GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000903-TA|BGIBMGA000903-PA|IPR000717|Proteasome
component region PCI
         (386 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    28   0.38 
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             25   2.7  
AJ973474-1|CAJ01521.1|  191|Anopheles gambiae hypothetical prote...    24   8.1  
AJ697734-1|CAG26927.1|  191|Anopheles gambiae putative chemosens...    24   8.1  

>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 28.3 bits (60), Expect = 0.38
 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 2/75 (2%)

Query: 299 ISELQIEEKDVEAFVIEVL-KTRLVRARMDQAQRTVRVSNTMHRTFGREQWQQLRDVLLA 357
           IS+L +E K  E  V +   K   +   ++ AQ  +R  N   RT   E+  +LR+ L  
Sbjct: 916 ISKLTVEIKTSERNVQKSKDKINSMEDEVEAAQSAIRKGND-ERTQLEEEANKLREELEE 974

Query: 358 WRANVHQAHEAMKSV 372
            +  + +AHE   S+
Sbjct: 975 MKLAIEKAHEGSSSI 989


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 25.4 bits (53), Expect = 2.7
 Identities = 10/30 (33%), Positives = 20/30 (66%)

Query: 252 SYQTFYNNHKEFVHSQGLNHEQNIKKMRIL 281
           +Y+  ++  KEFV SQG++ +Q + +  I+
Sbjct: 334 NYKISFDAVKEFVDSQGISQKQILPRKEII 363


>AJ973474-1|CAJ01521.1|  191|Anopheles gambiae hypothetical protein
           protein.
          Length = 191

 Score = 23.8 bits (49), Expect = 8.1
 Identities = 11/49 (22%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 305 EEKDVEAFVIEVLKTRLVRARMDQAQRTVRVSNTMHRTFGREQWQQLRD 353
           E KD++  + E L+T+  R    Q +  +++   ++  +  +Q++ LR+
Sbjct: 63  EGKDLKRILPEALRTKCARCSPIQKENALKIITRLYYDY-PDQYRALRE 110


>AJ697734-1|CAG26927.1|  191|Anopheles gambiae putative chemosensory
           protein CSP5 protein.
          Length = 191

 Score = 23.8 bits (49), Expect = 8.1
 Identities = 11/49 (22%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 305 EEKDVEAFVIEVLKTRLVRARMDQAQRTVRVSNTMHRTFGREQWQQLRD 353
           E KD++  + E L+T+  R    Q +  +++   ++  +  +Q++ LR+
Sbjct: 63  EGKDLKRILPEALRTKCARCSPIQKENALKIITRLYYDY-PDQYRALRE 110


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.134    0.381 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 353,076
Number of Sequences: 2123
Number of extensions: 13301
Number of successful extensions: 24
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 23
Number of HSP's gapped (non-prelim): 4
length of query: 386
length of database: 516,269
effective HSP length: 65
effective length of query: 321
effective length of database: 378,274
effective search space: 121425954
effective search space used: 121425954
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 49 (23.8 bits)