GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000905-TA|BGIBMGA000905-PA|IPR007087|Zinc finger,
C2H2-type, IPR007086|Zinc finger, C2H2-subtype
         (277 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...   113   5e-27
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    40   6e-05
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    40   6e-05
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    34   0.005
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    33   0.009
CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    32   0.021
AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsi...    27   0.45 
EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.           23   9.6  
EF519368-1|ABP68477.1|  506|Anopheles gambiae LRIM1 protein.           23   9.6  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score =  113 bits (272), Expect = 5e-27
 Identities = 50/107 (46%), Positives = 63/107 (58%), Gaps = 1/107 (0%)

Query: 94  CKVCSRSFGYKHVLQNHER-THTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSCPH 152
           CK C   F     L  H R  HT E+P +C+EC         LK H+R HTGEKP+ CPH
Sbjct: 185 CKHCDNCFTTSGELIRHIRYRHTHERPHKCTECDYASVELSKLKRHIRTHTGEKPFQCPH 244

Query: 153 CPRHFVQVANLRRHLRVHTGERPYACTRCPARFSDSNQLKAHALVHE 199
           C         L RH+R+HTGE+PY+C  C ARF+ SN LKAH ++H+
Sbjct: 245 CTYASPDKFKLTRHMRIHTGEKPYSCDVCFARFTQSNSLKAHKMIHQ 291



 Score =  104 bits (249), Expect = 3e-24
 Identities = 46/114 (40%), Positives = 60/114 (52%), Gaps = 1/114 (0%)

Query: 89  DKLFTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRL-HTGEKP 147
           D+   C VC R F     LQNH  THTG KP  C  C   FT    L  H+R  HT E+P
Sbjct: 152 DRPHKCVVCERGFKTLASLQNHVNTHTGTKPHRCKHCDNCFTTSGELIRHIRYRHTHERP 211

Query: 148 YSCPHCPRHFVQVANLRRHLRVHTGERPYACTRCPARFSDSNQLKAHALVHEGD 201
           + C  C    V+++ L+RH+R HTGE+P+ C  C     D  +L  H  +H G+
Sbjct: 212 HKCTECDYASVELSKLKRHIRTHTGEKPFQCPHCTYASPDKFKLTRHMRIHTGE 265



 Score = 95.9 bits (228), Expect = 1e-21
 Identities = 46/116 (39%), Positives = 63/116 (54%), Gaps = 3/116 (2%)

Query: 89  DKLFTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLH-TGEKP 147
           +K F C  C+ +   K  L  H R HTGEKP+ C  C  RFT+ + LK H  +H  G KP
Sbjct: 237 EKPFQCPHCTYASPDKFKLTRHMRIHTGEKPYSCDVCFARFTQSNSLKAHKMIHQVGNKP 296

Query: 148 -YSCPHCPRHFVQVANLRRHLR-VHTGERPYACTRCPARFSDSNQLKAHALVHEGD 201
            + C  CP    +  +LR H++ +HT ++P  C RC + F D    K HA  HEG+
Sbjct: 297 VFQCKLCPTTCGRKTDLRIHVQNLHTADKPIKCKRCDSTFPDRYSYKMHAKTHEGE 352



 Score = 90.6 bits (215), Expect = 4e-20
 Identities = 38/105 (36%), Positives = 55/105 (52%), Gaps = 1/105 (0%)

Query: 91  LFTCKVCSRSFGYKHVLQNH-ERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYS 149
           +F CK+C  + G K  L+ H +  HT +KP +C  C   F   +  K H + H GEK Y 
Sbjct: 297 VFQCKLCPTTCGRKTDLRIHVQNLHTADKPIKCKRCDSTFPDRYSYKMHAKTHEGEKCYR 356

Query: 150 CPHCPRHFVQVANLRRHLRVHTGERPYACTRCPARFSDSNQLKAH 194
           C +CP   + + +L  HL +HT ++PY C +C   F     LK H
Sbjct: 357 CEYCPYASISMRHLESHLLLHTDQKPYKCDQCAQTFRQKQLLKRH 401



 Score = 88.2 bits (209), Expect = 2e-19
 Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 1/111 (0%)

Query: 92  FTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSCP 151
           + C  C+ +     +L  H +TH+ ++P +C  C + F     L+ H+  HTG KP+ C 
Sbjct: 127 YMCNYCNYTSNKLFLLSRHLKTHSEDRPHKCVVCERGFKTLASLQNHVNTHTGTKPHRCK 186

Query: 152 HCPRHFVQVANLRRHLRV-HTGERPYACTRCPARFSDSNQLKAHALVHEGD 201
           HC   F     L RH+R  HT ERP+ CT C     + ++LK H   H G+
Sbjct: 187 HCDNCFTTSGELIRHIRYRHTHERPHKCTECDYASVELSKLKRHIRTHTGE 237



 Score = 74.9 bits (176), Expect = 2e-15
 Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 3/113 (2%)

Query: 89  DKLFTCKVCSRSFGYKHVLQNHERTH-TGEKP-FECSECHKRFTRDHHLKTHLR-LHTGE 145
           +K ++C VC   F   + L+ H+  H  G KP F+C  C     R   L+ H++ LHT +
Sbjct: 265 EKPYSCDVCFARFTQSNSLKAHKMIHQVGNKPVFQCKLCPTTCGRKTDLRIHVQNLHTAD 324

Query: 146 KPYSCPHCPRHFVQVANLRRHLRVHTGERPYACTRCPARFSDSNQLKAHALVH 198
           KP  C  C   F    + + H + H GE+ Y C  CP        L++H L+H
Sbjct: 325 KPIKCKRCDSTFPDRYSYKMHAKTHEGEKCYRCEYCPYASISMRHLESHLLLH 377



 Score = 74.1 bits (174), Expect = 4e-15
 Identities = 37/120 (30%), Positives = 54/120 (45%), Gaps = 9/120 (7%)

Query: 89  DKLFTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPY 148
           DK   CK C  +F  ++  + H +TH GEK + C  C        HL++HL LHT +KPY
Sbjct: 324 DKPIKCKRCDSTFPDRYSYKMHAKTHEGEKCYRCEYCPYASISMRHLESHLLLHTDQKPY 383

Query: 149 SCPHCPRHFVQVANLRRHLRVHTG---------ERPYACTRCPARFSDSNQLKAHALVHE 199
            C  C + F Q   L+RH+  +            + + C  C   F     L  H  +H+
Sbjct: 384 KCDQCAQTFRQKQLLKRHMNYYHNPDYVAPTPKAKTHICPTCKRPFRHKGNLIRHMAMHD 443



 Score = 54.4 bits (125), Expect = 3e-09
 Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 11/95 (11%)

Query: 89  DKLFTCKVCS-RSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGE-- 145
           +K + C+ C   S   +H L++H   HT +KP++C +C + F +   LK H+  +     
Sbjct: 352 EKCYRCEYCPYASISMRH-LESHLLLHTDQKPYKCDQCAQTFRQKQLLKRHMNYYHNPDY 410

Query: 146 -------KPYSCPHCPRHFVQVANLRRHLRVHTGE 173
                  K + CP C R F    NL RH+ +H  E
Sbjct: 411 VAPTPKAKTHICPTCKRPFRHKGNLIRHMAMHDPE 445


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 40.3 bits (90), Expect = 6e-05
 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 7/73 (9%)

Query: 105 HVLQNHERTHTGEKP---FECSECHKRFTRDHHLKTHLRLHTGEKPYSCPHCPRHFVQVA 161
           H +  H       +P   + C  C K  T   H   H   HT ++   CP+CP  + ++ 
Sbjct: 509 HQMSYHNMFTPSREPGTAWRCRSCGKEVTNRWH---HFHSHTPQRSL-CPYCPASYSRID 564

Query: 162 NLRRHLRVHTGER 174
            LR HLR+   +R
Sbjct: 565 TLRSHLRIKHADR 577



 Score = 36.7 bits (81), Expect = 7e-04
 Identities = 19/76 (25%), Positives = 30/76 (39%), Gaps = 1/76 (1%)

Query: 126 HKRFTRDHHLKTHLRLHTGEKPYSCPHCPRHFVQVANLRRHLRVHTGERPYACTRCPARF 185
           H  +   H +  H       +P +   C     +V N   H   HT +R   C  CPA +
Sbjct: 502 HTHYQLHHQMSYHNMFTPSREPGTAWRCRSCGKEVTNRWHHFHSHTPQRSL-CPYCPASY 560

Query: 186 SDSNQLKAHALVHEGD 201
           S  + L++H  +   D
Sbjct: 561 SRIDTLRSHLRIKHAD 576


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 40.3 bits (90), Expect = 6e-05
 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 7/73 (9%)

Query: 105 HVLQNHERTHTGEKP---FECSECHKRFTRDHHLKTHLRLHTGEKPYSCPHCPRHFVQVA 161
           H +  H       +P   + C  C K  T   H   H   HT ++   CP+CP  + ++ 
Sbjct: 485 HQMSYHNMFTPSREPGTAWRCRSCGKEVTNRWH---HFHSHTPQRSL-CPYCPASYSRID 540

Query: 162 NLRRHLRVHTGER 174
            LR HLR+   +R
Sbjct: 541 TLRSHLRIKHADR 553



 Score = 36.7 bits (81), Expect = 7e-04
 Identities = 19/76 (25%), Positives = 30/76 (39%), Gaps = 1/76 (1%)

Query: 126 HKRFTRDHHLKTHLRLHTGEKPYSCPHCPRHFVQVANLRRHLRVHTGERPYACTRCPARF 185
           H  +   H +  H       +P +   C     +V N   H   HT +R   C  CPA +
Sbjct: 478 HTHYQLHHQMSYHNMFTPSREPGTAWRCRSCGKEVTNRWHHFHSHTPQRSL-CPYCPASY 536

Query: 186 SDSNQLKAHALVHEGD 201
           S  + L++H  +   D
Sbjct: 537 SRIDTLRSHLRIKHAD 552


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 33.9 bits (74), Expect = 0.005
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 4/50 (8%)

Query: 91  LFTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLR 140
           L  CK+C +   +   ++NH   H   + FEC  C   +TR  +L+TH +
Sbjct: 499 LHRCKLCGKVVTH---IRNHYHVHFPGR-FECPLCRATYTRSDNLRTHCK 544



 Score = 31.5 bits (68), Expect = 0.027
 Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 4/64 (6%)

Query: 105 HVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTGEKPYSCPHCPRHFVQVANLR 164
           H+    ER   G     C  C K  T   H++ H  +H   + + CP C   + +  NLR
Sbjct: 485 HMRLTFERLSGGCNLHRCKLCGKVVT---HIRNHYHVHFPGR-FECPLCRATYTRSDNLR 540

Query: 165 RHLR 168
            H +
Sbjct: 541 THCK 544


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 33.1 bits (72), Expect = 0.009
 Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 6/57 (10%)

Query: 115 TGEKP--FECSECHKRFTRDHHLKTHLRLHTGEKPYSCPHCPRHFVQVANLRRHLRV 169
           TG  P  + C  CHK  +   H   H  +H  +  + CP C + F +  N++ H +V
Sbjct: 892 TGTFPTLYSCVSCHKTVSNRWH---HANIHRPQS-HECPVCGQKFTRRDNMKAHCKV 944



 Score = 28.3 bits (60), Expect = 0.25
 Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 4/51 (7%)

Query: 91  LFTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRL 141
           L++C  C ++   +    +H   H  +   EC  C ++FTR  ++K H ++
Sbjct: 898 LYSCVSCHKTVSNRW---HHANIHRPQS-HECPVCGQKFTRRDNMKAHCKV 944


>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 31.9 bits (69), Expect = 0.021
 Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 4/53 (7%)

Query: 92  FTCKVCSRSFGYKHVLQNHE----RTHTGEKPFECSECHKRFTRDHHLKTHLR 140
           F C +C  S+  K   Q HE    R        +C+ CHK F++    + H+R
Sbjct: 349 FQCNLCDMSYRTKLQYQKHEYEVHRISNENFGIKCTICHKLFSQRQDYQLHMR 401



 Score = 24.2 bits (50), Expect = 4.2
 Identities = 9/24 (37%), Positives = 11/24 (45%)

Query: 143 TGEKPYSCPHCPRHFVQVANLRRH 166
           T    Y CP C   FV++ N   H
Sbjct: 287 TNHHLYRCPACGNLFVELTNFYNH 310


>AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsive
           serine proteaselike protein protein.
          Length = 600

 Score = 27.5 bits (58), Expect = 0.45
 Identities = 14/39 (35%), Positives = 20/39 (51%)

Query: 232 TPSPPVATASDWRWDEWPEQTEPEDLSLPRRPATPDSPT 270
           T +  + T+ D +  E    +EP  L +P RP TPD  T
Sbjct: 192 TTANSLGTSLDAQSIEGTGASEPTKLPIPLRPITPDQQT 230


>EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.
          Length = 493

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 3/32 (9%)

Query: 169 VHTGERPYACTRCPARFSD---SNQLKAHALV 197
           +H    PY C   PA F+D   + + K HAL+
Sbjct: 309 MHNHYGPYCCEDLPAPFADRLIALKRKEHALL 340


>EF519368-1|ABP68477.1|  506|Anopheles gambiae LRIM1 protein.
          Length = 506

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 3/32 (9%)

Query: 169 VHTGERPYACTRCPARFSD---SNQLKAHALV 197
           +H    PY C   PA F+D   + + K HAL+
Sbjct: 309 MHNHYGPYCCEDLPAPFADRLIALKRKEHALL 340


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.133    0.447 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 241,695
Number of Sequences: 2123
Number of extensions: 8699
Number of successful extensions: 55
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 20
Number of HSP's gapped (non-prelim): 24
length of query: 277
length of database: 516,269
effective HSP length: 63
effective length of query: 214
effective length of database: 382,520
effective search space: 81859280
effective search space used: 81859280
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 47 (23.0 bits)