Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000906-TA|BGIBMGA000906-PA|undefined
(104 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0254 - 21314861-21315805 29 0.91
02_04_0252 - 21305834-21306778 29 0.91
02_04_0250 - 21287782-21288726 29 0.91
02_04_0248 - 21278756-21279700 29 0.91
02_04_0246 - 21269730-21270674 29 0.91
05_07_0138 + 27962864-27963184,27963297-27963431,27963959-279640... 28 1.2
01_06_1156 + 34974727-34974833,34975110-34975217,34978124-34978706 27 2.1
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 27 3.7
02_04_0278 - 21507288-21507726,21507893-21507972,21508587-215088... 27 3.7
01_06_1431 + 37317248-37317907 27 3.7
02_01_0168 + 1162447-1162866,1162940-1163317,1163606-1163829,116... 26 4.9
12_02_0583 + 20810976-20812028,20812727-20812882,20813029-20813415 26 6.4
06_03_1000 - 26778993-26779478 26 6.4
03_06_0326 + 33150599-33150907,33151013-33151104,33151961-331520... 26 6.4
03_06_0073 + 31474832-31475284 26 6.4
02_05_0256 + 27201483-27202499,27203297-27203375,27204617-272049... 26 6.4
01_01_0871 + 6813091-6814212 26 6.4
12_02_0973 + 24959440-24959451,24959962-24962195,24962539-249626... 25 8.5
12_02_0063 + 13098519-13099585,13099759-13099906 25 8.5
12_02_0058 + 13015401-13016654 25 8.5
12_02_0046 + 12830974-12832386 25 8.5
02_02_0243 - 8226955-8227304,8227355-8228201,8228460-8229467 25 8.5
02_02_0011 + 6083431-6085541,6086659-6086779,6087188-6087247,608... 25 8.5
01_01_0749 - 5794140-5794346,5795445-5795558,5795856-5796008,579... 25 8.5
>02_04_0254 - 21314861-21315805
Length = 314
Score = 28.7 bits (61), Expect = 0.91
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 40 GGGV-PEIARSLPMNMPKFPNDRAAQEQDYADDEEPHDIAASMKAL 84
GGGV PE+ RSLP+ + AA +++ +D++ + A + L
Sbjct: 85 GGGVDPEVLRSLPVTVYSRSTAAAAAKEEEEEDDDGVECAVCLAEL 130
>02_04_0252 - 21305834-21306778
Length = 314
Score = 28.7 bits (61), Expect = 0.91
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 40 GGGV-PEIARSLPMNMPKFPNDRAAQEQDYADDEEPHDIAASMKAL 84
GGGV PE+ RSLP+ + AA +++ +D++ + A + L
Sbjct: 85 GGGVDPEVLRSLPVTVYSRSTAAAAAKEEEEEDDDGVECAVCLAEL 130
>02_04_0250 - 21287782-21288726
Length = 314
Score = 28.7 bits (61), Expect = 0.91
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 40 GGGV-PEIARSLPMNMPKFPNDRAAQEQDYADDEEPHDIAASMKAL 84
GGGV PE+ RSLP+ + AA +++ +D++ + A + L
Sbjct: 85 GGGVDPEVLRSLPVTVYSRSTAAAAAKEEEEEDDDGVECAVCLAEL 130
>02_04_0248 - 21278756-21279700
Length = 314
Score = 28.7 bits (61), Expect = 0.91
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 40 GGGV-PEIARSLPMNMPKFPNDRAAQEQDYADDEEPHDIAASMKAL 84
GGGV PE+ RSLP+ + AA +++ +D++ + A + L
Sbjct: 85 GGGVDPEVLRSLPVTVYSRSTAAAAAKEEEEEDDDGVECAVCLAEL 130
>02_04_0246 - 21269730-21270674
Length = 314
Score = 28.7 bits (61), Expect = 0.91
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 40 GGGV-PEIARSLPMNMPKFPNDRAAQEQDYADDEEPHDIAASMKAL 84
GGGV PE+ RSLP+ + AA +++ +D++ + A + L
Sbjct: 85 GGGVDPEVLRSLPVTVYSRSTAAAAAKEEEEEDDDGVECAVCLAEL 130
>05_07_0138 +
27962864-27963184,27963297-27963431,27963959-27964069,
27964622-27964903,27965246-27965445,27965595-27965826,
27965855-27965875
Length = 433
Score = 28.3 bits (60), Expect = 1.2
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 62 AAQEQDYADDEEPHDIAASMKALARSVHGDAFELPRPRF 100
A +E++Y D+EE + + A V GD PR F
Sbjct: 62 AQEEEEYDDEEEEELVVVGYVSGAHGVRGDVLVSPRTDF 100
>01_06_1156 + 34974727-34974833,34975110-34975217,34978124-34978706
Length = 265
Score = 27.5 bits (58), Expect = 2.1
Identities = 15/37 (40%), Positives = 18/37 (48%)
Query: 13 VSFVLQVVRLCRTEESAGEGVQITRPRGGGVPEIARS 49
VS +L V+R C ESAG P P +ARS
Sbjct: 179 VSSLLTVIRGCHIAESAGNNSAAALPVNRPPPAVARS 215
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 26.6 bits (56), Expect = 3.7
Identities = 9/20 (45%), Positives = 15/20 (75%)
Query: 60 DRAAQEQDYADDEEPHDIAA 79
D A+E+DY ++EE ++AA
Sbjct: 427 DATAEEEDYEEEEEDEEVAA 446
>02_04_0278 -
21507288-21507726,21507893-21507972,21508587-21508840,
21508988-21509180
Length = 321
Score = 26.6 bits (56), Expect = 3.7
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 36 TRPRGGGVPEIARSLPMNMPKFPNDRAAQEQDYADDEE 73
TRP GG S P +M + + +Q+ ADDE+
Sbjct: 80 TRPADGGAEAGRPSSPSSMQEASTRQQVADQEAADDED 117
>01_06_1431 + 37317248-37317907
Length = 219
Score = 26.6 bits (56), Expect = 3.7
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 10/59 (16%)
Query: 35 ITRPRGGGVPEIARSLPMNMPKFPNDRAA-------QEQDYADDEE---PHDIAASMKA 83
I RP P I +S P+N+P R + E D DDEE PH++ A +A
Sbjct: 123 IPRPAAALAPHIPQSAPVNVPVAQFRRLSVEALMDKAEDDDDDDEEMLPPHEMVARARA 181
>02_01_0168 +
1162447-1162866,1162940-1163317,1163606-1163829,
1163929-1163992,1164521-1164717,1164849-1165062
Length = 498
Score = 26.2 bits (55), Expect = 4.9
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 65 EQDYADDEEPHDIAASMKALARSVHGDAFELP 96
EQD D ++P D+AA LA G E P
Sbjct: 107 EQDDGDGDDPFDVAADHDLLAVVADGAGSEKP 138
>12_02_0583 + 20810976-20812028,20812727-20812882,20813029-20813415
Length = 531
Score = 25.8 bits (54), Expect = 6.4
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 67 DYADDEEPHDIAASMKALARSVHGDAFELPRPRFSTQ 103
D+ADD E +AA ++ R V GD F L P Q
Sbjct: 132 DHADDIESEHVAAWLRFAERHVTGD-FRLDVPTLPRQ 167
>06_03_1000 - 26778993-26779478
Length = 161
Score = 25.8 bits (54), Expect = 6.4
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 17 LQVVRLCRTEESAGEGVQITRPRGGGVPE 45
L+ +R+ +AG G RP GVPE
Sbjct: 14 LRPIRVTAAAAAAGSGAATARPDDAGVPE 42
>03_06_0326 +
33150599-33150907,33151013-33151104,33151961-33152057,
33152585-33152656,33152750-33152812,33152905-33153045,
33153603-33153698,33154120-33154404,33154692-33154851,
33154947-33155089,33155688-33155861,33156386-33156652,
33156737-33156856
Length = 672
Score = 25.8 bits (54), Expect = 6.4
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 71 DEEPHDIAASMKALARSVHGDAFELPRPRFSTQI 104
+E P D+ A + L S+ GD +L + ST++
Sbjct: 317 EEPPPDVLAEERGLHASIEGDVKDLLEGKTSTEL 350
>03_06_0073 + 31474832-31475284
Length = 150
Score = 25.8 bits (54), Expect = 6.4
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Query: 53 NMPKF---PNDRAAQEQDYADDEEPHDIAASMKALARSV 88
NMP P D Y DD+E D A LAR +
Sbjct: 69 NMPALIGCPGDEPRMLTPYVDDDEDEDDATESPTLARGI 107
>02_05_0256 +
27201483-27202499,27203297-27203375,27204617-27204946,
27205029-27205198
Length = 531
Score = 25.8 bits (54), Expect = 6.4
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 32 GVQITRPRGGGVPEIARSLPMNMPKFPNDRA--AQEQDYADDEEPHDIA 78
G +I+RP GG P + +L + K P+ A A E D+A ++ +A
Sbjct: 411 GFEISRPSGGPSPGVPVALILGGRKLPSCHAVVALEYDHASVQKERWLA 459
>01_01_0871 + 6813091-6814212
Length = 373
Score = 25.8 bits (54), Expect = 6.4
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Query: 44 PEIARSLPMNMPKFPNDRAAQEQDYADDEEPHDIAASMKALARS 87
PE+A +P P + A+ Y EE H AAS ++ RS
Sbjct: 211 PEVAERVPQ--PPGASKNASPATSYDSGEESHAAAASPTSVLRS 252
>12_02_0973 + 24959440-24959451,24959962-24962195,24962539-24962653,
24963146-24963943,24964140-24964422,24964500-24964951,
24965744-24965870,24965950-24966074,24966188-24966858,
24966976-24967093,24967177-24967293,24967564-24967658,
24968152-24968303,24968858-24968913,24969001-24969218,
24969842-24970239,24970345-24970628,24970730-24970836,
24970882-24970968,24971729-24971990,24972228-24972503,
24973197-24973254,24973437-24973756,24973889-24973999,
24974183-24974350,24974494-24974622,24974731-24974820,
24974934-24975040,24975133-24975281,24975584-24975666,
24975749-24975844,24975957-24976079,24976180-24976263,
24976371-24976511,24976652-24976951,24977386-24977453,
24977540-24977642,24979363-24979524,24979613-24981230,
24981270-24981661,24981689-24981991,24982078-24982161,
24982296-24982448,24982678-24982841,24982915-24983062,
24983209-24983331,24983409-24983496,24983686-24983867
Length = 4177
Score = 25.4 bits (53), Expect = 8.5
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 4 VIELSSYEPVSFVLQVVRLCRTEESAGEGVQITRPRGGG 42
V+ L+ + VSF ++V+ T+ AG + RP GGG
Sbjct: 2890 VLTLAEHLFVSFAVRVLHREATKAIAGVVSKAKRPAGGG 2928
>12_02_0063 + 13098519-13099585,13099759-13099906
Length = 404
Score = 25.4 bits (53), Expect = 8.5
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 72 EEPHDIAASMKALARSVHGDAF 93
+EP D+A +ARS +GD F
Sbjct: 51 DEPRDLAGKYAPVARSPNGDRF 72
>12_02_0058 + 13015401-13016654
Length = 417
Score = 25.4 bits (53), Expect = 8.5
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 72 EEPHDIAASMKALARSVHGDAF 93
+EP D+A +ARS +GD F
Sbjct: 53 DEPRDLAGKYAPVARSSNGDRF 74
>12_02_0046 + 12830974-12832386
Length = 470
Score = 25.4 bits (53), Expect = 8.5
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 73 EPHDIAASMKALARSVHGDAFEL 95
EP ++AA +ARS +GD F L
Sbjct: 52 EPRELAAQFAPVARSSNGDRFFL 74
>02_02_0243 - 8226955-8227304,8227355-8228201,8228460-8229467
Length = 734
Score = 25.4 bits (53), Expect = 8.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 25 TEESAGEGVQITRPRGGGVPEIARS 49
TEE AG G ++ RGGG +A +
Sbjct: 511 TEEQAGAGSRLLERRGGGGRHLAHA 535
>02_02_0011 +
6083431-6085541,6086659-6086779,6087188-6087247,
6087354-6088391,6089733-6089925,6090326-6090375,
6090470-6090744,6091114-6091180,6091189-6091278,
6091301-6091381,6091435-6091593
Length = 1414
Score = 25.4 bits (53), Expect = 8.5
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 4/38 (10%)
Query: 41 GGVPEIARSLPMNM----PKFPNDRAAQEQDYADDEEP 74
G P SLPM+ P FP R E+D DD P
Sbjct: 854 GSTPGPRPSLPMSSHGAPPGFPVQRHRHEEDVTDDVPP 891
>01_01_0749 -
5794140-5794346,5795445-5795558,5795856-5796008,
5796124-5796207,5796262-5796399,5796500-5796598
Length = 264
Score = 25.4 bits (53), Expect = 8.5
Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Query: 17 LQVVRLCRTEESAGEGVQITRPRGGGVPEIARSLPMNMPKFPNDRAAQEQDYADDEEPHD 76
LQV L R S G T GVP + R+ P+ + R ++Y+ DE D
Sbjct: 94 LQVPSLVRRYGST-TGATATATPAAGVPALHRASPLPLFVPRRRRVYSSEEYSSDEYSSD 152
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.132 0.378
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,250,305
Number of Sequences: 37544
Number of extensions: 132530
Number of successful extensions: 380
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 362
Number of HSP's gapped (non-prelim): 24
length of query: 104
length of database: 14,793,348
effective HSP length: 72
effective length of query: 32
effective length of database: 12,090,180
effective search space: 386885760
effective search space used: 386885760
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 53 (25.4 bits)
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