GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000906-TA|BGIBMGA000906-PA|undefined
         (104 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     24   0.99 
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             23   2.3  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   3.0  

>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 24.2 bits (50), Expect = 0.99
 Identities = 12/41 (29%), Positives = 16/41 (39%)

Query: 51  PMNMPKFPNDRAAQEQDYADDEEPHDIAASMKALARSVHGD 91
           PM  P +P +   Q   Y    EP     +    +R V GD
Sbjct: 175 PMYYPSYPTEANFQPHPYYPKYEPDAYITASTERSRGVTGD 215


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 4    VIELSSYEPVSFVLQVVRLCRTEESA 29
            V+E   YE V  V Q VR+ R++  A
Sbjct: 1179 VLERMQYEGVLDVFQTVRILRSQRPA 1204


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 31   EGVQITRPRGGGVPEIARSLPMNMPKFPN 59
            E ++ ++P GGG P    S   N  + PN
Sbjct: 1368 ELLESSQPAGGGTPRGRHSWASNSVEVPN 1396


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.316    0.132    0.378 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,490
Number of Sequences: 2123
Number of extensions: 3871
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 3
length of query: 104
length of database: 516,269
effective HSP length: 55
effective length of query: 49
effective length of database: 399,504
effective search space: 19575696
effective search space used: 19575696
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 42 (21.0 bits)