Silkworm BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000904-TA|BGIBMGA000904-PA|IPR008979|Galactose-binding
like, IPR012919|Sad1/UNC-like, C-terminal
         (235 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-234|AAF57400.2|  564|Drosophila melanogaster CG18584-PA...   136   2e-32
EF537040-1|ABQ08586.1|  304|Drosophila melanogaster sperm-associ...    58   8e-09
BT029929-1|ABM92803.1|  221|Drosophila melanogaster IP10153p pro...    58   8e-09
AE014134-2084|AAF53110.1|  273|Drosophila melanogaster CG6589-PA...    53   3e-07

>AE013599-234|AAF57400.2|  564|Drosophila melanogaster CG18584-PA
           protein.
          Length = 564

 Score =  136 bits (330), Expect = 2e-32
 Identities = 82/197 (41%), Positives = 108/197 (54%), Gaps = 9/197 (4%)

Query: 23  EPSLRKNSRQALDNYDYDRQ-VADYALESAGGRILDTGDTIEHLVYESPIS-WGLHLITS 80
           E  +R+  +  L  YD D+  + D+ALESAGG+IL T  T  +    + IS +G+ L   
Sbjct: 369 EEEVRQIVKTVLAIYDADKTGLVDFALESAGGQILSTRCTESYQTKSAQISVFGIPL--- 425

Query: 81  WMCRECQGASAMIRPGTLPGECWAFKGSKG-QAMIRLLGTVKVMGVSVEHIPAHISPTRE 139
           W        +  I P   PGECWAF+G  G     RL   V V G ++EHIP  +SPT  
Sbjct: 426 WYPTNTPRVA--ISPNVQPGECWAFQGFPGFLGKSRLNSLVYVTGFTLEHIPKSLSPTGR 483

Query: 140 ISSAPRLFQVEGLEYRSDPYPHDFGTVEYDKEGKPIQYFEVLYPSTK-GYSLIRIRVLTN 198
           I SAPR F V GLE   D  P  FG  +++  G  +QYF V     K  Y ++ +R+ TN
Sbjct: 484 IESAPRNFTVWGLEQEKDQEPVLFGDYQFEDNGASLQYFAVQNLDIKRPYEIVELRIETN 543

Query: 199 WGHPVYTCVYRVRVHGE 215
            GHP YTC+YR RVHG+
Sbjct: 544 HGHPTYTCLYRFRVHGK 560


>EF537040-1|ABQ08586.1|  304|Drosophila melanogaster
           sperm-associated SUN domain proteinprotein.
          Length = 304

 Score = 58.4 bits (135), Expect = 8e-09
 Identities = 41/127 (32%), Positives = 61/127 (48%), Gaps = 7/127 (5%)

Query: 92  MIRPGTLPGECWAFKGSKGQAMIRLLGTVKVMGVSVEHIPAHISPTREISSAPRLFQVEG 151
           MIR G  PG C+ F GS+    + L  T+ V  +++ H+   ++P   + SAP+ F V G
Sbjct: 183 MIRTGLSPGSCFGFNGSRATVTLHLARTIIVEAITLTHVAREMTPDLCVKSAPKNFDVYG 242

Query: 152 LEYRSDPYPHD-FGTVEYDK-EGKPIQYFEVLYPSTKGYSLIRIRVLTNWGHPVYTCVYR 209
           L  RS+    +  G   YD    K  Q + V   S   +  +     +N G    TC+YR
Sbjct: 243 L--RSENSKRELLGQWSYDNAANKRTQSYSV--RSDTFFRNLDFSFNSNHG-ANSTCIYR 297

Query: 210 VRVHGEL 216
           V V+G L
Sbjct: 298 VEVYGRL 304


>BT029929-1|ABM92803.1|  221|Drosophila melanogaster IP10153p
           protein.
          Length = 221

 Score = 58.4 bits (135), Expect = 8e-09
 Identities = 41/127 (32%), Positives = 61/127 (48%), Gaps = 7/127 (5%)

Query: 92  MIRPGTLPGECWAFKGSKGQAMIRLLGTVKVMGVSVEHIPAHISPTREISSAPRLFQVEG 151
           MIR G  PG C+ F GS+    + L  T+ V  +++ H+   ++P   + SAP+ F V G
Sbjct: 100 MIRTGLSPGSCFGFNGSRATVTLHLARTIIVEAITLTHVAREMTPDLCVKSAPKNFDVYG 159

Query: 152 LEYRSDPYPHD-FGTVEYDK-EGKPIQYFEVLYPSTKGYSLIRIRVLTNWGHPVYTCVYR 209
           L  RS+    +  G   YD    K  Q + V   S   +  +     +N G    TC+YR
Sbjct: 160 L--RSENSKRELLGQWSYDNAANKRTQSYSV--RSDTFFRNLDFSFNSNHG-ANSTCIYR 214

Query: 210 VRVHGEL 216
           V V+G L
Sbjct: 215 VEVYGRL 221


>AE014134-2084|AAF53110.1|  273|Drosophila melanogaster CG6589-PA
           protein.
          Length = 273

 Score = 53.2 bits (122), Expect = 3e-07
 Identities = 40/127 (31%), Positives = 61/127 (48%), Gaps = 9/127 (7%)

Query: 92  MIRPGTLPGECWAFKGSKGQAMIRLLGTVKVMGVSVEHIPAHISPTREISSAPRLFQVEG 151
           MIR G  PG C+ F GS+    + L  T+ V  +++ H+   ++P   + SAP+ F  +G
Sbjct: 154 MIRTGLSPGSCFGFNGSRATVTLHLARTIIVEAITLTHVAREMTPDLCVKSAPKNF--DG 211

Query: 152 LEYRSDPYPHD-FGTVEYDK-EGKPIQYFEVLYPSTKGYSLIRIRVLTNWGHPVYTCVYR 209
           L  RS+    +  G   YD    K  Q + V   S   +  +     +N G    TC+YR
Sbjct: 212 L--RSENSKRELLGQWSYDNAANKRTQSYSV--RSDTFFRNLDFSFNSNHG-ANSTCIYR 266

Query: 210 VRVHGEL 216
           V V+G L
Sbjct: 267 VEVYGRL 273


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.319    0.136    0.422 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,412,427
Number of Sequences: 52641
Number of extensions: 479434
Number of successful extensions: 726
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 716
Number of HSP's gapped (non-prelim): 4
length of query: 235
length of database: 24,830,863
effective HSP length: 83
effective length of query: 152
effective length of database: 20,461,660
effective search space: 3110172320
effective search space used: 3110172320
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 60 (28.3 bits)