Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000905-TA|BGIBMGA000905-PA|IPR007087|Zinc finger,
C2H2-type, IPR007086|Zinc finger, C2H2-subtype
(277 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 92 9e-20
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 73 6e-14
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 68 2e-12
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 64 2e-11
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 62 6e-11
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 57 2e-09
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 52 7e-08
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 50 4e-07
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 49 6e-07
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 48 2e-06
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 45 1e-05
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 42 7e-05
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 31 0.18
SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces... 28 1.3
SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2 |Schizo... 27 2.2
SPAC24H6.02c |||TIM23 translocase complex subunit Tim15|Schizosa... 27 2.2
SPBC2F12.11c |rep2||transcriptional activator Rep2|Schizosacchar... 27 3.0
SPAC6B12.02c |mus7||DNA repair protein Mus7|Schizosaccharomyces ... 27 3.9
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 26 5.2
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 26 5.2
SPCC1682.07 |ssl1||transcription factor TFIIH complex subunit Ss... 26 6.8
SPBC3B9.05 |||helper of TIM |Schizosaccharomyces pombe|chr 2|||M... 25 9.0
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 91.9 bits (218), Expect = 9e-20
Identities = 46/113 (40%), Positives = 62/113 (54%), Gaps = 8/113 (7%)
Query: 90 KLFTC--KVCSRSFGYKHVLQNHERTHTGEKPFEC--SECHKRFTRDHHLKTHLRLHTGE 145
K+F C + C + + +L+ H RTH+ E+PF C + C K F R HLK H R HT
Sbjct: 21 KIFHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNV 80
Query: 146 KPYSCPH--CPRHFVQVANLRRHLRVHTGERPYACT--RCPARFSDSNQLKAH 194
KP+SC + C F +L RH+ VH +PYACT C FS QL++H
Sbjct: 81 KPFSCHYDGCDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSH 133
Score = 48.8 bits (111), Expect = 8e-07
Identities = 39/121 (32%), Positives = 55/121 (45%), Gaps = 15/121 (12%)
Query: 93 TCKVCSRSFGYKHVLQNH-ERTHTGEKPFEC--SEC--HKRFTRDHHLKTHLRLHTGEKP 147
T + C F K LQNH R H + C C H+ F + L+ H+R P
Sbjct: 147 TYQDCELRFATKQKLQNHVNRAHEKIISYSCPHESCVGHEGFEKWSQLQNHIR--EAHVP 204
Query: 148 YSCPHCPRHFVQVANLRRHLRVH----TGERPYACTR--CPARFSDSNQLKAH-ALVHEG 200
SC C R F A+LR H+ +H + Y C C F+ S+ LK H +++HEG
Sbjct: 205 -SCSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEG 263
Query: 201 D 201
+
Sbjct: 264 N 264
Score = 45.2 bits (102), Expect = 1e-05
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Query: 93 TCKVCSRSFG----YKHVLQNHERTHTGEKPFEC--SECHKRFTRDHHLKTHLR-LHTGE 145
+C +C R F +H + H+ T K + C C K FTR LK H+ +H G
Sbjct: 205 SCSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGN 264
Query: 146 KPYSCPHCPRHFVQVANLRRHLRVHTGERPY 176
+ C C F L+RHL T ++ +
Sbjct: 265 MAFHCDSCGTKFGYKHMLQRHLERGTCKKAH 295
Score = 35.1 bits (77), Expect = 0.011
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Query: 90 KLFTCKV--CSRSFGYKHVLQNHERT-HTGEKPFECSECHKRFTRDHHLKTHLRLHTGEK 146
K + C + C +SF L+ H H G F C C +F H L+ HL T +K
Sbjct: 234 KTYHCPMEGCKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRHLERGTCKK 293
Query: 147 PY 148
+
Sbjct: 294 AH 295
Score = 33.5 bits (73), Expect = 0.034
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 6/45 (13%)
Query: 92 FTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLK 136
F C C FGYKH+LQ H T C + HK + + +K
Sbjct: 267 FHCDSCGTKFGYKHMLQRHLERGT------CKKAHKPYINECGIK 305
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 72.5 bits (170), Expect = 6e-14
Identities = 29/77 (37%), Positives = 45/77 (58%)
Query: 97 CSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSCPHCPRH 156
C++ F + L++H THT +PF+CS C K F R H + H +LHTG K ++C C +
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQR 636
Query: 157 FVQVANLRRHLRVHTGE 173
F ++ L RH + G+
Sbjct: 637 FARMDALNRHYKSEVGQ 653
Score = 72.5 bits (170), Expect = 6e-14
Identities = 28/70 (40%), Positives = 44/70 (62%)
Query: 125 CHKRFTRDHHLKTHLRLHTGEKPYSCPHCPRHFVQVANLRRHLRVHTGERPYACTRCPAR 184
C+KRFTR ++LK+H+ HT +P+ C C + F + + RRH ++HTG + +AC C R
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQR 636
Query: 185 FSDSNQLKAH 194
F+ + L H
Sbjct: 637 FARMDALNRH 646
Score = 54.0 bits (124), Expect = 2e-08
Identities = 21/54 (38%), Positives = 30/54 (55%)
Query: 92 FTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGE 145
F C +C +SF +H + HE+ HTG K F C C++RF R L H + G+
Sbjct: 600 FQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRHYKSEVGQ 653
Score = 43.2 bits (97), Expect = 4e-05
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 153 CPRHFVQVANLRRHLRVHTGERPYACTRCPARFSDSNQLKAHALVHEG 200
C + F + NL+ H+ HT RP+ C+ C F+ + + H +H G
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTG 624
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 67.7 bits (158), Expect = 2e-12
Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 125 CHKRFTRDHHLKTHLRLHTGEKPYSCPHCPRHFVQVANLRRHLRVHTGERPYACTRCPAR 184
C+KR R +++++H++ H ++PY C C FV+ +L+RHLR+H RPY C C R
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVC-ECLKR 508
Query: 185 FSDSNQLKAH 194
F+ + L H
Sbjct: 509 FNRLDALNRH 518
Score = 63.3 bits (147), Expect = 4e-11
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 97 CSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSCPHCPRH 156
C++ K+ +++H +TH ++P+ C C F R H LK HLR+H +PY C C +
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVC-ECLKR 508
Query: 157 FVQVANLRRH 166
F ++ L RH
Sbjct: 509 FNRLDALNRH 518
Score = 43.2 bits (97), Expect = 4e-05
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 153 CPRHFVQVANLRRHLRVHTGERPYACTRCPARFSDSNQLKAHALVHE 199
C + + N+ H++ H +RPY C C A F + LK H +HE
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHE 496
Score = 41.1 bits (92), Expect = 2e-04
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 89 DKLFTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTH 138
D+ + C +C F H L+ H R H +P+ C EC KRF R L H
Sbjct: 470 DRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVC-ECLKRFNRLDALNRH 518
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 64.5 bits (150), Expect = 2e-11
Identities = 33/75 (44%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 116 GEKPFECSECHKRFTRDHHLKTHLR-LHTGEKPYSCPHCPRHFVQVANLRRHLRVHTGER 174
G K F C EC K+F R HL+ H+R LHT EKP+ C C + F + NLR+H R+H
Sbjct: 419 GGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNAS 477
Query: 175 P-YACTRCPARFSDS 188
P AC P+ + S
Sbjct: 478 PRLACFFQPSGYYSS 492
Score = 54.4 bits (125), Expect = 2e-08
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 136 KTHLRLHTGEKPYSCPHCPRHFVQVANLRRHLR-VHTGERPYACTRCPARFSDSNQLKAH 194
KT + G K + CP C + F + +LRRH+R +HT E+P+ C C RFS + L+ H
Sbjct: 411 KTSVPRSPGGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVCI-CGKRFSRRDNLRQH 469
Query: 195 ALVH 198
+H
Sbjct: 470 ERLH 473
Score = 54.0 bits (124), Expect = 2e-08
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 90 KLFTCKVCSRSFGYKHVLQNHERT-HTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKP 147
K F C CS+ F L+ H R+ HT EKPF C C KRF+R +L+ H RLH P
Sbjct: 421 KSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVCI-CGKRFSRRDNLRQHERLHVNASP 478
Score = 27.9 bits (59), Expect = 1.7
Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 89 DKLFTCKVCSRSFGYKHVLQNHERTHTGEKP 119
+K F C +C + F + L+ HER H P
Sbjct: 449 EKPFVC-ICGKRFSRRDNLRQHERLHVNASP 478
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 62.5 bits (145), Expect = 6e-11
Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Query: 146 KPYSCPHCPRHFVQVANLRRHLRVHTGERPYACT--RCPARFSDSNQLKAHALVH 198
+PY CP C + F ++ + RH+R HTGE+P+ CT C RFS S++L HA +H
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIH 78
Score = 58.8 bits (136), Expect = 8e-10
Identities = 25/56 (44%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 118 KPFECSECHKRFTRDHHLKTHLRLHTGEKPYSC--PHCPRHFVQVANLRRHLRVHT 171
+P++C C K F R H H+R HTGEKP+ C P C + F + L RH R+HT
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHT 79
Score = 51.2 bits (117), Expect = 2e-07
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 92 FTCKVCSRSFGYKHVLQNHERTHTGEKPFECS--ECHKRFTRDHHLKTHLRLHT 143
+ C +C+++F H RTHTGEKP C+ C KRF+R L H R+HT
Sbjct: 26 YKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHT 79
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 57.2 bits (132), Expect = 2e-09
Identities = 34/86 (39%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 118 KPFECSECHKRFTRDHHLKTHLRLHTGEKPYSC--PHCPRHFVQVANLRRHLRVHTGERP 175
K +EC C + F R H H+R HTGEKP+ C P C + F + L RH+R H R
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTHL--RK 59
Query: 176 YACTRCPARFSDSNQLKAHALVHEGD 201
T P + D N KA EGD
Sbjct: 60 ALVT--PEQTLDVNLHKAPDSKPEGD 83
Score = 56.4 bits (130), Expect = 4e-09
Identities = 27/55 (49%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 90 KLFTCKVCSRSFGYKHVLQNHERTHTGEKPFECS--ECHKRFTRDHHLKTHLRLH 142
K + C C R F + H R+HTGEKPFECS C KRFTR L H+R H
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 52.4 bits (120), Expect = 7e-08
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 120 FECSECHKRFTRDHHLKTHLRLHTGEKPYSCPH--CPRHFVQVANLRRHLRVH 170
+ C+EC + F+R LK H HTGE+P+ C + C + F +N+RRH R+H
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 42.3 bits (95), Expect = 7e-05
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 4/94 (4%)
Query: 109 NHERTHTGEKPFECSECHK--RFTRDHHLKTHLRLHTGEKPYSCPHCPRHFVQVANLRRH 166
N+ H +K S H R H + Y C C + F + ++L+ H
Sbjct: 427 NYSDHHNNDKRAHVSRRHSTSRKIAQSHTGSSSTSSAANVRYRCTECLQGFSRPSSLKIH 486
Query: 167 LRVHTGERPYAC--TRCPARFSDSNQLKAHALVH 198
HTGERP+ C C F+ + ++ H +H
Sbjct: 487 TYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 41.1 bits (92), Expect = 2e-04
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 92 FTCKVCSRSFGYKHVLQNHERTHTGEKPFEC--SECHKRFTRDHHLKTHLRLH 142
+ C C + F L+ H +HTGE+PF C + C K F +++ H R+H
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 27.9 bits (59), Expect = 1.7
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 176 YACTRCPARFSDSNQLKAHALVHEGD 201
Y CT C FS + LK H H G+
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGE 493
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 50.0 bits (114), Expect = 4e-07
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 107 LQNHERTHT-GEKPFECS--ECHKRFTRDHHLKTHLRLHTGEKPYSCPHCPRHFVQVANL 163
L+ R H G+ F C+ +C K FTR HL+ H R H K +SC C R F + L
Sbjct: 12 LKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVL 71
Query: 164 RRHLR 168
RH++
Sbjct: 72 NRHVQ 76
Score = 45.6 bits (103), Expect = 8e-06
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 89 DKLFTCKV--CSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLR 140
D F C C +SF K L+ HERTH K F CS C++ F R L H++
Sbjct: 23 DPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQ 76
Score = 44.8 bits (101), Expect = 1e-05
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 135 LKTHLRLHT-GEKPYSC--PHCPRHFVQVANLRRHLRVHTGERPYACTRCPARFSDSNQL 191
LK R H G+ + C P CP+ F + +LRRH R H + ++C+ C F+ S+ L
Sbjct: 12 LKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVL 71
Query: 192 KAH 194
H
Sbjct: 72 NRH 74
Score = 25.4 bits (53), Expect = 9.0
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Query: 163 LRRHLRVHT-GERPYACTR--CPARFSDSNQLKAHALVHE 199
L++ R H G+ + CT CP F+ L+ H HE
Sbjct: 12 LKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHE 51
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 49.2 bits (112), Expect = 6e-07
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 116 GEKPFECS--ECHKRFTRDHHLKTHLRLHTGEKPYSCPHCPRHFVQVANLRRHL 167
G+ ++C C K FTR H + H R HT K + CPHC F + L RH+
Sbjct: 13 GDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHV 66
Score = 41.5 bits (93), Expect = 1e-04
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 97 CSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHL-RLHTGEKPYSCPHCPR 155
C++SF K + H R+HT K F C C FTR L H+ + H + P+
Sbjct: 24 CTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQKHVKQNDAGSQTHPK 83
Query: 156 H 156
H
Sbjct: 84 H 84
Score = 39.9 bits (89), Expect = 4e-04
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 144 GEKPYSCPH--CPRHFVQVANLRRHLRVHTGERPYACTRCPARFSDSNQLKAH 194
G+ Y C C + F + + RRH R HT + + C C + F+ S+ L H
Sbjct: 13 GDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRH 65
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 47.6 bits (108), Expect = 2e-06
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 8/66 (12%)
Query: 90 KLFTCKVCSRSFGYKHVLQNHERTHTGEKPFECSE-------CHKRFT-RDHHLKTHLRL 141
K + C+ C+R+F L+ H R+HT EKPF CSE C ++F+ RD L+ ++
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQKI 127
Query: 142 HTGEKP 147
H +P
Sbjct: 128 HRNPQP 133
Score = 46.8 bits (106), Expect = 3e-06
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 118 KPFECSECHKRFTRDHHLKTHLRLHTGEKPYSCPH-------CPRHFVQVANLRRH-LRV 169
K + C C + F R HLK H+R HT EKP++C C R F + L RH ++
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQKI 127
Query: 170 HTGERP 175
H +P
Sbjct: 128 HRNPQP 133
Score = 44.0 bits (99), Expect = 2e-05
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 7/56 (12%)
Query: 146 KPYSCPHCPRHFVQVANLRRHLRVHTGERPYAC-------TRCPARFSDSNQLKAH 194
K Y C C R F ++ +L+RH+R HT E+P+ C T C +FS + L H
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRH 123
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 45.2 bits (102), Expect = 1e-05
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 117 EKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSCPHCPRHFVQVANLRRHLR 168
++ F C +C KRFTR +L H H+ +P CP+C + L+RH++
Sbjct: 28 KRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQ 79
Score = 36.3 bits (80), Expect = 0.005
Identities = 16/58 (27%), Positives = 24/58 (41%)
Query: 137 THLRLHTGEKPYSCPHCPRHFVQVANLRRHLRVHTGERPYACTRCPARFSDSNQLKAH 194
T L ++ + C C + F + NL RH H+ P C C + + LK H
Sbjct: 20 TEPSLIDSKRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRH 77
Score = 35.5 bits (78), Expect = 0.008
Identities = 15/57 (26%), Positives = 26/57 (45%)
Query: 90 KLFTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEK 146
++F C C++ F L H+ H+ +P C C + R LK H++ +K
Sbjct: 29 RVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFHNDK 85
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 42.3 bits (95), Expect = 7e-05
Identities = 20/39 (51%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Query: 104 KHVLQNHERTHTGEKPFECS--ECHKRFTRDHHLKTHLR 140
+ L H R+HTGEKPF CS EC + FTR L H+R
Sbjct: 90 RFALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMR 128
Score = 41.1 bits (92), Expect = 2e-04
Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 135 LKTHLRLHTGEKPYSC--PHCPRHFVQVANLRRHLR-VHTGE 173
L HLR HTGEKP+ C P C R F + L +H+R VH +
Sbjct: 93 LVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRTVHEAD 134
Score = 40.7 bits (91), Expect = 2e-04
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 142 HTGEK--PYSCP--HCPRH-FVQVAN--LRRHLRVHTGERPYACT--RCPARFSDSNQLK 192
H G + Y+C CPR VQ + L HLR HTGE+P+ C+ C F+ S+ L
Sbjct: 65 HIGNRRPKYTCEWDDCPRKGMVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALA 124
Query: 193 AH-ALVHEGD 201
H VHE D
Sbjct: 125 KHMRTVHEAD 134
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 31.1 bits (67), Expect = 0.18
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 11/80 (13%)
Query: 117 EKPFECS--ECHKRFTRDHHLKTHLRLHTGEKPYSCPHCPRHFVQVANLRRHLRVHTGER 174
+KP++C C K + + LK H +LH P + P P H +
Sbjct: 347 DKPYKCPVPNCDKAYKNQNGLKYH-KLHGHCSPITTP-TPAPIP-------HQGFVVENK 397
Query: 175 PYACTRCPARFSDSNQLKAH 194
PY C C R+ + N LK H
Sbjct: 398 PYRCEVCSKRYKNLNGLKYH 417
Score = 26.2 bits (55), Expect = 5.2
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 110 HERTHTGEKPFECSECHKRFTRDHHLKTHLRLHT 143
H+ KP+ C C KR+ + LK H R H+
Sbjct: 389 HQGFVVENKPYRCEVCSKRYKNLNGLKYH-RTHS 421
>SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 637
Score = 28.3 bits (60), Expect = 1.3
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 125 CHKRFTRDHHLKTHL-RLHTGEKP-YSCPHC--PRHFVQVANLRRHLRVHTG 172
C+ F+R + L H +H +P + C C RHF + L RHLRV G
Sbjct: 585 CNTVFSRTYDLIRHQDTIHAKTRPVFRCEICGDQRHFSRHDALVRHLRVKHG 636
>SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1513
Score = 27.5 bits (58), Expect = 2.2
Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 88 RDKLFTCKVCSRSFGYKHVLQNHERTHTGEKPFECSEC 125
RD C +C R F Y V N+E + K F C C
Sbjct: 1364 RDSFIDCTICERRFHYDCVGLNNEIADSVSK-FTCPIC 1400
>SPAC24H6.02c |||TIM23 translocase complex subunit
Tim15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 175
Score = 27.5 bits (58), Expect = 2.2
Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
Query: 92 FTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLK 136
FTC VC+ + Q + H G +C +C R HLK
Sbjct: 80 FTCTVCNTRSNHNFSKQAY---HNGTVLVQCPKCKNRHLMADHLK 121
Score = 25.8 bits (54), Expect = 6.8
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 9/56 (16%)
Query: 120 FECSECHKRFTRDHHLKTHLRLHTGEKPYSCPHCP-RHFVQVANLRRHLRVHTGER 174
F C+ C+ TR +H + H G CP C RH + HL++ + ER
Sbjct: 80 FTCTVCN---TRSNHNFSKQAYHNGTVLVQCPKCKNRHL-----MADHLKIFSEER 127
>SPBC2F12.11c |rep2||transcriptional activator
Rep2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 219
Score = 27.1 bits (57), Expect = 3.0
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 94 CKVCSRSFGYKHVLQNHERTHTGEKPFECSE 124
C C+ +F + L HE T + PF+ S+
Sbjct: 177 CSKCNTTFNHSTALMMHEATCLNQVPFKLSD 207
>SPAC6B12.02c |mus7||DNA repair protein Mus7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1888
Score = 26.6 bits (56), Expect = 3.9
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Query: 90 KLFTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYS 149
KLF+ + S + YK + +RTHT +C K DH+++ ++ L++ E+ +
Sbjct: 558 KLFS-SLFSNNVSYKKS-KKLKRTHTVH-----DKCQKVAKLDHYIRDNIELNSKEREHD 610
Query: 150 C 150
C
Sbjct: 611 C 611
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 26.2 bits (55), Expect = 5.2
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 94 CKVCSRSFGYKHVLQNHERTHTGEK 118
C VC+++F ++ L+NHE + +K
Sbjct: 272 CMVCNKNFRSQNQLENHENSKKHKK 296
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 26.2 bits (55), Expect = 5.2
Identities = 13/32 (40%), Positives = 15/32 (46%)
Query: 224 ASAGCEPDTPSPPVATASDWRWDEWPEQTEPE 255
A AG P P PP +A R+ Q EPE
Sbjct: 771 AGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPE 802
>SPCC1682.07 |ssl1||transcription factor TFIIH complex subunit
Ssl1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 421
Score = 25.8 bits (54), Expect = 6.8
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 143 TGEKPYSCPHCPRHFVQVANLRRHLRVH 170
T Y+CP C HF ++ H ++H
Sbjct: 384 TSSMRYACPSCKNHFCLDCDVFAHEQLH 411
>SPBC3B9.05 |||helper of TIM |Schizosaccharomyces pombe|chr
2|||Manual
Length = 116
Score = 25.4 bits (53), Expect = 9.0
Identities = 14/52 (26%), Positives = 19/52 (36%), Gaps = 6/52 (11%)
Query: 107 LQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSCPHCPRHFV 158
+ +H T E C +C K F + E CP+C HFV
Sbjct: 30 IADHPLLKTSELTLICKKCRKAF------RIQFDQTMDESDEYCPNCDNHFV 75
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.320 0.133 0.447
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 976,184
Number of Sequences: 5004
Number of extensions: 33299
Number of successful extensions: 170
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 85
Number of HSP's gapped (non-prelim): 63
length of query: 277
length of database: 2,362,478
effective HSP length: 72
effective length of query: 205
effective length of database: 2,002,190
effective search space: 410448950
effective search space used: 410448950
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 53 (25.4 bits)
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