Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000906-TA|BGIBMGA000906-PA|undefined
(104 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_36217| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.23
SB_36094| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.31
SB_15911| Best HMM Match : Sec7 (HMM E-Value=0) 29 0.94
SB_58143| Best HMM Match : RCSD (HMM E-Value=5.9) 28 1.6
SB_52927| Best HMM Match : RCSD (HMM E-Value=5.9) 28 1.6
SB_49130| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.6
SB_56305| Best HMM Match : zf-C4 (HMM E-Value=0) 27 2.2
SB_38064| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.8
SB_35878| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.8
SB_13208| Best HMM Match : ThiS (HMM E-Value=1.6) 26 5.0
SB_54232| Best HMM Match : Pkinase (HMM E-Value=1.1e-39) 26 6.7
SB_23517| Best HMM Match : WD40 (HMM E-Value=0) 26 6.7
SB_15615| Best HMM Match : SAMP (HMM E-Value=0.06) 26 6.7
SB_50457| Best HMM Match : Amidase (HMM E-Value=2.6e-36) 25 8.8
SB_39219| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.8
SB_16794| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.8
SB_49107| Best HMM Match : Enterotoxin_HS (HMM E-Value=3.7) 25 8.8
SB_27380| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.8
>SB_36217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1356
Score = 30.7 bits (66), Expect = 0.23
Identities = 17/83 (20%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Query: 16 VLQVVRLCRTEESAGEGVQITRPRGGGVPEIARSLPMNMPKFPNDRAAQEQDYADDEEPH 75
+L+ R + + EG + + G P++ LP +P + + ++ + P
Sbjct: 1273 ILETQHQRRQQRATAEGGESSDEEEDGSPKLTIELPREIPSYDSHESSDSSSEEEATAPP 1332
Query: 76 DIAASMKALARSVHGDAFELPRP 98
S ++ A H + F LP P
Sbjct: 1333 PPRRSTRSTA-GKHSNRFNLPMP 1354
>SB_36094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 64
Score = 30.3 bits (65), Expect = 0.31
Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 27 ESAGEGVQITRPRGGGVPEIARSLPMNMPKFPNDRAAQEQDYADDEEPHDIAAS 80
E E VQ+ + R + +++ P N P P+D ++Q +D+++P + +S
Sbjct: 9 EQIAEIVQLIK-RENEIKGASKTTPPNQPPEPDDETMEQQPESDEQQPQEKQSS 61
>SB_15911| Best HMM Match : Sec7 (HMM E-Value=0)
Length = 1220
Score = 28.7 bits (61), Expect = 0.94
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 45 EIARSLPMNMPKFPNDRAAQEQDYADDEEPHDIAASMKALARSVH 89
E A+ N + P D ++Q ++ +D PH AAS++ + S H
Sbjct: 438 EQAKDATSNSAEHPEDPSSQSAEHPEDHSPHS-AASVENSSSSQH 481
>SB_58143| Best HMM Match : RCSD (HMM E-Value=5.9)
Length = 111
Score = 27.9 bits (59), Expect = 1.6
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Query: 25 TEESAGEGVQITRPRGGGVPEIARSLPMNM--PKFPNDRAAQEQDYADDEEP 74
TE+ E TR G PE+A S + F N++ + ADDE+P
Sbjct: 53 TEDGVVETTTETRQEADGAPELADSEKEKLIQEMFSNEKGVLDFFSADDEKP 104
>SB_52927| Best HMM Match : RCSD (HMM E-Value=5.9)
Length = 111
Score = 27.9 bits (59), Expect = 1.6
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Query: 25 TEESAGEGVQITRPRGGGVPEIARSLPMNM--PKFPNDRAAQEQDYADDEEP 74
TE+ E TR G PE+A S + F N++ + ADDE+P
Sbjct: 53 TEDGVVETTTETRQEADGAPELADSEKEKLIQEMFSNEKGVLDFFSADDEKP 104
>SB_49130| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 665
Score = 27.9 bits (59), Expect = 1.6
Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 1/83 (1%)
Query: 16 VLQVVRLCRTEESAGEGVQITRPRGGGVPEIARSLPMNMPKFPNDRAAQEQDYADDEEPH 75
+L+ R + + E + + G PE+ LP +P + + ++ + P
Sbjct: 582 ILETQHQQRQQRAMAEEGESSDEEEDGSPELTIELPREIPNYESHESSDSSSEEEATAPP 641
Query: 76 DIAASMKALARSVHGDAFELPRP 98
S ++ A H + F LP P
Sbjct: 642 PPRRSTRSTA-GKHSNRFNLPIP 663
>SB_56305| Best HMM Match : zf-C4 (HMM E-Value=0)
Length = 553
Score = 27.5 bits (58), Expect = 2.2
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Query: 24 RTEESAGEGVQITRPRGGGVPEIARSLPMNMPKFPNDRAAQEQDYADDEEP 74
R + S + T R G PE +S PM K + + E+DY D+ P
Sbjct: 105 REQYSKDRPISSTSDRSQGSPEAPKSQPM---KVIHQVSRDEKDYEQDDSP 152
>SB_38064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 26.6 bits (56), Expect = 3.8
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 32 GVQITRPRGGGVPEIARSLPMNMPKFPND 60
GV+ +G GV R L +PK+P D
Sbjct: 12 GVERVAQKGSGVESAVRELVQLVPKYPRD 40
>SB_35878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 149
Score = 26.6 bits (56), Expect = 3.8
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 1 MAKVIELSSYEPVSFVLQVVRLCRTEESAG 30
+ ++ +L+ +P FV++V LC TE+ AG
Sbjct: 96 LRRIPQLTHRKPRYFVVEVWTLCSTEKKAG 125
>SB_13208| Best HMM Match : ThiS (HMM E-Value=1.6)
Length = 1119
Score = 26.2 bits (55), Expect = 5.0
Identities = 13/39 (33%), Positives = 16/39 (41%)
Query: 51 PMNMPKFPNDRAAQEQDYADDEEPHDIAASMKALARSVH 89
PM P PN R + DE D+ S L R +H
Sbjct: 640 PMASPTSPNTRRKIPIQHRADENTLDVTGSPVVLVRPIH 678
>SB_54232| Best HMM Match : Pkinase (HMM E-Value=1.1e-39)
Length = 1123
Score = 25.8 bits (54), Expect = 6.7
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 53 NMPKFPNDRAAQEQDYA-DDEEPHDIAASMKALARSVHGDAFELPRPRFSTQI 104
++P ND+ + E+DYA E+ + + + LAR + + + R ++S QI
Sbjct: 492 DIPPNNNDKQSSEKDYAISTEKTLNEVNANQLLARDKYESSADRIRDKYSNQI 544
>SB_23517| Best HMM Match : WD40 (HMM E-Value=0)
Length = 860
Score = 25.8 bits (54), Expect = 6.7
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 58 PNDRAAQEQDYADDEEPHDIA 78
P D E+D DE+ HDIA
Sbjct: 267 PEDEGVDEEDDDKDEQKHDIA 287
>SB_15615| Best HMM Match : SAMP (HMM E-Value=0.06)
Length = 932
Score = 25.8 bits (54), Expect = 6.7
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 56 KFPNDRAAQEQDYADDEEPHDIAASMKALAR 86
KF D +E+DY D+++ D A M+ +R
Sbjct: 265 KFGQDDYDEEEDYEDEDDDDDEQAVMRRKSR 295
>SB_50457| Best HMM Match : Amidase (HMM E-Value=2.6e-36)
Length = 391
Score = 25.4 bits (53), Expect = 8.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 47 ARSLPMNMPKFPNDRAAQEQDYAD 70
A+ + +N+PKF NDR+ D D
Sbjct: 300 AKIIKLNLPKFNNDRSRNMADSFD 323
>SB_39219| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1951
Score = 25.4 bits (53), Expect = 8.8
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 70 DDEEPHDIAASMKALARSVHGD 91
DD +P+DI +K RS GD
Sbjct: 858 DDGDPNDIVDHVKTFVRSADGD 879
>SB_16794| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1407
Score = 25.4 bits (53), Expect = 8.8
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 59 NDRAAQEQDYADDEEPHDIAASMKALARSVHGDAFELPRP 98
N+ + + + A ++ ++ SMK L VHG EL P
Sbjct: 716 NEAKSNKHESARHQKKKEVLDSMKRLFPGVHGRLIELCEP 755
>SB_49107| Best HMM Match : Enterotoxin_HS (HMM E-Value=3.7)
Length = 254
Score = 25.4 bits (53), Expect = 8.8
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 45 EIARSLPMNMPKFPNDRAAQEQDYADDEEPHDIAASMK 82
EI+++ P K ++ ++ +Q Y +DEE D + K
Sbjct: 89 EISKAKPGPEGKPDSESSSDDQSYKEDEENEDFTTNKK 126
>SB_27380| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 509
Score = 25.4 bits (53), Expect = 8.8
Identities = 10/17 (58%), Positives = 13/17 (76%)
Query: 12 PVSFVLQVVRLCRTEES 28
P S VL++ R+C TEES
Sbjct: 365 PYSLVLRIRRICSTEES 381
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.316 0.132 0.378
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,445,429
Number of Sequences: 59808
Number of extensions: 123357
Number of successful extensions: 305
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 292
Number of HSP's gapped (non-prelim): 19
length of query: 104
length of database: 16,821,457
effective HSP length: 72
effective length of query: 32
effective length of database: 12,515,281
effective search space: 400488992
effective search space used: 400488992
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 53 (25.4 bits)
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