Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000906-TA|BGIBMGA000906-PA|undefined
(104 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces pom... 27 0.60
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 0.80
SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|ch... 27 0.80
SPBC3D6.07 |gpi3||pig-A|Schizosaccharomyces pombe|chr 2|||Manual 26 1.1
SPAC222.13c |||6-phosphofructo-2-kinase |Schizosaccharomyces pom... 26 1.4
SPBC146.07 |prp2|mis11|U2AF large subunit |Schizosaccharomyces p... 25 1.8
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 25 3.2
SPAC26F1.09 |gyp51||GTPase activating protein Gyp51 |Schizosacch... 25 3.2
SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|... 24 4.3
SPAC22H10.03c |kap114||karyopherin Kap14|Schizosaccharomyces pom... 24 4.3
SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|ch... 24 5.6
SPAC664.01c |swi6|SPAC824.10c|chromodomain protein Swi6|Schizosa... 23 7.4
SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces ... 23 9.8
SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange facto... 23 9.8
SPAC3C7.06c |pit1||serine/threonine protein kinase Pit1|Schizosa... 23 9.8
>SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 659
Score = 27.1 bits (57), Expect = 0.60
Identities = 13/49 (26%), Positives = 23/49 (46%)
Query: 41 GGVPEIARSLPMNMPKFPNDRAAQEQDYADDEEPHDIAASMKALARSVH 89
G + E++ + P NM + + Q Q HD+ +S A + S+H
Sbjct: 111 GALKEVSSNTPPNMTRAASQPPPQVQRLPASAPKHDLYSSANASSASLH 159
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 0.80
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 39 RGGGVPEIARSLPMNMPKFPNDRAAQEQDYADD 71
R G+ EIA + MPK P+D A + A D
Sbjct: 441 RAAGLREIAAASGSPMPKLPSDSALHRLNAASD 473
Score = 24.2 bits (50), Expect = 4.3
Identities = 14/52 (26%), Positives = 21/52 (40%)
Query: 37 RPRGGGVPEIARSLPMNMPKFPNDRAAQEQDYADDEEPHDIAASMKALARSV 88
+P P + N P P A E AD EP D +S +A++ +
Sbjct: 172 QPPSAAAPATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEI 223
>SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1822
Score = 26.6 bits (56), Expect = 0.80
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 28 SAGEGVQITRPRGGGVPEIARSL 50
S E Q++ RGG +PE +RS+
Sbjct: 1583 SENENTQLSHKRGGSLPETSRSI 1605
>SPBC3D6.07 |gpi3||pig-A|Schizosaccharomyces pombe|chr 2|||Manual
Length = 456
Score = 26.2 bits (55), Expect = 1.1
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 6/44 (13%)
Query: 27 ESAGEGVQITRPRGGGVPEIARSLPMNMPKFPNDRAAQEQDYAD 70
E+A G+ + + GGVPE+ LP +M +F +E D AD
Sbjct: 285 EAASCGLYVISTKVGGVPEV---LPSHMTRFAR---PEEDDLAD 322
>SPAC222.13c |||6-phosphofructo-2-kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 592
Score = 25.8 bits (54), Expect = 1.4
Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 5/78 (6%)
Query: 24 RTEE-SAGEGVQITRPRGGGVPEIARSLPMNMPKFPNDRAAQEQDYADDE--EPHDIAAS 80
RTEE + G G + T+P + ++ P P +E + DD + ++
Sbjct: 8 RTEEFTKGTGYEATKPNNDTDDDAKQNYPSKEPHMKLGDYTEETSFVDDSIFKREELTPD 67
Query: 81 MKALARSVHGDAFELPRP 98
+ A V + E+P+P
Sbjct: 68 RNSPANDV--EKMEVPKP 83
>SPBC146.07 |prp2|mis11|U2AF large subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 517
Score = 25.4 bits (53), Expect = 1.8
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 24 RTEESAGEGVQITRPRGGGVPEIARSLPMNMPKFPNDRAAQEQDYADDEEP 74
R E +G G+ PRG E R + F R ++E+ Y +DE P
Sbjct: 27 RRERGSG-GIGREDPRGHYGSERPRRRRRDESDFRRHRESRERSYREDERP 76
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 24.6 bits (51), Expect = 3.2
Identities = 12/53 (22%), Positives = 23/53 (43%), Gaps = 5/53 (9%)
Query: 42 GVPEIARSLPMNMPKFPND-----RAAQEQDYADDEEPHDIAASMKALARSVH 89
G+P +S+P+ M FP +E++ + P S + + S+H
Sbjct: 498 GIPPTTQSIPLKMAGFPGGVNSSLTDIKEEEAVSENAPQQEERSFEQIKTSIH 550
>SPAC26F1.09 |gyp51||GTPase activating protein Gyp51
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1031
Score = 24.6 bits (51), Expect = 3.2
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 58 PNDRAAQEQDYADDEE 73
PND QE+ Y+DD++
Sbjct: 210 PNDLRQQEESYSDDDD 225
>SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1184
Score = 24.2 bits (50), Expect = 4.3
Identities = 15/69 (21%), Positives = 28/69 (40%)
Query: 26 EESAGEGVQITRPRGGGVPEIARSLPMNMPKFPNDRAAQEQDYADDEEPHDIAASMKALA 85
+E A Q++R IA + P+ P F ++ + ++EEP + +
Sbjct: 752 KERAKYAKQMSRESAHADQAIANTGPVAPPYFEHETEPSHYEEEEEEEPEERREESSHFS 811
Query: 86 RSVHGDAFE 94
S + FE
Sbjct: 812 ESSGNNEFE 820
>SPAC22H10.03c |kap114||karyopherin Kap14|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 986
Score = 24.2 bits (50), Expect = 4.3
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 58 PNDRAAQEQDYADDEEPHDIAASMKALARS 87
PN R E D E+ HD AA + +A S
Sbjct: 18 PNSRIQAELGLRDLEKYHDFAAKLTDIASS 47
>SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 867
Score = 23.8 bits (49), Expect = 5.6
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 73 EPHDIAASMKALARSVHGDA 92
EPHD+ S L++ H +A
Sbjct: 173 EPHDVDTSKNGLSKKQHSEA 192
>SPAC664.01c |swi6|SPAC824.10c|chromodomain protein
Swi6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 23.4 bits (48), Expect = 7.4
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 41 GGVPEIARSLPMNMPKFPNDRAAQEQDYADDEEPHD 76
GG PE ++ PK P + + DE+ HD
Sbjct: 136 GGRPEPSKRKRTARPKKPEAKEPSPKSRKTDEDKHD 171
>SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1502
Score = 23.0 bits (47), Expect = 9.8
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 7 LSSYEPVSFVLQVVRLCRTEESA 29
LS +EP+ F R+C+ E A
Sbjct: 964 LSQFEPLIFKCTASRICKVREIA 986
>SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange factor
Sec74|Schizosaccharomyces pombe|chr 1|||Manual
Length = 928
Score = 23.0 bits (47), Expect = 9.8
Identities = 11/36 (30%), Positives = 14/36 (38%)
Query: 41 GGVPEIARSLPMNMPKFPNDRAAQEQDYADDEEPHD 76
G PE+ R P +P N Y+ E P D
Sbjct: 889 GKNPEVVRKSPAKLPNIANIMTVNGHRYSVVELPDD 924
>SPAC3C7.06c |pit1||serine/threonine protein kinase
Pit1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 650
Score = 23.0 bits (47), Expect = 9.8
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Query: 18 QVVRLCRTEESAGEGVQITRPRGGGVPE----IARSLPMNMPK 56
Q+ ++C S E Q T +GGG+ + +A L +++PK
Sbjct: 249 QLYKMCEILGSPDEQSQNTGDKGGGIWDRAELLANKLGISLPK 291
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.132 0.378
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 454,150
Number of Sequences: 5004
Number of extensions: 16418
Number of successful extensions: 40
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 26
Number of HSP's gapped (non-prelim): 17
length of query: 104
length of database: 2,362,478
effective HSP length: 63
effective length of query: 41
effective length of database: 2,047,226
effective search space: 83936266
effective search space used: 83936266
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 47 (23.0 bits)
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