Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000905-TA|BGIBMGA000905-PA|IPR007087|Zinc finger,
C2H2-type, IPR007086|Zinc finger, C2H2-subtype
(277 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein ... 55 6e-08
At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein ... 54 8e-08
At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein ... 52 4e-07
At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein ... 50 1e-06
At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein ... 50 1e-06
At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein ... 46 2e-05
At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein ... 42 3e-04
At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein ... 42 3e-04
At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein ... 42 5e-04
At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein ... 41 0.001
At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein ... 41 0.001
At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein ... 41 0.001
At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein ... 40 0.001
At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein ... 40 0.002
At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein ... 40 0.002
At3g27970.1 68416.m03491 exonuclease family protein contains exo... 40 0.002
At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein ... 40 0.002
At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein ... 38 0.006
At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein ... 38 0.007
At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein ... 38 0.007
At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein ... 38 0.007
At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein ... 38 0.007
At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein ... 37 0.013
At5g40310.1 68418.m04890 exonuclease family protein contains exo... 37 0.017
At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein ... 37 0.017
At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein ... 36 0.030
At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein ... 36 0.039
At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein ... 36 0.039
At2g48100.2 68415.m06021 exonuclease family protein contains Pfa... 36 0.039
At2g48100.1 68415.m06020 exonuclease family protein contains Pfa... 36 0.039
At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3) ... 33 0.16
At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein ... 33 0.21
At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein ... 33 0.21
At5g54340.1 68418.m06767 zinc finger (C2H2 type) protein-related... 33 0.28
At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5) ... 32 0.49
At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zin... 32 0.49
At5g56200.1 68418.m07012 zinc finger (C2H2 type) family protein ... 31 0.64
At5g42640.1 68418.m05191 zinc finger (C2H2 type) family protein ... 31 0.64
At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2) ... 31 0.85
At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein ... 31 0.85
At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4) ... 31 1.1
At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein ... 31 1.1
At1g09920.1 68414.m01116 TRAF-type zinc finger-related contains ... 31 1.1
At3g46070.1 68416.m04985 zinc finger (C2H2 type) family protein ... 30 1.5
At1g13290.1 68414.m01543 zinc finger (C2H2 type) family protein ... 30 1.5
At5g27880.1 68418.m03344 zinc finger (C2H2 type) family protein ... 30 2.0
At5g25160.1 68418.m02983 zinc finger (C2H2 type) family protein ... 30 2.0
At5g10970.1 68418.m01275 zinc finger (C2H2 type) family protein ... 30 2.0
At4g23380.1 68417.m03371 hypothetical protein predicted proteins... 30 2.0
At4g17505.1 68417.m02619 expressed protein contains Pfam profil... 30 2.0
At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein ... 30 2.0
At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein ... 29 2.6
At4g25610.1 68417.m03689 zinc finger (C2H2 type) family protein ... 29 3.4
At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1... 29 4.5
At1g80220.1 68414.m09388 hypothetical protein 29 4.5
At1g24625.1 68414.m03099 zinc finger (C2H2 type) family protein ... 29 4.5
At5g59820.1 68418.m07500 zinc finger (C2H2 type) family protein ... 28 6.0
At5g09850.1 68418.m01139 transcription elongation factor-related... 28 6.0
At5g05120.1 68418.m00543 zinc finger (C2H2 type) family protein ... 28 6.0
At3g53820.1 68416.m05946 zinc finger (C2H2 type) family protein ... 28 6.0
At3g10470.1 68416.m01255 zinc finger (C2H2 type) family protein ... 28 6.0
At1g68360.1 68414.m07808 zinc finger protein-related similar to ... 28 6.0
At5g48890.1 68418.m06048 hypothetical protein 28 7.9
At5g03510.1 68418.m00307 zinc finger (C2H2 type) family protein ... 28 7.9
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 28 7.9
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 28 7.9
At1g02030.1 68414.m00123 zinc finger (C2H2 type) family protein ... 28 7.9
>At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domians PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1327
Score = 54.8 bits (126), Expect = 6e-08
Identities = 33/87 (37%), Positives = 41/87 (47%), Gaps = 13/87 (14%)
Query: 97 CSRSFGYKHVLQNHER---THTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSCPH- 152
C +F K LQ H+R TH G C K+F +L H R+H E+P+ C
Sbjct: 1222 CKMTFESKAKLQTHKRNRCTHEG--------CGKKFRAHKYLVLHQRVHKDERPFECSWK 1273
Query: 153 -CPRHFVQVANLRRHLRVHTGERPYAC 178
C F HLR+HTGERPY C
Sbjct: 1274 GCSMTFKWQWARTEHLRLHTGERPYIC 1300
Score = 32.3 bits (70), Expect = 0.37
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 89 DKLFTC--KVCSRSFGYKHVLQNHERTHTGEKPFEC 122
++ F C K CS +F ++ H R HTGE+P+ C
Sbjct: 1265 ERPFECSWKGCSMTFKWQWARTEHLRLHTGERPYIC 1300
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 7/70 (10%)
Query: 136 KTHLRLHTGEKPYSCPH--CPRHFVQVANLRRHLRVHTGERPYACT--RCPARFSDSNQL 191
K L+ H K C H C + F L H RVH ERP+ C+ C F
Sbjct: 1229 KAKLQTH---KRNRCTHEGCGKKFRAHKYLVLHQRVHKDERPFECSWKGCSMTFKWQWAR 1285
Query: 192 KAHALVHEGD 201
H +H G+
Sbjct: 1286 TEHLRLHTGE 1295
>At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 387
Score = 54.4 bits (125), Expect = 8e-08
Identities = 34/90 (37%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 115 TGEKPFECSE--CHKRFTRDHHLKTHLRLHTGEKPYSCPH--CPRHFVQVANLRRHLRVH 170
T E F CS C K F L+ H +H GE+ Y C C + F+ + L+RH +H
Sbjct: 74 TTEILFLCSYDGCGKTFFDVSALRKHSHIH-GERQYVCDQEGCGKKFLDSSKLKRHYLIH 132
Query: 171 TGERPYACT--RCPARFSDSNQLKAHALVH 198
TGER Y CT C FS L++H H
Sbjct: 133 TGERNYICTYEGCGKAFSLDFNLRSHMKTH 162
Score = 49.2 bits (112), Expect = 3e-06
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 97 CSRSFGYKHVLQNHERTHTGEKPFECSE--CHKRFTRDHHLKTHLRLHTGEKPYSCPH-- 152
C + F L+ H HTGE+ + C+ C K F+ D +L++H++ H+ E + CP+
Sbjct: 115 CGKKFLDSSKLKRHYLIHTGERNYICTYEGCGKAFSLDFNLRSHMKTHSQENYHICPYSG 174
Query: 153 CPRHFVQVANLRRHLRVH 170
C + + L+ H+ +
Sbjct: 175 CVKRYAHEYKLKNHVAAY 192
Score = 48.4 bits (110), Expect = 5e-06
Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 153 CPRHFVQVANLRRHLRVHTGERPYACTR--CPARFSDSNQLKAHALVHEGD 201
C + F V+ LR+H +H GER Y C + C +F DS++LK H L+H G+
Sbjct: 86 CGKTFFDVSALRKHSHIH-GERQYVCDQEGCGKKFLDSSKLKRHYLIHTGE 135
Score = 41.5 bits (93), Expect = 6e-04
Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 10/116 (8%)
Query: 88 RDKLFTCKVCSRSFGYKHVLQNHERTHTGEKPFEC--SECHKRFTRDHHLKTHLRLH--- 142
R+ + T + C ++F L++H +TH+ E C S C KR+ ++ LK H+ +
Sbjct: 136 RNYICTYEGCGKAFSLDFNLRSHMKTHSQENYHICPYSGCVKRYAHEYKLKNHVAAYHEK 195
Query: 143 --TGEKPYSCPHCPRHFVQVANLRRHLRVHTGERPYAC--TRCPARFSDSNQLKAH 194
GE P P + ++ + + +RPYAC C + +LK H
Sbjct: 196 NGGGETPKYTPPAEK-VLRTVKTPATVCGPSSDRPYACPYEGCEKAYIHEYKLKLH 250
>At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domains PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1354
Score = 52.0 bits (119), Expect = 4e-07
Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 7/84 (8%)
Query: 97 CSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSCPH--CP 154
C+ SF + L H+R K C K F +L H R+H+ ++P CP C
Sbjct: 1244 CTMSFSSEKQLMLHKRNICPIKG-----CGKNFFSHKYLVQHQRVHSDDRPLKCPWKGCK 1298
Query: 155 RHFVQVANLRRHLRVHTGERPYAC 178
F + H+RVHTG RPY C
Sbjct: 1299 MTFKWAWSRTEHIRVHTGARPYVC 1322
Score = 52.0 bits (119), Expect = 4e-07
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 95 KVCSRSFGYKHVLQNHERTHTGEKPFEC--SECHKRFTRDHHLKTHLRLHTGEKPYSC-- 150
K C ++F L H+R H+ ++P +C C F H+R+HTG +PY C
Sbjct: 1265 KGCGKNFFSHKYLVQHQRVHSDDRPLKCPWKGCKMTFKWAWSRTEHIRVHTGARPYVCAE 1324
Query: 151 PHCPRHFVQVANLRRHLR 168
P C + F V++ RH R
Sbjct: 1325 PDCGQTFRFVSDFSRHKR 1342
>At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 412
Score = 50.4 bits (115), Expect = 1e-06
Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 15/122 (12%)
Query: 90 KLFTCKV--CSRSFGYKHVLQNHERTHTGEKPFE--CSE--CHKRFTRDHHLKTHLRLHT 143
K CK C ++F Y LQ H+ +H E CSE C K FT + LK+H+R +
Sbjct: 213 KQVVCKEIGCGKAFKYPSQLQKHQDSHVKLDSVEAFCSEPGCMKYFTNEECLKSHIR--S 270
Query: 144 GEKPYSCPHCPRHFVQVANLRRHLRVH-----TGERPYACTRCPARFSDSNQLKAH-ALV 197
+ +C C ++ N++RHLR H GE C + FS ++ L+ H V
Sbjct: 271 CHQHINCEICGSKHLK-KNIKRHLRTHDEDSSPGEIKCEVEGCSSTFSKASNLQKHMKAV 329
Query: 198 HE 199
H+
Sbjct: 330 HD 331
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 93 TCKVCSRSFGYKHVLQNHERTHTGEKPFEC--SECHKRFTRDHHLKTHLRLHTGEKPYSC 150
TC+ C F L+ H ++H+ E+ F C +C + R HL HL H G K + C
Sbjct: 67 TCQECGAEFKKPAHLKQHMQSHSLERSFTCYVDDCAASYRRKDHLNRHLLTHKG-KLFKC 125
Query: 151 P--HCPRHFVQVANLRRHLR 168
P +C F N+ RH++
Sbjct: 126 PKENCKSEFSVQGNVGRHVK 145
Score = 45.6 bits (103), Expect = 4e-05
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 122 CSECHKRFTRDHHLKTHLRLHTGEKPYSC--PHCPRHFVQVANLRRHLRVHTGERPYACT 179
C EC F + HLK H++ H+ E+ ++C C + + +L RHL H G + + C
Sbjct: 68 CQECGAEFKKPAHLKQHMQSHSLERSFTCYVDDCAASYRRKDHLNRHLLTHKG-KLFKCP 126
Query: 180 R--CPARFSDSNQLKAH 194
+ C + FS + H
Sbjct: 127 KENCKSEFSVQGNVGRH 143
Score = 42.3 bits (95), Expect = 3e-04
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 22/116 (18%)
Query: 92 FTCKVC--SRSFGY---KHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEK 146
+ C+ C SRS Y KH+ +H+ E+ E E + + +H
Sbjct: 20 YLCQYCGISRSKNYLITKHIQSHHQMELEEERDDEACEVDEESSSNH------------- 66
Query: 147 PYSCPHCPRHFVQVANLRRHLRVHTGERPYAC--TRCPARFSDSNQLKAHALVHEG 200
+C C F + A+L++H++ H+ ER + C C A + + L H L H+G
Sbjct: 67 --TCQECGAEFKKPAHLKQHMQSHSLERSFTCYVDDCAASYRRKDHLNRHLLTHKG 120
Score = 34.3 bits (75), Expect = 0.091
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 9/93 (9%)
Query: 115 TGEKPFECSE--CHKRFTR----DHHLKTHLRLHTGEKPYSCPHCPRHFVQVANLRRHLR 168
TG+K C E C K F H +H++L + E S P C ++F L+ H+R
Sbjct: 210 TGQKQVVCKEIGCGKAFKYPSQLQKHQDSHVKLDSVEAFCSEPGCMKYFTNEECLKSHIR 269
Query: 169 VHTGERPYACTRCPARFSDSNQLKAHALVHEGD 201
+ + C C ++ N +K H H+ D
Sbjct: 270 --SCHQHINCEICGSKHLKKN-IKRHLRTHDED 299
Score = 33.9 bits (74), Expect = 0.12
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 11/93 (11%)
Query: 94 CKVCSRSFGYKHVLQNHERTHT-----GEKPFECSECHKRFTRDHHLKTHLR-LHTGEKP 147
C++C K++ + H RTH GE E C F++ +L+ H++ +H +P
Sbjct: 277 CEICGSKHLKKNI-KRHLRTHDEDSSPGEIKCEVEGCSSTFSKASNLQKHMKAVHDDIRP 335
Query: 148 YSC--PHCPRHFVQVANLRRHLRVHTGERPYAC 178
+ C P C F +H ++G Y C
Sbjct: 336 FVCGFPGCGMRFAYKHVRNKH--ENSGYHVYTC 366
>At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 324
Score = 50.4 bits (115), Expect = 1e-06
Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 15/122 (12%)
Query: 90 KLFTCKV--CSRSFGYKHVLQNHERTHTGEKPFE--CSE--CHKRFTRDHHLKTHLRLHT 143
K CK C ++F Y LQ H+ +H E CSE C K FT + LK+H+R +
Sbjct: 125 KQVVCKEIGCGKAFKYPSQLQKHQDSHVKLDSVEAFCSEPGCMKYFTNEECLKSHIR--S 182
Query: 144 GEKPYSCPHCPRHFVQVANLRRHLRVH-----TGERPYACTRCPARFSDSNQLKAH-ALV 197
+ +C C ++ N++RHLR H GE C + FS ++ L+ H V
Sbjct: 183 CHQHINCEICGSKHLK-KNIKRHLRTHDEDSSPGEIKCEVEGCSSTFSKASNLQKHMKAV 241
Query: 198 HE 199
H+
Sbjct: 242 HD 243
Score = 35.5 bits (78), Expect = 0.039
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Query: 117 EKPFEC--SECHKRFTRDHHLKTHLRLHTGEKPYSCP--HCPRHFVQVANLRRHLR 168
E+ F C +C + R HL HL H G K + CP +C F N+ RH++
Sbjct: 3 ERSFTCYVDDCAASYRRKDHLNRHLLTHKG-KLFKCPKENCKSEFSVQGNVGRHVK 57
Score = 34.3 bits (75), Expect = 0.091
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 9/93 (9%)
Query: 115 TGEKPFECSE--CHKRFTR----DHHLKTHLRLHTGEKPYSCPHCPRHFVQVANLRRHLR 168
TG+K C E C K F H +H++L + E S P C ++F L+ H+R
Sbjct: 122 TGQKQVVCKEIGCGKAFKYPSQLQKHQDSHVKLDSVEAFCSEPGCMKYFTNEECLKSHIR 181
Query: 169 VHTGERPYACTRCPARFSDSNQLKAHALVHEGD 201
+ + C C ++ N +K H H+ D
Sbjct: 182 --SCHQHINCEICGSKHLKKN-IKRHLRTHDED 211
Score = 33.9 bits (74), Expect = 0.12
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 11/93 (11%)
Query: 94 CKVCSRSFGYKHVLQNHERTHT-----GEKPFECSECHKRFTRDHHLKTHLR-LHTGEKP 147
C++C K++ + H RTH GE E C F++ +L+ H++ +H +P
Sbjct: 189 CEICGSKHLKKNI-KRHLRTHDEDSSPGEIKCEVEGCSSTFSKASNLQKHMKAVHDDIRP 247
Query: 148 YSC--PHCPRHFVQVANLRRHLRVHTGERPYAC 178
+ C P C F +H ++G Y C
Sbjct: 248 FVCGFPGCGMRFAYKHVRNKH--ENSGYHVYTC 278
>At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 439
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/105 (24%), Positives = 51/105 (48%), Gaps = 10/105 (9%)
Query: 92 FTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSCP 151
+ C++C++ F LQ H R H + P+ K RD++++ R++ +P
Sbjct: 67 YICEICNQGFQRDQNLQMHRRRH--KVPW------KLLKRDNNIEVKKRVYVCPEPTCLH 118
Query: 152 HCPRHFV-QVANLRRHL-RVHTGERPYACTRCPARFSDSNQLKAH 194
H P H + + +++H R H+ + + C RC ++ + KAH
Sbjct: 119 HNPCHALGDLVGIKKHFRRKHSNHKQWVCERCSKGYAVQSDYKAH 163
Score = 33.1 bits (72), Expect = 0.21
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 106 VLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSCPHCPRHFVQVANLRR 165
+ ++ R H+ K + C C K + K HL+ G + +SC C R F +V +
Sbjct: 131 IKKHFRRKHSNHKQWVCERCSKGYAVQSDYKAHLKT-CGTRGHSC-DCGRVFSRVESFIE 188
Query: 166 H 166
H
Sbjct: 189 H 189
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 135 LKTHLRL-HTGEKPYSCPHCPRHFVQVANLRRHLRVHTGERPYACTRCPARFS 186
+K H R H+ K + C C + + ++ + HL+ G R ++C C FS
Sbjct: 131 IKKHFRRKHSNHKQWVCERCSKGYAVQSDYKAHLKT-CGTRGHSCD-CGRVFS 181
>At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 361
Score = 42.3 bits (95), Expect = 3e-04
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Query: 88 RDKLFTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKP 147
++ F CK C ++F L H R HT E + K+ D K + H ++
Sbjct: 5 KENSFLCKYCYKTFPSGKALGGHIRIHTNENSVGYNGNKKKRLVDQR-KMMAQKHKQQQQ 63
Query: 148 YSCPHCPRHFVQVANLRRHLRVH 170
C C R FV + LR H+ H
Sbjct: 64 VGCRECGRVFVSLKALRGHMACH 86
Score = 34.7 bits (76), Expect = 0.069
Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 3/83 (3%)
Query: 117 EKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSCPHCPRHFVQVANLRRHL-RVHTGERP 175
E F C C+K F L H+R+HT E S + ++ + R+ + + H ++
Sbjct: 6 ENSFLCKYCYKTFPSGKALGGHIRIHTNEN--SVGYNGNKKKRLVDQRKMMAQKHKQQQQ 63
Query: 176 YACTRCPARFSDSNQLKAHALVH 198
C C F L+ H H
Sbjct: 64 VGCRECGRVFVSLKALRGHMACH 86
>At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 362
Score = 42.3 bits (95), Expect = 3e-04
Identities = 26/105 (24%), Positives = 51/105 (48%), Gaps = 9/105 (8%)
Query: 92 FTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSCP 151
+ C++C++ F LQ H R H + P++ KR +D ++ R++ +P
Sbjct: 39 YVCEICNQGFQRDQNLQMHRRRH--KVPWKLL---KRDKKDEEVRK--RVYVCPEPTCLH 91
Query: 152 HCPRHFV-QVANLRRHL-RVHTGERPYACTRCPARFSDSNQLKAH 194
H P H + + +++H R H+ + + C RC ++ + KAH
Sbjct: 92 HDPCHALGDLVGIKKHFRRKHSVHKQWVCERCSKGYAVQSDYKAH 136
Score = 33.1 bits (72), Expect = 0.21
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Query: 106 VLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSCPHCPRHFVQVANLRR 165
+ ++ R H+ K + C C K + K HL+ G + +SC C R F +V +
Sbjct: 104 IKKHFRRKHSVHKQWVCERCSKGYAVQSDYKAHLKT-CGSRGHSC-DCGRVFSRVESFIE 161
Query: 166 HLRVHTGERP 175
H T +P
Sbjct: 162 HQDTCTIRQP 171
>At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 419
Score = 41.9 bits (94), Expect = 5e-04
Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 10/105 (9%)
Query: 92 FTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSCP 151
+ C++C++ F LQ H R H + P+ K R+ + + R++ +P
Sbjct: 70 YVCEICNQGFQRDQNLQMHRRRH--KVPW------KLLKRETNEEVRKRVYVCPEPTCLH 121
Query: 152 HCPRHFV-QVANLRRHL-RVHTGERPYACTRCPARFSDSNQLKAH 194
H P H + + +++H R H+ + + C RC ++ + KAH
Sbjct: 122 HNPCHALGDLVGIKKHFRRKHSNHKQWICERCSKGYAVQSDYKAH 166
Score = 32.7 bits (71), Expect = 0.28
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 106 VLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSCPHCPRHFVQVANLRR 165
+ ++ R H+ K + C C K + K HL+ G + +SC C R F +V +
Sbjct: 134 IKKHFRRKHSNHKQWICERCSKGYAVQSDYKAHLKT-CGTRGHSC-DCGRVFSRVESFIE 191
Query: 166 H 166
H
Sbjct: 192 H 192
>At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 602
Score = 40.7 bits (91), Expect = 0.001
Identities = 27/105 (25%), Positives = 50/105 (47%), Gaps = 10/105 (9%)
Query: 92 FTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSCP 151
F C+VC++ F + LQ H R H P++ + + T++ K +L +P
Sbjct: 81 FICEVCNKGFQREQNLQLHRRGH--NLPWKLKQ---KSTKEVKRKVYL----CPEPSCVH 131
Query: 152 HCP-RHFVQVANLRRHLRVHTGERPYACTRCPARFSDSNQLKAHA 195
H P R + +++H GE+ + C +C R++ + KAH+
Sbjct: 132 HDPSRALGDLTGIKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHS 176
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 98 SRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSC 150
SR+ G ++ H GEK ++C +C KR+ K H + G K Y C
Sbjct: 135 SRALGDLTGIKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTKEYRC 186
>At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 107 LQNH-ERTHTGEKPFECSECH-KRFTRDHHLKTHLRLHTGEKPYSCPHCPRHFVQVANLR 164
++NH +RTH +K F CS CH K+F+ LKTH + H G+ + C C F + L
Sbjct: 320 VKNHYKRTHC-DKSFTCSRCHTKKFSVIADLKTHEK-HCGKNKWLC-SCGTTFSRKDKLF 376
Query: 165 RHLRVHTGERP 175
H+ + G P
Sbjct: 377 GHIALFQGHTP 387
>At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 107 LQNH-ERTHTGEKPFECSECH-KRFTRDHHLKTHLRLHTGEKPYSCPHCPRHFVQVANLR 164
++NH +RTH +K F CS CH K+F+ LKTH + H G+ + C C F + L
Sbjct: 320 VKNHYKRTHC-DKSFTCSRCHTKKFSVIADLKTHEK-HCGKNKWLC-SCGTTFSRKDKLF 376
Query: 165 RHLRVHTGERP 175
H+ + G P
Sbjct: 377 GHIALFQGHTP 387
>At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 40.3 bits (90), Expect = 0.001
Identities = 27/105 (25%), Positives = 50/105 (47%), Gaps = 9/105 (8%)
Query: 92 FTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSCP 151
F C+VC++ F LQ H+R H P++ + R +D K +++ +P
Sbjct: 92 FICEVCNKGFQRDQNLQLHKRGHN--LPWKLKQ---RSNKDVVRK---KVYVCPEPGCVH 143
Query: 152 HCP-RHFVQVANLRRHLRVHTGERPYACTRCPARFSDSNQLKAHA 195
H P R + +++H GE+ + C +C +++ + KAHA
Sbjct: 144 HHPSRALGDLTGIKKHFFRKHGEKKWKCEKCSKKYAVQSDWKAHA 188
Score = 32.7 bits (71), Expect = 0.28
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 98 SRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSC 150
SR+ G ++ H GEK ++C +C K++ K H + G K Y C
Sbjct: 147 SRALGDLTGIKKHFFRKHGEKKWKCEKCSKKYAVQSDWKAHAKT-CGTKEYKC 198
>At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 466
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 8/104 (7%)
Query: 92 FTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSCP 151
F C+VC + F LQ H R H P++ + R +++ + ++ EK
Sbjct: 66 FLCEVCGKGFQRDQNLQLHRRGH--NLPWKLKQ---RTSKEVRKRVYV---CPEKTCVHH 117
Query: 152 HCPRHFVQVANLRRHLRVHTGERPYACTRCPARFSDSNQLKAHA 195
H R + +++H GE+ + C +C R++ + KAH+
Sbjct: 118 HSSRALGDLTGIKKHFCRKHGEKKWTCEKCAKRYAVQSDWKAHS 161
Score = 31.1 bits (67), Expect = 0.85
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 8/70 (11%)
Query: 88 RDKLFTC--KVC-----SRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLR 140
R +++ C K C SR+ G ++ H GEK + C +C KR+ K H +
Sbjct: 103 RKRVYVCPEKTCVHHHSSRALGDLTGIKKHFCRKHGEKKWTCEKCAKRYAVQSDWKAHSK 162
Query: 141 LHTGEKPYSC 150
G + Y C
Sbjct: 163 T-CGTREYRC 171
>At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 516
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 10/105 (9%)
Query: 92 FTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSCP 151
F C VC++ F + LQ H R H P++ + + T++ K +L +P
Sbjct: 83 FICDVCNKGFQREQNLQLHRRGH--NLPWKLKQ---KSTKEVKRKVYL----CPEPTCVH 133
Query: 152 HCP-RHFVQVANLRRHLRVHTGERPYACTRCPARFSDSNQLKAHA 195
H P R + +++H GE+ + C +C R++ + KAH+
Sbjct: 134 HDPSRALGDLTGIKKHYYRKHGEKKWKCEKCSKRYAVQSDWKAHS 178
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 98 SRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSC 150
SR+ G ++ H GEK ++C +C KR+ K H + G K Y C
Sbjct: 137 SRALGDLTGIKKHYYRKHGEKKWKCEKCSKRYAVQSDWKAHSKT-CGTKEYRC 188
>At3g27970.1 68416.m03491 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 354
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 121 ECSECHKRFTRDHHLKTHLRL--HTGEKPYSCPHCPRHFVQVANLRRHL 167
+C+ C+++F + HL H+++ H+G +P +C C +H +LR HL
Sbjct: 16 KCAACYRQFNKLEHLVEHMKISYHSGHEP-TCGVCKKHCRSFESLREHL 63
>At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein
similar to zinc finger protein ID1 GB:AAC18941
GI:3170601 from [Zea mays] contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 467
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 10/105 (9%)
Query: 92 FTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSCP 151
F C+VC++ F + LQ H R H P++ + + R +++ +P
Sbjct: 82 FLCEVCNKGFQREQNLQLHRRGH--NLPWKLKQKSNKEVR-------RKVYLCPEPSCVH 132
Query: 152 HCP-RHFVQVANLRRHLRVHTGERPYACTRCPARFSDSNQLKAHA 195
H P R + +++H GE+ + C +C R++ + KAH+
Sbjct: 133 HDPARALGDLTGIKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHS 177
Score = 32.7 bits (71), Expect = 0.28
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 98 SRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSC 150
+R+ G ++ H GEK ++C +C KR+ K H + G K Y C
Sbjct: 136 ARALGDLTGIKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTKEYRC 187
>At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein
contains Zinc finger,C2H2 type,domain contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 506
Score = 38.3 bits (85), Expect = 0.006
Identities = 24/104 (23%), Positives = 47/104 (45%), Gaps = 8/104 (7%)
Query: 92 FTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSCP 151
F C++C + F LQ H R H P++ + R +++ + ++ EK
Sbjct: 70 FLCEICGKGFQRDQNLQLHRRGH--NLPWKLKQ---RTSKEVRKRVYV---CPEKSCVHH 121
Query: 152 HCPRHFVQVANLRRHLRVHTGERPYACTRCPARFSDSNQLKAHA 195
H R + +++H GE+ + C +C R++ + KAH+
Sbjct: 122 HPTRALGDLTGIKKHFCRKHGEKKWKCEKCAKRYAVQSDWKAHS 165
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 98 SRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSC 150
+R+ G ++ H GEK ++C +C KR+ K H + G + Y C
Sbjct: 124 TRALGDLTGIKKHFCRKHGEKKWKCEKCAKRYAVQSDWKAHSKT-CGTREYRC 175
>At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 500
Score = 37.9 bits (84), Expect = 0.007
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 20/98 (20%)
Query: 120 FECSECHKRFTRDHHLKTHLRLH-------------TGEKPYSCP------HCP-RHFVQ 159
F C C+K F RD +L+ H R H +K Y CP H P R
Sbjct: 61 FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTKEVRKKVYVCPVSGCVHHDPSRALGD 120
Query: 160 VANLRRHLRVHTGERPYACTRCPARFSDSNQLKAHALV 197
+ +++H GE+ + C +C +++ + KAH+ +
Sbjct: 121 LTGIKKHFCRKHGEKKWKCEKCSKKYAVQSDWKAHSKI 158
Score = 34.3 bits (75), Expect = 0.091
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 88 RDKLFTCKV--C-----SRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLR 140
R K++ C V C SR+ G ++ H GEK ++C +C K++ K H +
Sbjct: 98 RKKVYVCPVSGCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKKYAVQSDWKAHSK 157
Query: 141 LHTGEKPYSC 150
+ G K Y C
Sbjct: 158 I-CGTKEYKC 166
>At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 392
Score = 37.9 bits (84), Expect = 0.007
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 11/105 (10%)
Query: 92 FTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSCP 151
F C++C++ F + LQ H+R H P++ K+ T + +K + + EK SC
Sbjct: 6 FFCEICNKGFQREQNLQLHKRGH--NLPWKL----KQKTNKNQVKKKVYI-CPEK--SCV 56
Query: 152 H--CPRHFVQVANLRRHLRVHTGERPYACTRCPARFSDSNQLKAH 194
H R + +++H GE+ + C +C +++ + KAH
Sbjct: 57 HHDPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVISDWKAH 101
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 98 SRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSC 150
+R+ G ++ H GEK ++C +C K++ K H ++ G + + C
Sbjct: 61 ARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVISDWKAHNKI-CGSREFRC 112
>At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 452
Score = 37.9 bits (84), Expect = 0.007
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 20/98 (20%)
Query: 120 FECSECHKRFTRDHHLKTHLRLH-------------TGEKPYSCP------HCP-RHFVQ 159
F C C+K F RD +L+ H R H +K Y CP H P R
Sbjct: 63 FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQKSNKEVKKKVYVCPEVSCVHHDPSRALGD 122
Query: 160 VANLRRHLRVHTGERPYACTRCPARFSDSNQLKAHALV 197
+ +++H GE+ + C +C +++ + KAH+ +
Sbjct: 123 LTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKI 160
Score = 33.5 bits (73), Expect = 0.16
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 98 SRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSC 150
SR+ G ++ H GEK ++C +C K++ K H ++ G K Y C
Sbjct: 117 SRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKI-CGTKEYKC 168
>At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 650
Score = 37.9 bits (84), Expect = 0.007
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 6/102 (5%)
Query: 94 CKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHL--RLHTGEKPYSCP 151
CK+C +SF L H+R H +P + + F+ + K+ L R + Y C
Sbjct: 45 CKICGKSFECYQALGGHQRIH---RPIKEKLSKQEFSEVYPRKSKLQKRPESSSSCYECK 101
Query: 152 HCPRHFVQVANLRRHLRVH-TGERPYACTRCPARFSDSNQLK 192
C + F L H ++H + +R A T+ DS++ K
Sbjct: 102 VCGKIFGCYRGLGGHTKLHRSTKRELASTQDENSLLDSSEAK 143
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 94 CKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHH 134
CK+C +SF L NH+R H E + + C +++T D++
Sbjct: 200 CKICGKSFVCSQGLGNHKRVHR-EISGKLA-CKRKYTEDYN 238
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 90 KLFTCKVCSRSFGYKHVLQNHERTHTG 116
+L CK C R FG + H+R H+G
Sbjct: 322 RLHGCKTCGRKFGTLKGVYGHQRMHSG 348
>At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 446
Score = 37.1 bits (82), Expect = 0.013
Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 11/108 (10%)
Query: 92 FTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSCP 151
F C+VC++ F LQ H R H P++ K+ T +K + + EK +C
Sbjct: 68 FICEVCNKGFKRDQNLQLHRRGH--NLPWKL----KQRTNKEQVKKKVYI-CPEK--TCV 118
Query: 152 H--CPRHFVQVANLRRHLRVHTGERPYACTRCPARFSDSNQLKAHALV 197
H R + +++H GE+ + C +C +++ + KAH+ +
Sbjct: 119 HHDPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVMSDWKAHSKI 166
Score = 31.5 bits (68), Expect = 0.64
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 98 SRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSC 150
+R+ G ++ H GEK ++C +C K++ K H ++ G K Y C
Sbjct: 123 ARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVMSDWKAHSKI-CGTKEYRC 174
>At5g40310.1 68418.m04890 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 348
Score = 36.7 bits (81), Expect = 0.017
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 121 ECSECHKRFTRDHHLKTHLRL--HTGEKPYSCPHCPRHFVQVANLRRHL 167
+C C+++F + HL H+R+ H+ +P +C C +H +LR HL
Sbjct: 7 KCGGCYRQFNKKEHLVEHMRISYHSVHEP-TCGICNKHCRSFDSLREHL 54
>At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 373
Score = 36.7 bits (81), Expect = 0.017
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 136 KTHLRLHTGEKPYSCPHCP-RHFVQVANLRRHLRVHTGERPYACTRCPARFSDSNQLKAH 194
K H + K Y C C +HF +++LR H + H G+ + C+ C +FS ++L +H
Sbjct: 294 KNHYKRSHCPKMYMCRRCSVKHFSVLSDLRTHEK-HCGDIKWVCS-CGTKFSRKDKLMSH 351
Query: 195 ALVHEG 200
+ G
Sbjct: 352 VSLFLG 357
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 122 CSECHKRFTRDHHLKTHLRLHTGE 145
C C K F RD +L+ H+R H E
Sbjct: 219 CQICGKGFKRDANLRMHMRAHGDE 242
>At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 503
Score = 35.9 bits (79), Expect = 0.030
Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 11/106 (10%)
Query: 92 FTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSCP 151
F C++C++ F LQ H R H P++ K+ ++ +K + + + +C
Sbjct: 82 FVCEICNKGFQRDQNLQLHRRGH--NLPWKL----KQRSKQEVIKKKVYICPIK---TCV 132
Query: 152 H--CPRHFVQVANLRRHLRVHTGERPYACTRCPARFSDSNQLKAHA 195
H R + +++H GE+ + C +C +++ + KAHA
Sbjct: 133 HHDASRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHA 178
Score = 32.7 bits (71), Expect = 0.28
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 98 SRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSC 150
SR+ G ++ H GEK ++C +C K++ K H + G + Y C
Sbjct: 137 SRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHAKT-CGTREYKC 188
Score = 31.5 bits (68), Expect = 0.64
Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Query: 135 LKTHLRLHTGEKPYSCPHCPRHFVQVANLRRHLRVHTGERPYACTRCPARFSDSNQLKAH 194
+K H GEK + C C + + ++ + H + G R Y C C FS + H
Sbjct: 146 IKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHAKT-CGTREYKCD-CGTLFSRKDSFITH 203
>At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein
similar to potato PCP1 zinc finger protein, GenBank
accession number X82328 contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 402
Score = 35.5 bits (78), Expect = 0.039
Identities = 23/107 (21%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 92 FTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSCP 151
F C++C++ F LQ H R H P++ + + T++ K +++ +
Sbjct: 82 FVCEICNKGFQRDQNLQLHRRGH--NLPWKLKQ---KNTKEQQKK---KVYVCPETNCAH 133
Query: 152 HCP-RHFVQVANLRRHLRVHTGERPYACTRCPARFSDSNQLKAHALV 197
H P R + +++H GE+ + C +C ++ + KAH +
Sbjct: 134 HHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKFYAVQSDWKAHTKI 180
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 98 SRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSC 150
SR+ G ++ H GEK ++C +C K + K H ++ G + Y C
Sbjct: 137 SRALGDLTGIKKHFCRKHGEKKWKCEKCSKFYAVQSDWKAHTKI-CGTRDYRC 188
>At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein
similar to finger protein pcp1 GB:S48856 from [Solanum
tuberosum] contains Pfam domain, PF00096: Zinc finger,
C2H2 type
Length = 513
Score = 35.5 bits (78), Expect = 0.039
Identities = 22/105 (20%), Positives = 46/105 (43%), Gaps = 9/105 (8%)
Query: 92 FTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSCP 151
F C++C++ F LQ H R H P++ + R + +++ +
Sbjct: 99 FVCEICNKGFQRDQNLQLHRRGH--NLPWKLKQ------RSNKEVIRKKVYVCPEASCVH 150
Query: 152 HCP-RHFVQVANLRRHLRVHTGERPYACTRCPARFSDSNQLKAHA 195
H P R + +++H GE+ + C +C +++ + KAH+
Sbjct: 151 HDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDCKAHS 195
Score = 32.3 bits (70), Expect = 0.37
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 98 SRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSC 150
SR+ G ++ H GEK ++C +C K++ K H + G K Y C
Sbjct: 154 SRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDCKAHSKT-CGTKEYRC 205
>At2g48100.2 68415.m06021 exonuclease family protein contains Pfam
domain PF00929: exonuclease
Length = 344
Score = 35.5 bits (78), Expect = 0.039
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 122 CSECHKRFTRDHHLKTHLRL--HTGEKPYSCPHCPRHFVQVANLRRHLRV 169
C C+K F R HL H+++ H+ +P C C +H ++R HL V
Sbjct: 19 CVACYKMFNRREHLVEHMKISYHSLHQP-RCGVCLKHCKSFESVREHLNV 67
>At2g48100.1 68415.m06020 exonuclease family protein contains Pfam
domain PF00929: exonuclease
Length = 344
Score = 35.5 bits (78), Expect = 0.039
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 122 CSECHKRFTRDHHLKTHLRL--HTGEKPYSCPHCPRHFVQVANLRRHLRV 169
C C+K F R HL H+++ H+ +P C C +H ++R HL V
Sbjct: 19 CVACYKMFNRREHLVEHMKISYHSLHQP-RCGVCLKHCKSFESVREHLNV 67
>At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3)
identical to WIP3 protein [Arabidopsis thaliana]
gi|18027014|gb|AAL55723; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 33.5 bits (73), Expect = 0.16
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Query: 107 LQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSCPHCPRHFVQVANLRRH 166
LQ H + G KPF C +C K +TH + + G K + C C F +L+ H
Sbjct: 252 LQTHYKRKHGSKPFSCGKCGKALAVKGDWRTHEK-NCG-KLWYCT-CGSDFKHKRSLKDH 308
Query: 167 LR-VHTGERPY 176
+R +G P+
Sbjct: 309 IRSFGSGHSPH 319
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/44 (29%), Positives = 22/44 (50%)
Query: 102 GYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGE 145
G + + + + H G F CS C K F R ++++ H+ H E
Sbjct: 162 GKRFWIPSPAQIHVGPMQFACSICSKTFNRYNNMQMHMWGHGSE 205
>At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 215
Score = 33.1 bits (72), Expect = 0.21
Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Query: 90 KLFTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYS 149
K + C VC +SF L H+ +H + + + T + ++ L +G K ++
Sbjct: 92 KDYKCSVCGKSFPSYQALGGHKTSHRKPVSVDVNNSNGTVTNNGNISNGLVGQSG-KTHN 150
Query: 150 CPHCPRHFVQVANLRRHLRVH 170
C C + F L H R H
Sbjct: 151 CSICFKSFPSGQALGGHKRCH 171
>At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein
(ZAT11) contains Pfam domain, PF00096: Zinc finger, C2H2
type
Length = 178
Score = 33.1 bits (72), Expect = 0.21
Identities = 23/92 (25%), Positives = 35/92 (38%), Gaps = 10/92 (10%)
Query: 107 LQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSCPHCPRHFVQVANLRRH 166
L H +HT + FEC C+KRF+ L H H P+ V+ +++
Sbjct: 35 LNQHTESHTSNQ-FECKTCNKRFSSFQALGGHRASHKK---------PKLTVEQKDVKHL 84
Query: 167 LRVHTGERPYACTRCPARFSDSNQLKAHALVH 198
+ G + C+ C F L H H
Sbjct: 85 SNDYKGNHFHKCSICSQSFGTGQALGGHMRRH 116
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/30 (40%), Positives = 14/30 (46%)
Query: 94 CKVCSRSFGYKHVLQNHERTHTGEKPFECS 123
C +CS+SFG L H R H E S
Sbjct: 96 CSICSQSFGTGQALGGHMRRHRSSMTVEPS 125
>At5g54340.1 68418.m06767 zinc finger (C2H2 type) protein-related
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 244
Score = 32.7 bits (71), Expect = 0.28
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 89 DKLFTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFT 130
+K++ C +C R+F H L H TH ++ E + R +
Sbjct: 44 NKIYICYLCKRAFPTPHALGGHGTTHKEDRELERQQIESRLS 85
>At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5)
identical to WIP5 protein [Arabidopsis thaliana]
gi|18376498|emb|CAC86167; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 31.9 bits (69), Expect = 0.49
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Query: 107 LQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSCPHCPRHFVQVANLRRH 166
LQ H + G KPF C C K F +TH + + G K + C C F +L+ H
Sbjct: 249 LQTHYKRKHGSKPFACRMCGKAFAVKGDWRTHEK-NCG-KLWYC-SCGSDFKHKRSLKDH 305
Query: 167 LR 168
++
Sbjct: 306 VK 307
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 90 KLFTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLR 140
K F C++C ++F K + HE+ + G K + CS C F LK H++
Sbjct: 260 KPFACRMCGKAFAVKGDWRTHEK-NCG-KLWYCS-CGSDFKHKRSLKDHVK 307
>At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zinc
finger (C2H2 type) protein TT1 identical to transparent
testa 1 GI:18253279 from [Arabidopsis thaliana];
contains Pfam profile PF00096: Zinc finger, C2H2 type
Length = 303
Score = 31.9 bits (69), Expect = 0.49
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Query: 107 LQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSCPHCPRHFVQVANLRRH 166
LQ H + G KPF C C K +TH + + G K + C C F +L+ H
Sbjct: 216 LQTHYKRKHGHKPFSCRLCGKLLAVKGDWRTHEK-NCG-KRWVCV-CGSDFKHKRSLKDH 272
Query: 167 LRVH-TGERPY 176
++ +G PY
Sbjct: 273 VKAFGSGHGPY 283
>At5g56200.1 68418.m07012 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 493
Score = 31.5 bits (68), Expect = 0.64
Identities = 23/82 (28%), Positives = 29/82 (35%), Gaps = 5/82 (6%)
Query: 117 EKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSCPHCPRHFVQVANLRRHLRVHTGERPY 176
EK C EC KRF L H R+H E P+ + R G+
Sbjct: 76 EKKHICCECGKRFVSGKALGGHKRIHVLETRKFSMMRPKMVSGMVG-----RSERGDLEV 130
Query: 177 ACTRCPARFSDSNQLKAHALVH 198
AC C +F+ L H H
Sbjct: 131 ACCVCYKKFTSMKALYGHMRFH 152
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 112 RTHTGEKPFECSECHKRFTRDHHLKTHLRLH 142
R+ G+ C C+K+FT L H+R H
Sbjct: 122 RSERGDLEVACCVCYKKFTSMKALYGHMRFH 152
>At5g42640.1 68418.m05191 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 300
Score = 31.5 bits (68), Expect = 0.64
Identities = 14/35 (40%), Positives = 16/35 (45%)
Query: 164 RRHLRVHTGERPYACTRCPARFSDSNQLKAHALVH 198
R H +T PY C RC F S + AH L H
Sbjct: 231 RTHSLPYTKYGPYTCPRCNGVFDTSQKFAAHMLSH 265
>At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2)
identical to WIP2 protein [Arabidopsis thaliana]
gi|18027012|gb|AAL55722; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 383
Score = 31.1 bits (67), Expect = 0.85
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Query: 107 LQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSCPHCPRHFVQVANLRRH 166
LQ H + G KPF C +C K F +TH + + G+ Y C F +L+ H
Sbjct: 288 LQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEK-NCGKLWYCI--CGSDFKHKRSLKDH 344
Query: 167 LR 168
++
Sbjct: 345 IK 346
>At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 367
Score = 31.1 bits (67), Expect = 0.85
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
Query: 94 CKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTH-LRLH 142
C C R F + +L H++ K F+C CHK+ + + H L++H
Sbjct: 14 CYYCDREFDDEKILVQHQKA----KHFKCHVCHKKLSTASGMVIHVLQVH 59
>At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4)
identical to WIP4 protein [Arabidopsis thaliana]
gi|18376500|emb|CAC86168; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 412
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Query: 107 LQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSCPHCPRHFVQVANLRRH 166
LQ H + G +PF C C K F +TH + + G K + C C F +L+ H
Sbjct: 327 LQTHYKRKHGVRPFACRRCGKAFAVKGDWRTHEK-NCG-KLWYC-SCGSDFKHKRSLKDH 383
Query: 167 LR 168
++
Sbjct: 384 VK 385
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 163 LRRHLRVHTGERPYACTRCPARFSDSNQLKAH 194
L+ H + G RP+AC RC F+ + H
Sbjct: 327 LQTHYKRKHGVRPFACRRCGKAFAVKGDWRTH 358
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Query: 92 FTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLR 140
F C+ C ++F K + HE+ + G K + CS C F LK H++
Sbjct: 340 FACRRCGKAFAVKGDWRTHEK-NCG-KLWYCS-CGSDFKHKRSLKDHVK 385
>At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 88 RDKLFTCKVCSRSFGYKHVLQNHERTHTGEKPFECSE 124
+++ F CK CS+ F L H RTH E + E
Sbjct: 5 KERKFVCKFCSKRFPCGKSLGGHIRTHMNENSADSDE 41
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 117 EKPFECSECHKRFTRDHHLKTHLRLHTGE 145
E+ F C C KRF L H+R H E
Sbjct: 6 ERKFVCKFCSKRFPCGKSLGGHIRTHMNE 34
>At1g09920.1 68414.m01116 TRAF-type zinc finger-related contains
Pfam PF02176: TRAF-type zinc finger; similar to TNF
receptor associated factor 4 (GI:7274404) [Mus musculus]
(GI:7274404); similar to Cysteine rich motif Associated
to Ring and Traf domains protein (mCART1)(GI:1041446)
[Mus musculus]
Length = 192
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 6/88 (6%)
Query: 94 CKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSCPHC 153
CK+C KH +++ TH P CS C + R+ +H ++ +C C
Sbjct: 38 CKICGDMVPKKHAEEHYLNTHA---PIACSMCKETIERE-IFDSHKGEICPKRIVTCEFC 93
Query: 154 PRHFVQVANLRRHLRVHTGERPYACTRC 181
+ +L H V G R C +C
Sbjct: 94 -EFPLPAVDLAEHQEV-CGNRTELCYQC 119
>At3g46070.1 68416.m04985 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 170
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/87 (24%), Positives = 30/87 (34%), Gaps = 6/87 (6%)
Query: 88 RDKLFTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKP 147
+ ++F CK C R F L H +H+ + + T HT
Sbjct: 32 KKRVFRCKTCERDFDSFQALGGHRASHSKLTNSDDKSLPGSPKKKPKTTTTTTAHT---- 87
Query: 148 YSCPHCPRHFVQVANLRRHLRVHTGER 174
CP C F L H+R H E+
Sbjct: 88 --CPICGLEFPMGQALGGHMRKHRNEK 112
>At1g13290.1 68414.m01543 zinc finger (C2H2 type) family protein
contains Pfam domian PF00096: Zinc finger, C2H2 type
Length = 302
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 107 LQNHERTHTGEKPFEC-SECHKRFTRDHHLKTHLRLHTGEKPYSCPHCPRHFVQVANLRR 165
LQ H + G KPF C +C K F +TH + + G K + C C F +L+
Sbjct: 173 LQTHYKRKHGAKPFRCRKKCEKTFAVRGDWRTHEK-NCG-KLWFCV-CGSDFKHKRSLKD 229
Query: 166 HLR 168
H+R
Sbjct: 230 HVR 232
>At5g27880.1 68418.m03344 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 278
Score = 29.9 bits (64), Expect = 2.0
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 89 DKLFTCKVCSRSFGYKHVLQNHERTHTGEKPFE 121
+K++TC C + F L H+ H E+ ++
Sbjct: 77 NKIYTCHFCKKGFSTSQALGGHQNAHKQEREWD 109
>At5g25160.1 68418.m02983 zinc finger (C2H2 type) family protein
(ZFP3) identical to zinc finger protein, ZFP3
gi|790677|gb|AAA87299; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 235
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 90 KLFTCKVCSRSFGYKHVLQNHERTHTGEK 118
KLF+C C R+F L H+ H E+
Sbjct: 59 KLFSCNYCQRTFYSSQALGGHQNAHKRER 87
>At5g10970.1 68418.m01275 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type domain, Prosite:PS00028
Length = 272
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 90 KLFTCKVCSRSFGYKHVLQNHERTHTGEK 118
KLF+C C R+F L H+ H E+
Sbjct: 102 KLFSCNYCQRTFYSSQALGGHQNAHKRER 130
>At4g23380.1 68417.m03371 hypothetical protein predicted proteins,
Arabidopsis thaliana
Length = 400
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Query: 120 FECSECHKRFTRDHHLKTHLRLHTGE-KPYSCPHCP 154
F+C + HK+ DHHL LR H+ + KP S P P
Sbjct: 63 FDCIDIHKQLAFDHHL---LRNHSVKLKPTSVPKWP 95
>At4g17505.1 68417.m02619 expressed protein contains Pfam profile
PF03080: Arabidopsis proteins of unknown function;
expression supported by MPSS
Length = 322
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/47 (29%), Positives = 21/47 (44%)
Query: 120 FECSECHKRFTRDHHLKTHLRLHTGEKPYSCPHCPRHFVQVANLRRH 166
FEC + +K+ + H L H +L P CPR V + R +
Sbjct: 29 FECVDFYKQPSLQHPLLKHHKLQIMSSPRRSTICPRGMVPIQKFRNN 75
>At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 314
Score = 29.9 bits (64), Expect = 2.0
Identities = 23/80 (28%), Positives = 30/80 (37%), Gaps = 9/80 (11%)
Query: 92 FTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKP-YSC 150
F C+ C + F L H +H K C T+ ++T L EK + C
Sbjct: 194 FKCETCGKVFKSYQALGGHRASHKKNK--AC------MTKTEQVETEYVLGVKEKKVHEC 245
Query: 151 PHCPRHFVQVANLRRHLRVH 170
P C R F L H R H
Sbjct: 246 PICFRVFTSGQALGGHKRSH 265
>At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 917
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/79 (25%), Positives = 30/79 (37%), Gaps = 8/79 (10%)
Query: 92 FTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSCP 151
+ C VC R L H+ +H + P E + K + +L K + C
Sbjct: 750 YQCNVCGRELPSYQALGGHKASHRTKPPVENATGEKMRPK--------KLAPSGKIHKCS 801
Query: 152 HCPRHFVQVANLRRHLRVH 170
C R F +L H R+H
Sbjct: 802 ICHREFSTGQSLGGHKRLH 820
>At4g25610.1 68417.m03689 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 586
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 150 CPHCPRHFVQVANLRRHLRVHTGER 174
C C R F N RRH R+H +R
Sbjct: 63 CEKCSREFCSPVNFRRHNRMHRRQR 87
>At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1)
identical to Cys2/His2-type zinc finger protein 1
[Arabidopsis thaliana] gi|6009887|dbj|BAA85108
Length = 245
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 90 KLFTCKVCSRSFGYKHVLQNHERTH 114
K+ TC +C +SF L H+R H
Sbjct: 162 KIHTCSICFKSFASGQALGGHKRCH 186
>At1g80220.1 68414.m09388 hypothetical protein
Length = 255
Score = 28.7 bits (61), Expect = 4.5
Identities = 25/95 (26%), Positives = 33/95 (34%), Gaps = 4/95 (4%)
Query: 103 YKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSCPHCPRHFV-QVA 161
+K +N+ + + K C C R KP SCP F A
Sbjct: 84 FKQFCRNNRKKRSNTKTLHCPLCRGEVLETKKASKTARRFMNAKPRSCPVDGCEFSGTYA 143
Query: 162 NLRRHLRV-HTGERPYACTRCPARFSDSNQLKAHA 195
+L +HL+ H G P P R S L HA
Sbjct: 144 HLNKHLKTEHQGLVPAKVD--PQRQSRWEMLVRHA 176
>At1g24625.1 68414.m03099 zinc finger (C2H2 type) family protein
(ZFP7) identical to zinc finger protein, ZFP7
gi|790685|gb|AAA87303; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 209
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/45 (26%), Positives = 17/45 (37%)
Query: 90 KLFTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHH 134
++F+C C R F L H+ H E+ H HH
Sbjct: 57 RVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFGHH 101
>At5g59820.1 68418.m07500 zinc finger (C2H2 type) family protein
(ZAT12) identical to zinc finger protein ZAT12
[Arabidopsis thaliana] gi|1418325|emb|CAA67232
Length = 162
Score = 28.3 bits (60), Expect = 6.0
Identities = 22/84 (26%), Positives = 31/84 (36%), Gaps = 13/84 (15%)
Query: 90 KLFTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYS 149
++FTCK C + F L H +H +KP + L + L +
Sbjct: 37 RVFTCKTCLKQFHSFQALGGHRASH--KKP-----------NNDALSSGLMKKVKTSSHP 83
Query: 150 CPHCPRHFVQVANLRRHLRVHTGE 173
CP C F L H+R H E
Sbjct: 84 CPICGVEFPMGQALGGHMRRHRNE 107
>At5g09850.1 68418.m01139 transcription elongation factor-related
low similarity to SP|P10712 Transcription elongation
factor S-II (Transcription elongation factor A) {Mus
musculus}
Length = 353
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 246 DEWPEQTEPEDLSLPRRPATPDSPTDLRMHS 276
DEW + +P DL P A DSP +H+
Sbjct: 197 DEWVKFNQPGDLEPPSLIADEDSPVQKALHN 227
>At5g05120.1 68418.m00543 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 201
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 145 EKP-YSCPHCPRHFVQVANLRRHLRVHTGER 174
E P Y C +CPR F + L H H ER
Sbjct: 23 ENPIYKCKYCPRKFDKTQALGGHQNAHRKER 53
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 91 LFTCKVCSRSFGYKHVLQNHERTHTGEKPFE 121
++ CK C R F L H+ H E+ E
Sbjct: 26 IYKCKYCPRKFDKTQALGGHQNAHRKEREVE 56
>At3g53820.1 68416.m05946 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 142
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 174 RPYACTRCPARFSDSNQLKAHALVHEGD 201
RPY C C FS++ L H +H D
Sbjct: 19 RPYICEFCERGFSNAQALGGHMNIHRKD 46
>At3g10470.1 68416.m01255 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 398
Score = 28.3 bits (60), Expect = 6.0
Identities = 26/113 (23%), Positives = 39/113 (34%), Gaps = 11/113 (9%)
Query: 91 LFTCKVCSRSFGYKHVLQNHERTHTGEKP---FECSECHKRFTRDHHLKTHLRLHTGEKP 147
++ CK C R+F L H +H K + HK+ D + HL P
Sbjct: 181 VYQCKTCDRTFPSFQALGGHRASHKKPKAAMGLHSNHDHKKSNYDDAVSLHLNNVLTTTP 240
Query: 148 YSCPHCPRHFVQVANLRRHLRVHTGERPYACTRCPARFSDSNQLKAHALVHEG 200
+ + + V + +VH C C A F+ L H H G
Sbjct: 241 NN--NSNHRSLVVYGKGSNNKVH------ECGICGAEFTSGQALGGHMRRHRG 285
>At1g68360.1 68414.m07808 zinc finger protein-related similar to
zinc finger protein GI:790683 from [Arabidopsis
thaliana]
Length = 244
Score = 28.3 bits (60), Expect = 6.0
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 89 DKLFTCKVCSRSFGYKHVLQNHERTHTGEK 118
++ + C+ C R FG L H+ H E+
Sbjct: 70 ERKYECQYCCREFGNSQALGGHQNAHKKER 99
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/31 (38%), Positives = 14/31 (45%)
Query: 144 GEKPYSCPHCPRHFVQVANLRRHLRVHTGER 174
GE+ Y C +C R F L H H ER
Sbjct: 69 GERKYECQYCCREFGNSQALGGHQNAHKKER 99
>At5g48890.1 68418.m06048 hypothetical protein
Length = 173
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 90 KLFTCKVCSRSFGYKHVLQNHERTHTGEK 118
++F C CSR F L H+ H E+
Sbjct: 33 RIFPCLFCSRKFHSSQALGGHQNAHKKER 61
>At5g03510.1 68418.m00307 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 292
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/28 (42%), Positives = 14/28 (50%)
Query: 117 EKPFECSECHKRFTRDHHLKTHLRLHTG 144
EK ECS C F+ L H+R H G
Sbjct: 189 EKTHECSICKAEFSSGQALGGHMRRHRG 216
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta repeat;
similar to Coatomer alpha subunit (Alpha-coat protein)
(Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621) [Homo sapiens]
Length = 1216
Score = 27.9 bits (59), Expect = 7.9
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 137 THLRLHTGEKPYSCPHCPRHFV 158
T++ ++ G+K SCP+C FV
Sbjct: 1164 TYVPIYRGQKDVSCPYCTARFV 1185
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Query: 223 CASAGCEPDTPSP-PVATASDWRWDEWPEQTEPEDLSLPRRPATPDSPT 270
C+ +PSP P T+ P +P D S P P TP+ P+
Sbjct: 384 CSGGSNGGSSPSPNPPRTSEPKPSKPEPVMPKPSDSSKPETPKTPEQPS 432
>At1g02030.1 68414.m00123 zinc finger (C2H2 type) family protein
identical to C2H2 zinc finger protein ZAT1 [Arabidopsis
thaliana] gi|1418321|emb|CAA67227; contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 267
Score = 27.9 bits (59), Expect = 7.9
Identities = 22/83 (26%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Query: 88 RDKLFTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKP 147
R+K F C+ C + F L H +H +K E + LK + T
Sbjct: 156 RNKWFECETCEKVFKSYQALGGHRASHK-KKIAETDQ-----LGSDELKKKKKKSTSSH- 208
Query: 148 YSCPHCPRHFVQVANLRRHLRVH 170
+ CP C + F L H R H
Sbjct: 209 HECPICAKVFTSGQALGGHKRSH 231
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.320 0.133 0.447
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,261,168
Number of Sequences: 28952
Number of extensions: 186371
Number of successful extensions: 910
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 667
Number of HSP's gapped (non-prelim): 215
length of query: 277
length of database: 12,070,560
effective HSP length: 80
effective length of query: 197
effective length of database: 9,754,400
effective search space: 1921616800
effective search space used: 1921616800
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 59 (27.9 bits)
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