNMGNIYFKMGEHPKAL-- 252
VL NL +Y NE+YT N + K PH + +K G + ++ HP A+
Sbjct: 77 VLLNLKCRYNANEIYTYTGNILIAVNPFKRLPHLYGSETMKQYKGTAFGELSPHPFAVAD 136
Query: 253 KLYRMALDQ 261
YR +++
Sbjct: 137 SAYRKMINE 145
>At3g60620.1 68416.m06783 phosphatidate cytidylyltransferase family
protein contains Pfam profile: PF01148 phosphatidate
cytidylyltransferase
Length = 399
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/49 (26%), Positives = 27/49 (55%)
Query: 150 DDSTTRKEHDLGQALAKAQEASTMERQLIRMQEQANLGDTHNLDLTFAV 198
DD+ +++EH++ Q L +E S+++ Q + + Q T L + +V
Sbjct: 75 DDANSKEEHNIDQELQNVEEDSSLDDQKQKSRSQFKKRVTFGLGIGLSV 123
>At2g20000.1 68415.m02338 cell division cycle family protein / CDC
family protein low similarity to SP|P30260|CC27_HUMAN
Protein CDC27Hs (Cell division cycle protein 27 homolog)
Homo sapiens; contains Pfam profile PF00515: TPR Domain
Length = 744
Score = 28.7 bits (61), Expect = 6.1
Identities = 27/102 (26%), Positives = 41/102 (40%), Gaps = 6/102 (5%)
Query: 164 LAKAQEASTMERQLIRMQEQANLGDTHNLDLTFAVLCNLADQYALNEMYTEALNTYQLLT 223
L + A + + + EQA + D N L N+ E EAL + L
Sbjct: 626 LGTSLHALKRSEEALEIMEQAIVADRKN-PLPMYQKANIL---VCLERLDEALEVLEEL- 680
Query: 224 RNKLFPHANRLKVNMGNIYFKMGEHPKALKLYRMALDQTPTA 265
+ P + + MG IY + H KA+ + +ALD P A
Sbjct: 681 -KEYAPSESSVYALMGRIYKRRNMHDKAMLHFGLALDMKPPA 721
>At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 1102
Score = 28.7 bits (61), Expect = 6.1
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 10/111 (9%)
Query: 25 DEDDELYSGFNEVAPALDTRNLREDETFQETLRTAGIGRKLPSRTGTGMVRLGTVSMRDV 84
D+DDE +G +E + A L +D+ + +GR S + G + D
Sbjct: 658 DDDDESVAGESETSDAASWETLNDDDRGAPEIPEEDLGR---SSSIEGNSDADIYAENDS 714
Query: 85 GSRSGTSARPVTALR-----AAGYTSASRDRPMPTQHLEDSVEDRVKQMEA 130
G R+G A P+ A+ A+G S +R + + + + +VE+ KQ E+
Sbjct: 715 G-RNGALALPLAAIEFVTRLASGIFSRAR-KSVDSSSSDYTVENVYKQAES 763
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/58 (27%), Positives = 26/58 (44%)
Query: 118 EDSVEDRVKQMEARIMALVEESCLLSARPDPDDDSTTRKEHDLGQALAKAQEASTMER 175
+DSV D K + + + +VE + + T ++E DL + LA E ER
Sbjct: 261 DDSVADETKTSDTKNVEVVETGKSKKKKKNNKSGRTVQEEEDLDKLLAALGETPAAER 318
>At4g30480.2 68417.m04328 tetratricopeptide repeat (TPR)-containing
protein similar to SP|Q99614 Tetratricopeptide repeat
protein 1 {Homo sapiens}; contains Pfam profile PF00515:
TPR Domain
Length = 277
Score = 28.3 bits (60), Expect = 8.1
Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 9/122 (7%)
Query: 157 EHDLGQALAKAQEASTMERQLIRMQE-QANLGDTHNLDLTFAVLCNL---ADQYALNEMY 212
++D + + Q + E Q+ M E +A + D N + A ++ +N +Y
Sbjct: 62 KNDAVTSQEEPQHSEKKEEQIELMSEGEAIVDDGSNKEKALAEANEAKAEGNKLFVNGLY 121
Query: 213 TEALNTYQL-LTRNKLFPHANRLK----VNMGNIYFKMGEHPKALKLYRMALDQTPTAEK 267
EAL+ Y L + P + L+ +N G + K+G+ + +K AL+ PT K
Sbjct: 122 EEALSKYAFALELVQELPESIELRSICYLNRGVCFLKLGKCEETIKECTKALELNPTYNK 181
Query: 268 DL 269
L
Sbjct: 182 AL 183
>At4g30480.1 68417.m04327 tetratricopeptide repeat (TPR)-containing
protein similar to SP|Q99614 Tetratricopeptide repeat
protein 1 {Homo sapiens}; contains Pfam profile PF00515:
TPR Domain
Length = 208
Score = 28.3 bits (60), Expect = 8.1
Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 9/122 (7%)
Query: 157 EHDLGQALAKAQEASTMERQLIRMQE-QANLGDTHNLDLTFAVLCNL---ADQYALNEMY 212
++D + + Q + E Q+ M E +A + D N + A ++ +N +Y
Sbjct: 62 KNDAVTSQEEPQHSEKKEEQIELMSEGEAIVDDGSNKEKALAEANEAKAEGNKLFVNGLY 121
Query: 213 TEALNTYQL-LTRNKLFPHANRLK----VNMGNIYFKMGEHPKALKLYRMALDQTPTAEK 267
EAL+ Y L + P + L+ +N G + K+G+ + +K AL+ PT K
Sbjct: 122 EEALSKYAFALELVQELPESIELRSICYLNRGVCFLKLGKCEETIKECTKALELNPTYNK 181
Query: 268 DL 269
L
Sbjct: 182 AL 183
>At3g29130.1 68416.m03647 expressed protein ; expression supported
by MPSS
Length = 185
Score = 28.3 bits (60), Expect = 8.1
Identities = 19/97 (19%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
Query: 165 AKAQEASTMERQLIRMQEQANLGDTHNLDLTFAVLCNLADQYALNEMYTEALNTYQLLTR 224
A +QE S + L+++++ +L +L + + + D +L + Y+L
Sbjct: 49 AASQEVSNEFKTLVKVEDLNSLRHLQHLIVLTLITLDSTDVSSLYAVAVNGYGVYRLQDS 108
Query: 225 NKLFPHANRLKVN-MGNIYFKMGEHPKALKLYRMALD 260
N + H N N ++ + + LK + LD
Sbjct: 109 NAVLSHYNEFAENCFSDVSLEFARSTRLLKSMKADLD 145
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.314 0.130 0.367
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,524,699
Number of Sequences: 28952
Number of extensions: 299411
Number of successful extensions: 717
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 699
Number of HSP's gapped (non-prelim): 33
length of query: 349
length of database: 12,070,560
effective HSP length: 82
effective length of query: 267
effective length of database: 9,696,496
effective search space: 2588964432
effective search space used: 2588964432
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 60 (28.3 bits)
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