GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000903-TA|BGIBMGA000903-PA|IPR000717|Proteasome
component region PCI
         (386 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    23   4.9  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    23   4.9  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    23   4.9  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    23   4.9  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    23   4.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   6.5  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   8.5  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   8.5  

>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 9/28 (32%), Positives = 15/28 (53%)

Query: 57  PSESDIEAILNSIVSIMVSIPLERGENL 84
           PS+  +E  + S  S   S+P++  E L
Sbjct: 511 PSDVTVETSIRSTASFWDSLPIKENEKL 538


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 9/28 (32%), Positives = 15/28 (53%)

Query: 57  PSESDIEAILNSIVSIMVSIPLERGENL 84
           PS+  +E  + S  S   S+P++  E L
Sbjct: 511 PSDVTVETSIRSTASFWDSLPIKENEKL 538


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 9/28 (32%), Positives = 15/28 (53%)

Query: 57  PSESDIEAILNSIVSIMVSIPLERGENL 84
           PS+  +E  + S  S   S+P++  E L
Sbjct: 511 PSDVTVETSIRSTASFWDSLPIKENEKL 538


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 9/28 (32%), Positives = 15/28 (53%)

Query: 57  PSESDIEAILNSIVSIMVSIPLERGENL 84
           PS+  +E  + S  S   S+P++  E L
Sbjct: 511 PSDVTVETSIRSTASFWDSLPIKENEKL 538


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 9/28 (32%), Positives = 15/28 (53%)

Query: 57  PSESDIEAILNSIVSIMVSIPLERGENL 84
           PS+  +E  + S  S   S+P++  E L
Sbjct: 511 PSDVTVETSIRSTASFWDSLPIKENEKL 538


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)

Query: 47   VGVCDACFKEPSESDIE 63
            V VCDAC+    E +++
Sbjct: 1373 VAVCDACYSTIEEKNLQ 1389


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 9/28 (32%), Positives = 19/28 (67%), Gaps = 1/28 (3%)

Query: 40  EDDLHKIVGVCDACFKEPSESDIEAILN 67
           E+ +H++V   +  ++ PSE D++ I+N
Sbjct: 316 EELIHRLVYFQNE-YEHPSEEDVKRIIN 342


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 12/57 (21%), Positives = 27/57 (47%)

Query: 20  RRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSESDIEAILNSIVSIMVSI 76
           RR       +++ EKS   + DD +++  +C    ++ S   + + LN+   I+  +
Sbjct: 248 RRIAAVASEKVTSEKSWIALNDDYNRLCHLCFLLDEKLSYIILTSFLNNFYFIIFQV 304


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.320    0.134    0.381 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,660
Number of Sequences: 317
Number of extensions: 3275
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 8
length of query: 386
length of database: 114,650
effective HSP length: 58
effective length of query: 328
effective length of database: 96,264
effective search space: 31574592
effective search space used: 31574592
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 44 (21.8 bits)