BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA000903-TA|BGIBMGA000903-PA|IPR000717|Proteasome component region PCI (386 letters) Database: fruitfly 52,641 sequences; 24,830,863 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY118924-1|AAM50784.1| 387|Drosophila melanogaster LD23767p pro... 545 e-155 AE013599-1830|AAF58289.1| 387|Drosophila melanogaster CG8309-PA... 545 e-155 AY061232-1|AAL28780.1| 382|Drosophila melanogaster LD17530p pro... 41 0.003 AF145311-1|AAF08392.1| 382|Drosophila melanogaster 26S proteaso... 41 0.003 AE014297-3373|AAF56174.1| 382|Drosophila melanogaster CG10230-P... 41 0.003 AE014297-3372|AAF56173.1| 382|Drosophila melanogaster CG10230-P... 41 0.003 AF067207-1|AAD10630.1| 1023|Drosophila melanogaster CLOCK protein. 34 0.29 AF065133-1|AAC39101.1| 1015|Drosophila melanogaster CLOCK protein. 34 0.29 AF069997-1|AAC62234.1| 1027|Drosophila melanogaster CLOCK protein. 32 1.2 AE014296-1322|AAX52754.1| 961|Drosophila melanogaster CG7391-PF... 32 1.2 AE014296-1321|AAX52753.1| 1027|Drosophila melanogaster CG7391-PD... 32 1.2 AE014296-1320|AAS65057.1| 1027|Drosophila melanogaster CG7391-PC... 32 1.2 AE014296-1319|AAN12019.1| 1023|Drosophila melanogaster CG7391-PB... 32 1.2 AE014296-1318|AAF50516.1| 1023|Drosophila melanogaster CG7391-PA... 32 1.2 BT024259-1|ABC86321.1| 119|Drosophila melanogaster IP15827p pro... 32 1.5 AY094791-1|AAM11144.1| 830|Drosophila melanogaster LD20292p pro... 31 2.0 AY069836-1|AAL39981.1| 444|Drosophila melanogaster SD08021p pro... 31 2.0 AF129079-1|AAD28604.1| 444|Drosophila melanogaster COP9 signalo... 31 2.0 AE014296-3765|AAN11410.1| 830|Drosophila melanogaster CG32350-P... 31 2.0 AE014134-1594|AAF52736.1| 444|Drosophila melanogaster CG9556-PB... 31 2.0 AE014134-1593|AAN10685.1| 444|Drosophila melanogaster CG9556-PA... 31 2.0 BT015203-1|AAT94432.1| 841|Drosophila melanogaster RE65032p pro... 29 8.2 AF517634-1|AAM77747.1| 4876|Drosophila melanogaster BIR-containi... 29 8.2 AE014297-1135|AAF54520.3| 4876|Drosophila melanogaster CG6303-PA... 29 8.2 AE013599-3356|AAF46817.3| 631|Drosophila melanogaster CG5625-PB... 29 8.2 AE013599-3355|AAF46816.3| 612|Drosophila melanogaster CG5625-PA... 29 8.2 >AY118924-1|AAM50784.1| 387|Drosophila melanogaster LD23767p protein. Length = 387 Score = 545 bits (1346), Expect = e-155 Identities = 250/372 (67%), Positives = 312/372 (83%) Query: 1 MQGPAVFMDISLEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSES 60 M VF+D+SL++Q ELR+YFK LGAEIS EKS KG+EDDLHKI+GVCD CFK+ S Sbjct: 1 MTSHPVFIDLSLDEQVQELRKYFKKLGAEISSEKSNKGVEDDLHKIIGVCDVCFKDGEPS 60 Query: 61 DIEAILNSIVSIMVSIPLERGENLILAFSQRLTKAPGPKLGMVALQSLWRLYNNLEPNSP 120 I+ ILNSIVSIM++IPL+RGEN++LA+ +++TKAP LG V LQSLWRL+NNL+ SP Sbjct: 61 QIDGILNSIVSIMITIPLDRGENIVLAYCEKMTKAPNLPLGKVCLQSLWRLFNNLDTASP 120 Query: 121 LRYHVYYHVIELAARVGFVREVFTGVEQLRKEFANCPPSNEQMQKLYRLLHQVLKDQNSE 180 LRYHVYYH++++A + V EVF+GV+QL+ +FANCPPS+EQMQKLYRLLH V KD N E Sbjct: 121 LRYHVYYHLVQVAKQCEQVLEVFSGVDQLKSQFANCPPSSEQMQKLYRLLHDVTKDTNLE 180 Query: 181 LAAKVMIELLGTYTDENASYAREDAIKCIATALADPNTFLLDPLLTLKPVRFLEGELIHD 240 L++KVMIELLGTYT +NA AREDA+KCI TALADPNTFLLDPLL+LKPVRFLEG+LIHD Sbjct: 181 LSSKVMIELLGTYTADNACVAREDAMKCIVTALADPNTFLLDPLLSLKPVRFLEGDLIHD 240 Query: 241 LLTIFVSEKLSSYQTFYNNHKEFVHSQGLNHEQNIKKMRILSFMQMAETNPDLTFDEIIS 300 LL+IFVSEKL +Y FY +H+EFV+SQGLNHEQN+KKMR+L+FMQ+AE++P++TF+ + Sbjct: 241 LLSIFVSEKLPAYVQFYEDHREFVNSQGLNHEQNMKKMRLLTFMQLAESSPEMTFETLTK 300 Query: 301 ELQIEEKDVEAFVIEVLKTRLVRARMDQAQRTVRVSNTMHRTFGREQWQQLRDVLLAWRA 360 ELQI E +VE FVIEVLKT+LVRAR+DQA + V +S+TMHRTFG QW+QLRD+L AW+ Sbjct: 301 ELQINEDEVEPFVIEVLKTKLVRARLDQANQKVHISSTMHRTFGAPQWEQLRDLLQAWKE 360 Query: 361 NVHQAHEAMKSV 372 N+ E + SV Sbjct: 361 NLSTVREGLTSV 372 >AE013599-1830|AAF58289.1| 387|Drosophila melanogaster CG8309-PA protein. Length = 387 Score = 545 bits (1346), Expect = e-155 Identities = 250/372 (67%), Positives = 312/372 (83%) Query: 1 MQGPAVFMDISLEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSES 60 M VF+D+SL++Q ELR+YFK LGAEIS EKS KG+EDDLHKI+GVCD CFK+ S Sbjct: 1 MTSHPVFIDLSLDEQVQELRKYFKKLGAEISSEKSNKGVEDDLHKIIGVCDVCFKDGEPS 60 Query: 61 DIEAILNSIVSIMVSIPLERGENLILAFSQRLTKAPGPKLGMVALQSLWRLYNNLEPNSP 120 I+ ILNSIVSIM++IPL+RGEN++LA+ +++TKAP LG V LQSLWRL+NNL+ SP Sbjct: 61 QIDGILNSIVSIMITIPLDRGENIVLAYCEKMTKAPNLPLGKVCLQSLWRLFNNLDTASP 120 Query: 121 LRYHVYYHVIELAARVGFVREVFTGVEQLRKEFANCPPSNEQMQKLYRLLHQVLKDQNSE 180 LRYHVYYH++++A + V EVF+GV+QL+ +FANCPPS+EQMQKLYRLLH V KD N E Sbjct: 121 LRYHVYYHLVQVAKQCEQVLEVFSGVDQLKSQFANCPPSSEQMQKLYRLLHDVTKDTNLE 180 Query: 181 LAAKVMIELLGTYTDENASYAREDAIKCIATALADPNTFLLDPLLTLKPVRFLEGELIHD 240 L++KVMIELLGTYT +NA AREDA+KCI TALADPNTFLLDPLL+LKPVRFLEG+LIHD Sbjct: 181 LSSKVMIELLGTYTADNACVAREDAMKCIVTALADPNTFLLDPLLSLKPVRFLEGDLIHD 240 Query: 241 LLTIFVSEKLSSYQTFYNNHKEFVHSQGLNHEQNIKKMRILSFMQMAETNPDLTFDEIIS 300 LL+IFVSEKL +Y FY +H+EFV+SQGLNHEQN+KKMR+L+FMQ+AE++P++TF+ + Sbjct: 241 LLSIFVSEKLPAYVQFYEDHREFVNSQGLNHEQNMKKMRLLTFMQLAESSPEMTFETLTK 300 Query: 301 ELQIEEKDVEAFVIEVLKTRLVRARMDQAQRTVRVSNTMHRTFGREQWQQLRDVLLAWRA 360 ELQI E +VE FVIEVLKT+LVRAR+DQA + V +S+TMHRTFG QW+QLRD+L AW+ Sbjct: 301 ELQINEDEVEPFVIEVLKTKLVRARLDQANQKVHISSTMHRTFGAPQWEQLRDLLQAWKE 360 Query: 361 NVHQAHEAMKSV 372 N+ E + SV Sbjct: 361 NLSTVREGLTSV 372 >AY061232-1|AAL28780.1| 382|Drosophila melanogaster LD17530p protein. Length = 382 Score = 40.7 bits (91), Expect = 0.003 Identities = 39/193 (20%), Positives = 81/193 (41%), Gaps = 9/193 (4%) Query: 187 IELLGTYTDE--NASYAREDAIKCIATALADPNTFLLDPLLT---LKPVRFLEGELIHDL 241 ++ LG DE +A++ +A L D + + LL L+ ++ E E + +L Sbjct: 183 LQFLGCSMDEYPRDQWAQQAFFLGLAALLGD-GVYNIGELLAHPILESLKGTENEWLMEL 241 Query: 242 LTIFVSEKLSSYQTFYNNHKEF--VHSQGLNHEQNIKKMRILSF-MQMAETNPDLTFDEI 298 L F + ++ + + + +Q + Q I + ++ + + ++F +I Sbjct: 242 LKAFNTGDINKFNDMKKIWSKIPDLAAQEVKLRQKISLLCLMEMTFKRSAIERAISFTDI 301 Query: 299 ISELQIEEKDVEAFVIEVLKTRLVRARMDQAQRTVRVSNTMHRTFGREQWQQLRDVLLAW 358 E ++ K+VE +++ L LVR +DQ V +S R R Q + L W Sbjct: 302 AQETKLPAKEVELLIMKALALDLVRGEIDQVAGVVNMSWVQPRVLNRSQIVGMASTLDTW 361 Query: 359 RANVHQAHEAMKS 371 + + M++ Sbjct: 362 MGAITNMEKLMEN 374 >AF145311-1|AAF08392.1| 382|Drosophila melanogaster 26S proteasome regulatory complexsubunit p39A protein. Length = 382 Score = 40.7 bits (91), Expect = 0.003 Identities = 39/193 (20%), Positives = 81/193 (41%), Gaps = 9/193 (4%) Query: 187 IELLGTYTDE--NASYAREDAIKCIATALADPNTFLLDPLLT---LKPVRFLEGELIHDL 241 ++ LG DE +A++ +A L D + + LL L+ ++ E E + +L Sbjct: 183 LQFLGCSMDEYPRDQWAQQAFFLGLAALLGD-GVYNIGELLAHPILESLKGTENEWLMEL 241 Query: 242 LTIFVSEKLSSYQTFYNNHKEF--VHSQGLNHEQNIKKMRILSF-MQMAETNPDLTFDEI 298 L F + ++ + + + +Q + Q I + ++ + + ++F +I Sbjct: 242 LKAFNTGDINKFNDMKKIWSKIPDLAAQEVKLRQKISLLCLMEMTFKRSAIERAISFTDI 301 Query: 299 ISELQIEEKDVEAFVIEVLKTRLVRARMDQAQRTVRVSNTMHRTFGREQWQQLRDVLLAW 358 E ++ K+VE +++ L LVR +DQ V +S R R Q + L W Sbjct: 302 AQETKLPAKEVELLIMKALALDLVRGEIDQVAGVVNMSWVQPRVLNRSQIVGMASTLDTW 361 Query: 359 RANVHQAHEAMKS 371 + + M++ Sbjct: 362 MGAITNMEKLMEN 374 >AE014297-3373|AAF56174.1| 382|Drosophila melanogaster CG10230-PB, isoform B protein. Length = 382 Score = 40.7 bits (91), Expect = 0.003 Identities = 39/193 (20%), Positives = 81/193 (41%), Gaps = 9/193 (4%) Query: 187 IELLGTYTDE--NASYAREDAIKCIATALADPNTFLLDPLLT---LKPVRFLEGELIHDL 241 ++ LG DE +A++ +A L D + + LL L+ ++ E E + +L Sbjct: 183 LQFLGCSMDEYPRDQWAQQAFFLGLAALLGD-GVYNIGELLAHPILESLKGTENEWLMEL 241 Query: 242 LTIFVSEKLSSYQTFYNNHKEF--VHSQGLNHEQNIKKMRILSF-MQMAETNPDLTFDEI 298 L F + ++ + + + +Q + Q I + ++ + + ++F +I Sbjct: 242 LKAFNTGDINKFNDMKKIWSKIPDLAAQEVKLRQKISLLCLMEMTFKRSAIERAISFTDI 301 Query: 299 ISELQIEEKDVEAFVIEVLKTRLVRARMDQAQRTVRVSNTMHRTFGREQWQQLRDVLLAW 358 E ++ K+VE +++ L LVR +DQ V +S R R Q + L W Sbjct: 302 AQETKLPAKEVELLIMKALALDLVRGEIDQVAGVVNMSWVQPRVLNRSQIVGMASTLDTW 361 Query: 359 RANVHQAHEAMKS 371 + + M++ Sbjct: 362 MGAITNMEKLMEN 374 >AE014297-3372|AAF56173.1| 382|Drosophila melanogaster CG10230-PA, isoform A protein. Length = 382 Score = 40.7 bits (91), Expect = 0.003 Identities = 39/193 (20%), Positives = 81/193 (41%), Gaps = 9/193 (4%) Query: 187 IELLGTYTDE--NASYAREDAIKCIATALADPNTFLLDPLLT---LKPVRFLEGELIHDL 241 ++ LG DE +A++ +A L D + + LL L+ ++ E E + +L Sbjct: 183 LQFLGCSMDEYPRDQWAQQAFFLGLAALLGD-GVYNIGELLAHPILESLKGTENEWLMEL 241 Query: 242 LTIFVSEKLSSYQTFYNNHKEF--VHSQGLNHEQNIKKMRILSF-MQMAETNPDLTFDEI 298 L F + ++ + + + +Q + Q I + ++ + + ++F +I Sbjct: 242 LKAFNTGDINKFNDMKKIWSKIPDLAAQEVKLRQKISLLCLMEMTFKRSAIERAISFTDI 301 Query: 299 ISELQIEEKDVEAFVIEVLKTRLVRARMDQAQRTVRVSNTMHRTFGREQWQQLRDVLLAW 358 E ++ K+VE +++ L LVR +DQ V +S R R Q + L W Sbjct: 302 AQETKLPAKEVELLIMKALALDLVRGEIDQVAGVVNMSWVQPRVLNRSQIVGMASTLDTW 361 Query: 359 RANVHQAHEAMKS 371 + + M++ Sbjct: 362 MGAITNMEKLMEN 374 >AF067207-1|AAD10630.1| 1023|Drosophila melanogaster CLOCK protein. Length = 1023 Score = 34.3 bits (75), Expect = 0.29 Identities = 28/114 (24%), Positives = 53/114 (46%), Gaps = 3/114 (2%) Query: 221 LDPLLTLKPVRFLEGELIHDLLTIFVSEKLSSYQ--TFYNNHKEFVHSQGLNHEQNIKKM 278 +D L L P+ L + + + SY + NN + +++ N QN + Sbjct: 848 IDAFLNLSPLHSLGSQSTINPFNSSSNNNNQSYNGGSNLNNGNQNNNNRSSNPPQNNNED 907 Query: 279 RILSFMQMA-ETNPDLTFDEIISELQIEEKDVEAFVIEVLKTRLVRARMDQAQR 331 +LS+MQMA E++P + F IS+ E + + ++ + LV+ + Q Q+ Sbjct: 908 SLLSYMQMATESSPSINFHMGISDDGSETQSEDNKMMHTSGSNLVQQQQQQQQQ 961 >AF065133-1|AAC39101.1| 1015|Drosophila melanogaster CLOCK protein. Length = 1015 Score = 34.3 bits (75), Expect = 0.29 Identities = 28/114 (24%), Positives = 53/114 (46%), Gaps = 3/114 (2%) Query: 221 LDPLLTLKPVRFLEGELIHDLLTIFVSEKLSSYQ--TFYNNHKEFVHSQGLNHEQNIKKM 278 +D L L P+ L + + + SY + NN + +++ N QN + Sbjct: 840 IDAFLNLSPLHSLGSQSTINPFNSSSNNNNQSYNGGSNLNNGNQNNNNRSSNPPQNNNED 899 Query: 279 RILSFMQMA-ETNPDLTFDEIISELQIEEKDVEAFVIEVLKTRLVRARMDQAQR 331 +LS+MQMA E++P + F IS+ E + + ++ + LV+ + Q Q+ Sbjct: 900 SLLSYMQMATESSPSINFHMGISDDGSETQSEDNKMMHTSGSNLVQQQQQQQQQ 953 >AF069997-1|AAC62234.1| 1027|Drosophila melanogaster CLOCK protein. Length = 1027 Score = 32.3 bits (70), Expect = 1.2 Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 3/114 (2%) Query: 221 LDPLLTLKPVRFLEGELIHDLLTIFVSEKLSSYQ--TFYNNHKEFVHSQGLNHEQNIKKM 278 +D L L P+ L + + + SY + NN + +++ N QN + Sbjct: 852 IDAFLNLSPLHSLGSQSTINPFNSSSNNNNQSYNGGSNLNNGNQNNNNRSSNPPQNNNED 911 Query: 279 RILSFMQMA-ETNPDLTFDEIISELQIEEKDVEAFVIEVLKTRLVRARMDQAQR 331 +LS MQMA E++P + F IS+ E + + ++ + LV+ + Q Q+ Sbjct: 912 SLLSCMQMATESSPSINFHMGISDDGSETQSEDNKMMHTSGSNLVQQQQQQQQQ 965 >AE014296-1322|AAX52754.1| 961|Drosophila melanogaster CG7391-PF, isoform F protein. Length = 961 Score = 32.3 bits (70), Expect = 1.2 Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 3/114 (2%) Query: 221 LDPLLTLKPVRFLEGELIHDLLTIFVSEKLSSYQ--TFYNNHKEFVHSQGLNHEQNIKKM 278 +D L L P+ L + + + SY + NN + +++ N QN + Sbjct: 786 IDAFLNLSPLHSLGSQSTINPFNSSSNNNNQSYNGGSNLNNGNQNNNNRSSNPPQNNNED 845 Query: 279 RILSFMQMA-ETNPDLTFDEIISELQIEEKDVEAFVIEVLKTRLVRARMDQAQR 331 +LS MQMA E++P + F IS+ E + + ++ + LV+ + Q Q+ Sbjct: 846 SLLSCMQMATESSPSINFHMGISDDGSETQSEDNKMMHTSGSNLVQQQQQQQQQ 899 >AE014296-1321|AAX52753.1| 1027|Drosophila melanogaster CG7391-PD, isoform D protein. Length = 1027 Score = 32.3 bits (70), Expect = 1.2 Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 3/114 (2%) Query: 221 LDPLLTLKPVRFLEGELIHDLLTIFVSEKLSSYQ--TFYNNHKEFVHSQGLNHEQNIKKM 278 +D L L P+ L + + + SY + NN + +++ N QN + Sbjct: 852 IDAFLNLSPLHSLGSQSTINPFNSSSNNNNQSYNGGSNLNNGNQNNNNRSSNPPQNNNED 911 Query: 279 RILSFMQMA-ETNPDLTFDEIISELQIEEKDVEAFVIEVLKTRLVRARMDQAQR 331 +LS MQMA E++P + F IS+ E + + ++ + LV+ + Q Q+ Sbjct: 912 SLLSCMQMATESSPSINFHMGISDDGSETQSEDNKMMHTSGSNLVQQQQQQQQQ 965 >AE014296-1320|AAS65057.1| 1027|Drosophila melanogaster CG7391-PC, isoform C protein. Length = 1027 Score = 32.3 bits (70), Expect = 1.2 Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 3/114 (2%) Query: 221 LDPLLTLKPVRFLEGELIHDLLTIFVSEKLSSYQ--TFYNNHKEFVHSQGLNHEQNIKKM 278 +D L L P+ L + + + SY + NN + +++ N QN + Sbjct: 852 IDAFLNLSPLHSLGSQSTINPFNSSSNNNNQSYNGGSNLNNGNQNNNNRSSNPPQNNNED 911 Query: 279 RILSFMQMA-ETNPDLTFDEIISELQIEEKDVEAFVIEVLKTRLVRARMDQAQR 331 +LS MQMA E++P + F IS+ E + + ++ + LV+ + Q Q+ Sbjct: 912 SLLSCMQMATESSPSINFHMGISDDGSETQSEDNKMMHTSGSNLVQQQQQQQQQ 965 >AE014296-1319|AAN12019.1| 1023|Drosophila melanogaster CG7391-PB, isoform B protein. Length = 1023 Score = 32.3 bits (70), Expect = 1.2 Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 3/114 (2%) Query: 221 LDPLLTLKPVRFLEGELIHDLLTIFVSEKLSSYQ--TFYNNHKEFVHSQGLNHEQNIKKM 278 +D L L P+ L + + + SY + NN + +++ N QN + Sbjct: 848 IDAFLNLSPLHSLGSQSTINPFNSSSNNNNQSYNGGSNLNNGNQNNNNRSSNPPQNNNED 907 Query: 279 RILSFMQMA-ETNPDLTFDEIISELQIEEKDVEAFVIEVLKTRLVRARMDQAQR 331 +LS MQMA E++P + F IS+ E + + ++ + LV+ + Q Q+ Sbjct: 908 SLLSCMQMATESSPSINFHMGISDDGSETQSEDNKMMHTSGSNLVQQQQQQQQQ 961 >AE014296-1318|AAF50516.1| 1023|Drosophila melanogaster CG7391-PA, isoform A protein. Length = 1023 Score = 32.3 bits (70), Expect = 1.2 Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 3/114 (2%) Query: 221 LDPLLTLKPVRFLEGELIHDLLTIFVSEKLSSYQ--TFYNNHKEFVHSQGLNHEQNIKKM 278 +D L L P+ L + + + SY + NN + +++ N QN + Sbjct: 848 IDAFLNLSPLHSLGSQSTINPFNSSSNNNNQSYNGGSNLNNGNQNNNNRSSNPPQNNNED 907 Query: 279 RILSFMQMA-ETNPDLTFDEIISELQIEEKDVEAFVIEVLKTRLVRARMDQAQR 331 +LS MQMA E++P + F IS+ E + + ++ + LV+ + Q Q+ Sbjct: 908 SLLSCMQMATESSPSINFHMGISDDGSETQSEDNKMMHTSGSNLVQQQQQQQQQ 961 >BT024259-1|ABC86321.1| 119|Drosophila melanogaster IP15827p protein. Length = 119 Score = 31.9 bits (69), Expect = 1.5 Identities = 17/65 (26%), Positives = 28/65 (43%) Query: 307 KDVEAFVIEVLKTRLVRARMDQAQRTVRVSNTMHRTFGREQWQQLRDVLLAWRANVHQAH 366 K+VE +++ L LVR +DQ V +S R R Q + L W + Sbjct: 47 KEVELLIMKALALDLVRGEIDQVAGVVNMSWVQPRVLNRSQIVGMASTLDTWMGAITNME 106 Query: 367 EAMKS 371 + M++ Sbjct: 107 KLMEN 111 >AY094791-1|AAM11144.1| 830|Drosophila melanogaster LD20292p protein. Length = 830 Score = 31.5 bits (68), Expect = 2.0 Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 9/143 (6%) Query: 149 LRKEFANCPPSNEQMQKLYRLLHQVLKDQNSELAAKVMIELLGTYTDENASYAREDAIKC 208 L K + C PSN+ + LLHQ+L+ + LA + L T EN ++ I Sbjct: 486 LSKMYFACTPSNQVPVEEEHLLHQLLEYGPASLAVD-LTTYLNNITFENVKESKN--ILS 542 Query: 209 IATALADPNTF---LLDPLLTLKPVRFLEGELIHDLLTIFVSEKLSSYQTFYNNHKEFVH 265 + LAD N + +L ++ PV E L + L+ F +L + + + +F+ Sbjct: 543 FCSILADHNDYCAKMLAKIIEAFPV-CDEKLLFYLLVFYFKLWRLDKVTSSFVS--DFIK 599 Query: 266 SQGLNHEQNIKKMRILSFMQMAE 288 + L ++ I R+ +F + + Sbjct: 600 THSLRMDKTIIVSRLYTFFNVTQ 622 >AY069836-1|AAL39981.1| 444|Drosophila melanogaster SD08021p protein. Length = 444 Score = 31.5 bits (68), Expect = 2.0 Identities = 18/115 (15%), Positives = 54/115 (46%), Gaps = 6/115 (5%) Query: 240 DLLTIFVSEKLSSYQTFYNNHKEFVHSQGL--NH-EQNIKKMRILSFMQMAETNPDLTFD 296 +L+ + + ++ ++T H+ + + H E ++ +R +++ ++ Sbjct: 314 NLVNSYQNNDINEFETILRQHRSNIMADQFIREHIEDLLRNIRTQVLIKLIRPYKNIAIP 373 Query: 297 EIISELQIEEKDVEAFVIEVLKTRLVRARMDQAQRTV---RVSNTMHRTFGREQW 348 I + L IE +VE+ ++ + ++ R+DQ + + +++++ R E+W Sbjct: 374 FIANALNIEPAEVESLLVSCILDDTIKGRIDQVNQVLQLDKINSSASRYNALEKW 428 >AF129079-1|AAD28604.1| 444|Drosophila melanogaster COP9 signalosome subunit 2 CSN2 protein. Length = 444 Score = 31.5 bits (68), Expect = 2.0 Identities = 18/115 (15%), Positives = 54/115 (46%), Gaps = 6/115 (5%) Query: 240 DLLTIFVSEKLSSYQTFYNNHKEFVHSQGL--NH-EQNIKKMRILSFMQMAETNPDLTFD 296 +L+ + + ++ ++T H+ + + H E ++ +R +++ ++ Sbjct: 314 NLVNSYQNNDINEFETILRQHRSNIMADQFIREHIEDLLRNIRTQVLIKLIRPYKNIAIP 373 Query: 297 EIISELQIEEKDVEAFVIEVLKTRLVRARMDQAQRTV---RVSNTMHRTFGREQW 348 I + L IE +VE+ ++ + ++ R+DQ + + +++++ R E+W Sbjct: 374 FIANALNIEPAEVESLLVSCILDDTIKGRIDQVNQVLQLDKINSSASRYNALEKW 428 >AE014296-3765|AAN11410.1| 830|Drosophila melanogaster CG32350-PA protein. Length = 830 Score = 31.5 bits (68), Expect = 2.0 Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 9/143 (6%) Query: 149 LRKEFANCPPSNEQMQKLYRLLHQVLKDQNSELAAKVMIELLGTYTDENASYAREDAIKC 208 L K + C PSN+ + LLHQ+L+ + LA + L T EN ++ I Sbjct: 486 LSKMYFACTPSNQVPVEEEHLLHQLLEYGPASLAVD-LTTYLNNITFENVKESKN--ILS 542 Query: 209 IATALADPNTF---LLDPLLTLKPVRFLEGELIHDLLTIFVSEKLSSYQTFYNNHKEFVH 265 + LAD N + +L ++ PV E L + L+ F +L + + + +F+ Sbjct: 543 FCSILADHNDYCAKMLAKIIEAFPV-CDEKLLFYLLVFYFKLWRLDKVTSSFVS--DFIK 599 Query: 266 SQGLNHEQNIKKMRILSFMQMAE 288 + L ++ I R+ +F + + Sbjct: 600 THSLRMDKTIIVSRLYTFFNVTQ 622 >AE014134-1594|AAF52736.1| 444|Drosophila melanogaster CG9556-PB, isoform B protein. Length = 444 Score = 31.5 bits (68), Expect = 2.0 Identities = 18/115 (15%), Positives = 54/115 (46%), Gaps = 6/115 (5%) Query: 240 DLLTIFVSEKLSSYQTFYNNHKEFVHSQGL--NH-EQNIKKMRILSFMQMAETNPDLTFD 296 +L+ + + ++ ++T H+ + + H E ++ +R +++ ++ Sbjct: 314 NLVNSYQNNDINEFETILRQHRSNIMADQFIREHIEDLLRNIRTQVLIKLIRPYKNIAIP 373 Query: 297 EIISELQIEEKDVEAFVIEVLKTRLVRARMDQAQRTV---RVSNTMHRTFGREQW 348 I + L IE +VE+ ++ + ++ R+DQ + + +++++ R E+W Sbjct: 374 FIANALNIEPAEVESLLVSCILDDTIKGRIDQVNQVLQLDKINSSASRYNALEKW 428 >AE014134-1593|AAN10685.1| 444|Drosophila melanogaster CG9556-PA, isoform A protein. Length = 444 Score = 31.5 bits (68), Expect = 2.0 Identities = 18/115 (15%), Positives = 54/115 (46%), Gaps = 6/115 (5%) Query: 240 DLLTIFVSEKLSSYQTFYNNHKEFVHSQGL--NH-EQNIKKMRILSFMQMAETNPDLTFD 296 +L+ + + ++ ++T H+ + + H E ++ +R +++ ++ Sbjct: 314 NLVNSYQNNDINEFETILRQHRSNIMADQFIREHIEDLLRNIRTQVLIKLIRPYKNIAIP 373 Query: 297 EIISELQIEEKDVEAFVIEVLKTRLVRARMDQAQRTV---RVSNTMHRTFGREQW 348 I + L IE +VE+ ++ + ++ R+DQ + + +++++ R E+W Sbjct: 374 FIANALNIEPAEVESLLVSCILDDTIKGRIDQVNQVLQLDKINSSASRYNALEKW 428 >BT015203-1|AAT94432.1| 841|Drosophila melanogaster RE65032p protein. Length = 841 Score = 29.5 bits (63), Expect = 8.2 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Query: 204 DAIKCIATALADPNTFLLDPLLTLKPVRFLEGELIHDLLTIFVSEKLSSYQTFY 257 D++KC +T L + T +L P + + EL H L +++SEK+ Y Sbjct: 77 DSLKCASTMLGELRTSVLSPKSYYELYMAVTNELCH--LELYLSEKIDKKTDLY 128 >AF517634-1|AAM77747.1| 4876|Drosophila melanogaster BIR-containing ubiquitin-conjugatingenzyme protein. Length = 4876 Score = 29.5 bits (63), Expect = 8.2 Identities = 11/26 (42%), Positives = 20/26 (76%) Query: 16 ALELRRYFKSLGAEISEEKSPKGIED 41 ++ LRR+++ L E+S+ K P+G+ED Sbjct: 4753 SMVLRRHYRHLREELSKLKPPRGLED 4778 >AE014297-1135|AAF54520.3| 4876|Drosophila melanogaster CG6303-PA protein. Length = 4876 Score = 29.5 bits (63), Expect = 8.2 Identities = 11/26 (42%), Positives = 20/26 (76%) Query: 16 ALELRRYFKSLGAEISEEKSPKGIED 41 ++ LRR+++ L E+S+ K P+G+ED Sbjct: 4753 SMVLRRHYRHLREELSKLKPPRGLED 4778 >AE013599-3356|AAF46817.3| 631|Drosophila melanogaster CG5625-PB, isoform B protein. Length = 631 Score = 29.5 bits (63), Expect = 8.2 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Query: 204 DAIKCIATALADPNTFLLDPLLTLKPVRFLEGELIHDLLTIFVSEKLSSYQTFY 257 D++KC +T L + T +L P + + EL H L +++SEK+ Y Sbjct: 58 DSLKCASTMLGELRTSVLSPKSYYELYMAVTNELCH--LELYLSEKIDKKTDLY 109 >AE013599-3355|AAF46816.3| 612|Drosophila melanogaster CG5625-PA, isoform A protein. Length = 612 Score = 29.5 bits (63), Expect = 8.2 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Query: 204 DAIKCIATALADPNTFLLDPLLTLKPVRFLEGELIHDLLTIFVSEKLSSYQTFY 257 D++KC +T L + T +L P + + EL H L +++SEK+ Y Sbjct: 39 DSLKCASTMLGELRTSVLSPKSYYELYMAVTNELCH--LELYLSEKIDKKTDLY 90 Database: fruitfly Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 24,830,863 Number of sequences in database: 52,641 Lambda K H 0.320 0.134 0.381 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,932,080 Number of Sequences: 52641 Number of extensions: 672782 Number of successful extensions: 1823 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 17 Number of HSP's that attempted gapping in prelim test: 1810 Number of HSP's gapped (non-prelim): 30 length of query: 386 length of database: 24,830,863 effective HSP length: 86 effective length of query: 300 effective length of database: 20,303,737 effective search space: 6091121100 effective search space used: 6091121100 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.8 bits) S2: 63 (29.5 bits)
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