GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000904-TA|BGIBMGA000904-PA|IPR008979|Galactose-binding
like, IPR012919|Sad1/UNC-like, C-terminal
         (235 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    24   4.5  
AJ271117-1|CAB88872.1|  355|Anopheles gambiae serine protease pr...    23   7.8  

>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)

Query: 101 ECWAFKGSKGQAMIRLLGTVKVMGVSV 127
           E W   G  GQ  I LL TV+ +G+S+
Sbjct: 192 EEWG-SGRNGQRGIELLQTVETLGLSI 217


>AJ271117-1|CAB88872.1|  355|Anopheles gambiae serine protease
           protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 16/50 (32%), Positives = 24/50 (48%)

Query: 50  SAGGRILDTGDTIEHLVYESPISWGLHLITSWMCRECQGASAMIRPGTLP 99
           SAG   L+    + H  Y++  +   + I     R+  G+S MIRP  LP
Sbjct: 181 SAGPIDLEIESFVAHAGYDAADTAHTNDIALIRLRQDVGSSEMIRPICLP 230


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.136    0.422 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 241,441
Number of Sequences: 2123
Number of extensions: 9650
Number of successful extensions: 12
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 2
length of query: 235
length of database: 516,269
effective HSP length: 62
effective length of query: 173
effective length of database: 384,643
effective search space: 66543239
effective search space used: 66543239
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 47 (23.0 bits)