Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000906-TA|BGIBMGA000906-PA|undefined
(104 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-... 29 0.47
U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-... 29 0.47
U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical pr... 28 1.4
Z73910-4|CAA98136.1| 662|Caenorhabditis elegans Hypothetical pr... 26 4.4
Z30215-7|CAA82940.1| 322|Caenorhabditis elegans Hypothetical pr... 26 5.8
Z29560-13|CAA82665.1| 322|Caenorhabditis elegans Hypothetical p... 26 5.8
U00044-6|AAA50679.2| 670|Caenorhabditis elegans Bard homolog (t... 26 5.8
Z81098-2|CAB03182.1| 961|Caenorhabditis elegans Hypothetical pr... 25 7.7
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 25 7.7
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 25 7.7
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 25 7.7
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 25 7.7
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 25 7.7
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 25 7.7
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 25 7.7
U41543-6|AAB37023.1| 2018|Caenorhabditis elegans Hypothetical pr... 25 7.7
AF016439-4|AAV28339.1| 489|Caenorhabditis elegans Hypothetical ... 25 7.7
AF016439-3|AAB65899.2| 467|Caenorhabditis elegans Hypothetical ... 25 7.7
>U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform b protein.
Length = 1169
Score = 29.5 bits (63), Expect = 0.47
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 5 IELSSYEPVSFVLQVVRLCRTEESAGEGVQITRPR 39
IELS+ EPVSFV + +T++ G I RPR
Sbjct: 1021 IELSNVEPVSFVTPARQESQTQKPRIVGPPIRRPR 1055
>U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform a protein.
Length = 1876
Score = 29.5 bits (63), Expect = 0.47
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 5 IELSSYEPVSFVLQVVRLCRTEESAGEGVQITRPR 39
IELS+ EPVSFV + +T++ G I RPR
Sbjct: 1118 IELSNVEPVSFVTPARQESQTQKPRIVGPPIRRPR 1152
>U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical
protein C16A3.3 protein.
Length = 1743
Score = 27.9 bits (59), Expect = 1.4
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 26 EESAGEGVQITRPRGGGVPEIARSLPMNMPKFPNDRAAQEQ 66
++S GEGV + GG V ++AR+ +N +F D ++Q
Sbjct: 941 QKSVGEGVFVATRGGGDVDDVARTTLIN-KEFVGDEKKKKQ 980
>Z73910-4|CAA98136.1| 662|Caenorhabditis elegans Hypothetical
protein M117.4 protein.
Length = 662
Score = 26.2 bits (55), Expect = 4.4
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 51 PMNMPKFPNDRAAQEQDYADDEEP 74
P MPKFP+ + ++Q D EP
Sbjct: 52 PTLMPKFPSQKIIKQQKSPDKNEP 75
>Z30215-7|CAA82940.1| 322|Caenorhabditis elegans Hypothetical
protein K03H1.10 protein.
Length = 322
Score = 25.8 bits (54), Expect = 5.8
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Query: 47 ARSLPM--NMPKFPNDRAAQEQDY--ADDEEPHDIAASMKALARSVHGDAFELPRP 98
AR +P+ ++P N + Y AD E H I S + R +G+ LP P
Sbjct: 105 ARDVPLIFSLPHLANLIGTKGNSYGSADGEVVHQIGVSTMSAGRITNGNISNLPPP 160
>Z29560-13|CAA82665.1| 322|Caenorhabditis elegans Hypothetical
protein K03H1.10 protein.
Length = 322
Score = 25.8 bits (54), Expect = 5.8
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Query: 47 ARSLPM--NMPKFPNDRAAQEQDY--ADDEEPHDIAASMKALARSVHGDAFELPRP 98
AR +P+ ++P N + Y AD E H I S + R +G+ LP P
Sbjct: 105 ARDVPLIFSLPHLANLIGTKGNSYGSADGEVVHQIGVSTMSAGRITNGNISNLPPP 160
>U00044-6|AAA50679.2| 670|Caenorhabditis elegans Bard homolog
(tumor suppressorgene bard1) protein 1 protein.
Length = 670
Score = 25.8 bits (54), Expect = 5.8
Identities = 9/48 (18%), Positives = 26/48 (54%)
Query: 47 ARSLPMNMPKFPNDRAAQEQDYADDEEPHDIAASMKALARSVHGDAFE 94
++++P+ + +A++Q + EEP ++ ++ ++ S+ D E
Sbjct: 239 SKAIPLTKRQASMSASAKKQPKLEPEEPEEVPSTSRSRKNSIKSDKIE 286
>Z81098-2|CAB03182.1| 961|Caenorhabditis elegans Hypothetical
protein K07A12.2 protein.
Length = 961
Score = 25.4 bits (53), Expect = 7.7
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 28 SAGEGVQITRPRGGGVPEIARSLPMNMPKFPNDRAAQ 64
S+G+ R P R MN+PK PN+R +
Sbjct: 900 SSGQNAANESGRSSAAPSPIRPPLMNIPKTPNNRTME 936
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 25.4 bits (53), Expect = 7.7
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 29 AGEGVQITRPRGGGVPE-IARSLPMNMPKFPNDR 61
AGE +QI P GG P+ I N P F N+R
Sbjct: 4323 AGETIQIRIPYAGGNPKPIIDLFNGNSPIFENER 4356
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 25.4 bits (53), Expect = 7.7
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 29 AGEGVQITRPRGGGVPE-IARSLPMNMPKFPNDR 61
AGE +QI P GG P+ I N P F N+R
Sbjct: 4852 AGETIQIRIPYAGGNPKPIIDLFNGNSPIFENER 4885
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 25.4 bits (53), Expect = 7.7
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 29 AGEGVQITRPRGGGVPE-IARSLPMNMPKFPNDR 61
AGE +QI P GG P+ I N P F N+R
Sbjct: 4533 AGETIQIRIPYAGGNPKPIIDLFNGNSPIFENER 4566
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
ZK617.1c protein.
Length = 6629
Score = 25.4 bits (53), Expect = 7.7
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 29 AGEGVQITRPRGGGVPE-IARSLPMNMPKFPNDR 61
AGE +QI P GG P+ I N P F N+R
Sbjct: 4323 AGETIQIRIPYAGGNPKPIIDLFNGNSPIFENER 4356
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 25.4 bits (53), Expect = 7.7
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 29 AGEGVQITRPRGGGVPE-IARSLPMNMPKFPNDR 61
AGE +QI P GG P+ I N P F N+R
Sbjct: 4852 AGETIQIRIPYAGGNPKPIIDLFNGNSPIFENER 4885
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
ZK617.1a protein.
Length = 6839
Score = 25.4 bits (53), Expect = 7.7
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 29 AGEGVQITRPRGGGVPE-IARSLPMNMPKFPNDR 61
AGE +QI P GG P+ I N P F N+R
Sbjct: 4533 AGETIQIRIPYAGGNPKPIIDLFNGNSPIFENER 4566
>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
Length = 6048
Score = 25.4 bits (53), Expect = 7.7
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 29 AGEGVQITRPRGGGVPE-IARSLPMNMPKFPNDR 61
AGE +QI P GG P+ I N P F N+R
Sbjct: 3742 AGETIQIRIPYAGGNPKPIIDLFNGNSPIFENER 3775
>U41543-6|AAB37023.1| 2018|Caenorhabditis elegans Hypothetical
protein F46H5.4 protein.
Length = 2018
Score = 25.4 bits (53), Expect = 7.7
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Query: 38 PRGGGVPEIARSLPMNMPKFPNDRAAQEQDYADDEEPHDIAASMKALARSVHGDAF 93
P VPE ++P KF + QE D DE+ + I + M+ VH F
Sbjct: 486 PTSQEVPENIENMPSCNLKF-SSFIRQEGDKTSDEDIYRICSEMRRTNGKVHKKMF 540
>AF016439-4|AAV28339.1| 489|Caenorhabditis elegans Hypothetical
protein R02F11.3b protein.
Length = 489
Score = 25.4 bits (53), Expect = 7.7
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 45 EIARSLPMNMPKFPN-DRAAQEQDYADDEEPHD 76
+I+ +L N+ P +RA DY D PHD
Sbjct: 452 DISETLQSNIESLPEVERAFVHTDYDYDHHPHD 484
>AF016439-3|AAB65899.2| 467|Caenorhabditis elegans Hypothetical
protein R02F11.3a protein.
Length = 467
Score = 25.4 bits (53), Expect = 7.7
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 45 EIARSLPMNMPKFPN-DRAAQEQDYADDEEPHD 76
+I+ +L N+ P +RA DY D PHD
Sbjct: 430 DISETLQSNIESLPEVERAFVHTDYDYDHHPHD 462
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.316 0.132 0.378
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,522,203
Number of Sequences: 27539
Number of extensions: 96018
Number of successful extensions: 251
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 245
Number of HSP's gapped (non-prelim): 18
length of query: 104
length of database: 12,573,161
effective HSP length: 71
effective length of query: 33
effective length of database: 10,617,892
effective search space: 350390436
effective search space used: 350390436
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 53 (25.4 bits)
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