Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000905-TA|BGIBMGA000905-PA|IPR007087|Zinc finger,
C2H2-type, IPR007086|Zinc finger, C2H2-subtype
(277 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 224 7e-61
L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protei... 151 6e-39
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 127 1e-31
AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein pr... 118 4e-29
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 84 1e-18
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 82 4e-18
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 65 6e-13
DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped prot... 57 1e-10
L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protei... 54 1e-09
L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protei... 52 4e-09
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 25 0.62
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 224 bits (547), Expect = 7e-61
Identities = 92/114 (80%), Positives = 100/114 (87%)
Query: 88 RDKLFTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKP 147
RD+ FTC+VC+RSFGYKHVLQNHERTHTGEKPFEC ECHKRFTRDHHLKTH+RLHTGE+P
Sbjct: 131 RDRPFTCEVCNRSFGYKHVLQNHERTHTGEKPFECQECHKRFTRDHHLKTHMRLHTGERP 190
Query: 148 YSCPHCPRHFVQVANLRRHLRVHTGERPYACTRCPARFSDSNQLKAHALVHEGD 201
Y C HC R FVQVANLRRHLRVHTGERPY C C +FSDSNQLKAH L+H +
Sbjct: 191 YRCEHCDRQFVQVANLRRHLRVHTGERPYGCEHCSMKFSDSNQLKAHVLIHTNE 244
Score = 111 bits (268), Expect = 4e-27
Identities = 43/106 (40%), Positives = 63/106 (59%)
Query: 89 DKLFTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPY 148
+K F C+ C + F H L+ H R HTGE+P+ C C ++F + +L+ HLR+HTGE+PY
Sbjct: 160 EKPFECQECHKRFTRDHHLKTHMRLHTGERPYRCEHCDRQFVQVANLRRHLRVHTGERPY 219
Query: 149 SCPHCPRHFVQVANLRRHLRVHTGERPYACTRCPARFSDSNQLKAH 194
C HC F L+ H+ +HT E+P+ C +C RF + L H
Sbjct: 220 GCEHCSMKFSDSNQLKAHVLIHTNEKPFECDKCRGRFRRRHHLVHH 265
>L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protein
protein.
Length = 74
Score = 151 bits (366), Expect = 6e-39
Identities = 61/71 (85%), Positives = 63/71 (88%)
Query: 111 ERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSCPHCPRHFVQVANLRRHLRVH 170
ERTHTGEKPFEC ECHKRFTRDHHLKTH+RLHTGE+PY C HC R FVQVANLRRHLRVH
Sbjct: 1 ERTHTGEKPFECQECHKRFTRDHHLKTHMRLHTGERPYRCEHCDRQFVQVANLRRHLRVH 60
Query: 171 TGERPYACTRC 181
TGERPY C C
Sbjct: 61 TGERPYGCEHC 71
Score = 82.2 bits (194), Expect = 4e-18
Identities = 30/65 (46%), Positives = 43/65 (66%)
Query: 89 DKLFTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPY 148
+K F C+ C + F H L+ H R HTGE+P+ C C ++F + +L+ HLR+HTGE+PY
Sbjct: 7 EKPFECQECHKRFTRDHHLKTHMRLHTGERPYRCEHCDRQFVQVANLRRHLRVHTGERPY 66
Query: 149 SCPHC 153
C HC
Sbjct: 67 GCEHC 71
Score = 72.9 bits (171), Expect = 2e-15
Identities = 28/62 (45%), Positives = 38/62 (61%)
Query: 140 RLHTGEKPYSCPHCPRHFVQVANLRRHLRVHTGERPYACTRCPARFSDSNQLKAHALVHE 199
R HTGEKP+ C C + F + +L+ H+R+HTGERPY C C +F L+ H VH
Sbjct: 2 RTHTGEKPFECQECHKRFTRDHHLKTHMRLHTGERPYRCEHCDRQFVQVANLRRHLRVHT 61
Query: 200 GD 201
G+
Sbjct: 62 GE 63
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 127 bits (306), Expect = 1e-31
Identities = 48/108 (44%), Positives = 71/108 (65%)
Query: 94 CKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSCPHC 153
C++C +S+ L+ H RTH+GEKP+ C +C+K F++ +L H+R H+GEKP+ CP C
Sbjct: 252 CRICGKSYARPSTLKTHLRTHSGEKPYRCIDCNKSFSQAANLTAHVRTHSGEKPFRCPVC 311
Query: 154 PRHFVQVANLRRHLRVHTGERPYACTRCPARFSDSNQLKAHALVHEGD 201
R F Q +++ H+R H+GERPY C C FSDS+ L H +H G+
Sbjct: 312 DRRFSQSSSVTTHMRTHSGERPYRCRLCKKAFSDSSTLTKHLRIHSGE 359
Score = 118 bits (285), Expect = 4e-29
Identities = 49/110 (44%), Positives = 67/110 (60%)
Query: 89 DKLFTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPY 148
+K + C C++SF L H RTH+GEKPF C C +RF++ + TH+R H+GE+PY
Sbjct: 275 EKPYRCIDCNKSFSQAANLTAHVRTHSGEKPFRCPVCDRRFSQSSSVTTHMRTHSGERPY 334
Query: 149 SCPHCPRHFVQVANLRRHLRVHTGERPYACTRCPARFSDSNQLKAHALVH 198
C C + F + L +HLR+H+GE+PY C C RFS S L H VH
Sbjct: 335 RCRLCKKAFSDSSTLTKHLRIHSGEKPYECKLCLLRFSQSGNLNRHMRVH 384
Score = 96.3 bits (229), Expect = 2e-22
Identities = 40/85 (47%), Positives = 51/85 (60%)
Query: 117 EKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSCPHCPRHFVQVANLRRHLRVHTGERPY 176
+KP C C K + R LKTHLR H+GEKPY C C + F Q ANL H+R H+GE+P+
Sbjct: 247 QKPNVCRICGKSYARPSTLKTHLRTHSGEKPYRCIDCNKSFSQAANLTAHVRTHSGEKPF 306
Query: 177 ACTRCPARFSDSNQLKAHALVHEGD 201
C C RFS S+ + H H G+
Sbjct: 307 RCPVCDRRFSQSSSVTTHMRTHSGE 331
>AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein
protein.
Length = 136
Score = 118 bits (285), Expect = 4e-29
Identities = 49/110 (44%), Positives = 67/110 (60%)
Query: 89 DKLFTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPY 148
+K + C C++SF L H RTH+GEKPF C C +RF++ + TH+R H+GE+PY
Sbjct: 19 EKPYRCIDCNKSFSQAANLTAHVRTHSGEKPFRCPVCDRRFSQSSSVTTHMRTHSGERPY 78
Query: 149 SCPHCPRHFVQVANLRRHLRVHTGERPYACTRCPARFSDSNQLKAHALVH 198
C C + F + L +HLR+H+GE+PY C C RFS S L H VH
Sbjct: 79 RCRLCKKAFSDSSTLTKHLRIHSGEKPYECKLCLLRFSQSGNLNRHMRVH 128
Score = 118 bits (283), Expect = 6e-29
Identities = 46/103 (44%), Positives = 67/103 (65%)
Query: 99 RSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSCPHCPRHFV 158
+S+ L+ H RTH+GEKP+ C +C+K F++ +L H+R H+GEKP+ CP C R F
Sbjct: 1 KSYARPSTLKTHLRTHSGEKPYRCIDCNKSFSQAANLTAHVRTHSGEKPFRCPVCDRRFS 60
Query: 159 QVANLRRHLRVHTGERPYACTRCPARFSDSNQLKAHALVHEGD 201
Q +++ H+R H+GERPY C C FSDS+ L H +H G+
Sbjct: 61 QSSSVTTHMRTHSGERPYRCRLCKKAFSDSSTLTKHLRIHSGE 103
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 84.2 bits (199), Expect = 1e-18
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
Query: 94 CKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKP----YS 149
C +C R K LQ H RTHTGE+PF+C C + FT +LKTH+ +H + P +
Sbjct: 137 CVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPMRVLHQ 196
Query: 150 CPHCPRHFVQVANLRRHLRVHTGE 173
CP C + F L++H+R+HTGE
Sbjct: 197 CPVCHKKFTNALVLQQHIRLHTGE 220
Score = 65.7 bits (153), Expect = 4e-13
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 114 HTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSCPHCPRHFVQVANLRRHLRVHTGE 173
H P +C CH+ + L+ H R HTGE+P+ C C R F NL+ H+ VH +
Sbjct: 129 HKLSDPNQCVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAK 188
Query: 174 RP----YACTRCPARFSDSNQLKAHALVHEGD 201
P + C C +F+++ L+ H +H G+
Sbjct: 189 PPMRVLHQCPVCHKKFTNALVLQQHIRLHTGE 220
Score = 55.6 bits (128), Expect = 4e-10
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 89 DKLFTCKVCSRSFGYKHVLQNHERTHTGEKPF----ECSECHKRFTRDHHLKTHLRLHTG 144
++ F CK+C R+F K L+ H H + P +C CHK+FT L+ H+RLHTG
Sbjct: 160 ERPFKCKICGRAFTTKGNLKTHMGVHRAKPPMRVLHQCPVCHKKFTNALVLQQHIRLHTG 219
Query: 145 E 145
E
Sbjct: 220 E 220
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 82.2 bits (194), Expect = 4e-18
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 4/89 (4%)
Query: 88 RDKLFTCKV--CSRSFGYKHVLQNHERTHTGEKPFECSE--CHKRFTRDHHLKTHLRLHT 143
+ + +C + C + +G L+ H R HTGE+PF C+ C KRFTR L+ HLR HT
Sbjct: 311 KKNIHSCHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHT 370
Query: 144 GEKPYSCPHCPRHFVQVANLRRHLRVHTG 172
GEK ++CP C + F++ +L +H++ H G
Sbjct: 371 GEKRFACPICNKRFMRSDHLAKHVKTHNG 399
Score = 79.0 bits (186), Expect = 4e-17
Identities = 35/79 (44%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 125 CHKRFTRDHHLKTHLRLHTGEKPYSCP--HCPRHFVQVANLRRHLRVHTGERPYACTRCP 182
C K + + HLK HLR HTGE+P+ C C + F + L+RHLR HTGE+ +AC C
Sbjct: 322 CGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPICN 381
Query: 183 ARFSDSNQLKAHALVHEGD 201
RF S+ L H H G+
Sbjct: 382 KRFMRSDHLAKHVKTHNGN 400
Score = 55.6 bits (128), Expect = 4e-10
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 8/95 (8%)
Query: 111 ERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSC--PHCPRHFVQVANLRRHLR 168
+R +TG +C C + R HLR + +SC P C + + + ++L+ HLR
Sbjct: 282 QRRYTGRATCDCPNCQEA-ERLGPAGVHLRK---KNIHSCHIPGCGKVYGKTSHLKAHLR 337
Query: 169 VHTGERPYACT--RCPARFSDSNQLKAHALVHEGD 201
HTGERP+ C C RF+ S++L+ H H G+
Sbjct: 338 WHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGE 372
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 64.9 bits (151), Expect = 6e-13
Identities = 35/106 (33%), Positives = 45/106 (42%), Gaps = 1/106 (0%)
Query: 90 KLFTCKVCSRSFGYKHVLQNHERTHTGE-KPFECSECHKRFTRDHHLKTHLRLHTGEKPY 148
K F CK C K NH + H E K C +C HHL+ HLR H G KP+
Sbjct: 200 KTFKCKQCDFVAITKLEQWNHSKVHIREDKRLTCPKCPFITEYKHHLEYHLRNHAGSKPF 259
Query: 149 SCPHCPRHFVQVANLRRHLRVHTGERPYACTRCPARFSDSNQLKAH 194
C C V + L H++ H+ Y+C C + LK H
Sbjct: 260 QCNKCDYTCVNKSMLNSHMKSHSNVYRYSCRDCSYATKYCHSLKIH 305
Score = 62.9 bits (146), Expect = 3e-12
Identities = 29/80 (36%), Positives = 39/80 (48%)
Query: 89 DKLFTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPY 148
DK TC C YKH L+ H R H G KPF+C++C L +H++ H+ Y
Sbjct: 228 DKRLTCPKCPFITEYKHHLEYHLRNHAGSKPFQCNKCDYTCVNKSMLNSHMKSHSNVYRY 287
Query: 149 SCPHCPRHFVQVANLRRHLR 168
SC C +L+ HLR
Sbjct: 288 SCRDCSYATKYCHSLKIHLR 307
Score = 50.4 bits (115), Expect = 1e-08
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
Query: 113 THTGEKPFECSECH----KRFTRDHHLKTHLRLHTGEKPYSCPHCPRHFVQVANLRRHLR 168
+H K F+C +C + + +H K H+R +K +CP CP +L HLR
Sbjct: 195 SHGKIKTFKCKQCDFVAITKLEQWNHSKVHIR---EDKRLTCPKCPFITEYKHHLEYHLR 251
Query: 169 VHTGERPYACTRCPARFSDSNQLKAHALVH 198
H G +P+ C +C + + L +H H
Sbjct: 252 NHAGSKPFQCNKCDYTCVNKSMLNSHMKSH 281
Score = 27.1 bits (57), Expect = 0.15
Identities = 13/50 (26%), Positives = 17/50 (34%)
Query: 145 EKPYSCPHCPRHFVQVANLRRHLRVHTGERPYACTRCPARFSDSNQLKAH 194
E+ SC +C F H+ H P+ C C SD H
Sbjct: 468 EEGNSCQYCNIAFGDAVLYTIHMGYHGFHNPFTCNMCGVECSDKVSFFLH 517
Score = 25.4 bits (53), Expect = 0.47
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 93 TCKVCSRSFGYKHVLQNHERTHTGEKPFECSEC 125
+C+ C+ +FG + H H PF C+ C
Sbjct: 472 SCQYCNIAFGDAVLYTIHMGYHGFHNPFTCNMC 504
Score = 21.8 bits (44), Expect = 5.8
Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Query: 92 FTCKVCSRSFGYKHVLQNHERTHTGEKP 119
++C+ CS + Y H L+ H R + G P
Sbjct: 287 YSCRDCSYATKYCHSLKIHLRRY-GHTP 313
>DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped
protein.
Length = 126
Score = 57.2 bits (132), Expect = 1e-10
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 92 FTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTH 138
F CK C+R F + L HERTHT E+P+ C C K F R HL+ H
Sbjct: 80 FICKYCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDH 126
Score = 50.8 bits (116), Expect = 1e-08
Identities = 20/50 (40%), Positives = 32/50 (64%)
Query: 117 EKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSCPHCPRHFVQVANLRRH 166
++ F C C+++FT+ ++L H R HT E+PYSC C + F + +LR H
Sbjct: 77 KRQFICKYCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDH 126
Score = 46.8 bits (106), Expect = 2e-07
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 145 EKPYSCPHCPRHFVQVANLRRHLRVHTGERPYACTRCPARFSDSNQLKAH 194
++ + C +C R F + NL H R HT ERPY+C C F + L+ H
Sbjct: 77 KRQFICKYCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDH 126
>L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protein
protein.
Length = 46
Score = 54.0 bits (124), Expect = 1e-09
Identities = 24/46 (52%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 112 RTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSCPHCPRHF 157
RTHT P +C+ C K F+R L+ H+R HTGEKP+SC +C R F
Sbjct: 2 RTHT--LPCKCTICPKAFSRPWLLQGHIRTHTGEKPFSCTYCNRAF 45
Score = 50.4 bits (115), Expect = 1e-08
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 94 CKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRF 129
C +C ++F +LQ H RTHTGEKPF C+ C++ F
Sbjct: 10 CTICPKAFSRPWLLQGHIRTHTGEKPFSCTYCNRAF 45
Score = 46.8 bits (106), Expect = 2e-07
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 139 LRLHTGEKPYSCPHCPRHFVQVANLRRHLRVHTGERPYACTRCPARFS 186
+R HT P C CP+ F + L+ H+R HTGE+P++CT C F+
Sbjct: 1 IRTHT--LPCKCTICPKAFSRPWLLQGHIRTHTGEKPFSCTYCNRAFA 46
Score = 28.3 bits (60), Expect = 0.067
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 167 LRVHTGERPYACTRCPARFSDSNQLKAHALVHEGD 201
+R HT P CT CP FS L+ H H G+
Sbjct: 1 IRTHT--LPCKCTICPKAFSRPWLLQGHIRTHTGE 33
>L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protein
protein.
Length = 69
Score = 52.4 bits (120), Expect = 4e-09
Identities = 23/65 (35%), Positives = 33/65 (50%)
Query: 104 KHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSCPHCPRHFVQVANL 163
KH L+ H R H G KPF+C++C L +H++ H+ YSC C +L
Sbjct: 1 KHHLEYHLRNHAGSKPFQCNKCDYTCVNKSMLNSHMKSHSNVYRYSCRDCSYATKYCHSL 60
Query: 164 RRHLR 168
+ HLR
Sbjct: 61 KIHLR 65
Score = 51.2 bits (117), Expect = 8e-09
Identities = 22/62 (35%), Positives = 30/62 (48%)
Query: 133 HHLKTHLRLHTGEKPYSCPHCPRHFVQVANLRRHLRVHTGERPYACTRCPARFSDSNQLK 192
HHL+ HLR H G KP+ C C V + L H++ H+ Y+C C + LK
Sbjct: 2 HHLEYHLRNHAGSKPFQCNKCDYTCVNKSMLNSHMKSHSNVYRYSCRDCSYATKYCHSLK 61
Query: 193 AH 194
H
Sbjct: 62 IH 63
Score = 35.9 bits (79), Expect = 3e-04
Identities = 16/51 (31%), Positives = 24/51 (47%)
Query: 90 KLFTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLR 140
K F C C + K +L +H ++H+ + C +C H LK HLR
Sbjct: 15 KPFQCNKCDYTCVNKSMLNSHMKSHSNVYRYSCRDCSYATKYCHSLKIHLR 65
Score = 33.1 bits (72), Expect = 0.002
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 162 NLRRHLRVHTGERPYACTRCPARFSDSNQLKAHALVH 198
+L HLR H G +P+ C +C + + L +H H
Sbjct: 3 HLEYHLRNHAGSKPFQCNKCDYTCVNKSMLNSHMKSH 39
Score = 21.4 bits (43), Expect = 7.7
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 92 FTCKVCSRSFGYKHVLQNHERTH 114
++C+ CS + Y H L+ H R +
Sbjct: 45 YSCRDCSYATKYCHSLKIHLRRY 67
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 25.0 bits (52), Expect = 0.62
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 91 LFTCKVCSRSFGYKHVLQNH 110
+ TCKVC ++F L NH
Sbjct: 547 VLTCKVCDQAFSSLKELSNH 566
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.320 0.133 0.447
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,373
Number of Sequences: 317
Number of extensions: 1968
Number of successful extensions: 66
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 37
length of query: 277
length of database: 114,650
effective HSP length: 56
effective length of query: 221
effective length of database: 96,898
effective search space: 21414458
effective search space used: 21414458
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 43 (21.4 bits)
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