Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000903-TA|BGIBMGA000903-PA|IPR000717|Proteasome
component region PCI
(386 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118924-1|AAM50784.1| 387|Drosophila melanogaster LD23767p pro... 545 e-155
AE013599-1830|AAF58289.1| 387|Drosophila melanogaster CG8309-PA... 545 e-155
AY061232-1|AAL28780.1| 382|Drosophila melanogaster LD17530p pro... 41 0.003
AF145311-1|AAF08392.1| 382|Drosophila melanogaster 26S proteaso... 41 0.003
AE014297-3373|AAF56174.1| 382|Drosophila melanogaster CG10230-P... 41 0.003
AE014297-3372|AAF56173.1| 382|Drosophila melanogaster CG10230-P... 41 0.003
AF067207-1|AAD10630.1| 1023|Drosophila melanogaster CLOCK protein. 34 0.29
AF065133-1|AAC39101.1| 1015|Drosophila melanogaster CLOCK protein. 34 0.29
AF069997-1|AAC62234.1| 1027|Drosophila melanogaster CLOCK protein. 32 1.2
AE014296-1322|AAX52754.1| 961|Drosophila melanogaster CG7391-PF... 32 1.2
AE014296-1321|AAX52753.1| 1027|Drosophila melanogaster CG7391-PD... 32 1.2
AE014296-1320|AAS65057.1| 1027|Drosophila melanogaster CG7391-PC... 32 1.2
AE014296-1319|AAN12019.1| 1023|Drosophila melanogaster CG7391-PB... 32 1.2
AE014296-1318|AAF50516.1| 1023|Drosophila melanogaster CG7391-PA... 32 1.2
BT024259-1|ABC86321.1| 119|Drosophila melanogaster IP15827p pro... 32 1.5
AY094791-1|AAM11144.1| 830|Drosophila melanogaster LD20292p pro... 31 2.0
AY069836-1|AAL39981.1| 444|Drosophila melanogaster SD08021p pro... 31 2.0
AF129079-1|AAD28604.1| 444|Drosophila melanogaster COP9 signalo... 31 2.0
AE014296-3765|AAN11410.1| 830|Drosophila melanogaster CG32350-P... 31 2.0
AE014134-1594|AAF52736.1| 444|Drosophila melanogaster CG9556-PB... 31 2.0
AE014134-1593|AAN10685.1| 444|Drosophila melanogaster CG9556-PA... 31 2.0
BT015203-1|AAT94432.1| 841|Drosophila melanogaster RE65032p pro... 29 8.2
AF517634-1|AAM77747.1| 4876|Drosophila melanogaster BIR-containi... 29 8.2
AE014297-1135|AAF54520.3| 4876|Drosophila melanogaster CG6303-PA... 29 8.2
AE013599-3356|AAF46817.3| 631|Drosophila melanogaster CG5625-PB... 29 8.2
AE013599-3355|AAF46816.3| 612|Drosophila melanogaster CG5625-PA... 29 8.2
>AY118924-1|AAM50784.1| 387|Drosophila melanogaster LD23767p
protein.
Length = 387
Score = 545 bits (1346), Expect = e-155
Identities = 250/372 (67%), Positives = 312/372 (83%)
Query: 1 MQGPAVFMDISLEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSES 60
M VF+D+SL++Q ELR+YFK LGAEIS EKS KG+EDDLHKI+GVCD CFK+ S
Sbjct: 1 MTSHPVFIDLSLDEQVQELRKYFKKLGAEISSEKSNKGVEDDLHKIIGVCDVCFKDGEPS 60
Query: 61 DIEAILNSIVSIMVSIPLERGENLILAFSQRLTKAPGPKLGMVALQSLWRLYNNLEPNSP 120
I+ ILNSIVSIM++IPL+RGEN++LA+ +++TKAP LG V LQSLWRL+NNL+ SP
Sbjct: 61 QIDGILNSIVSIMITIPLDRGENIVLAYCEKMTKAPNLPLGKVCLQSLWRLFNNLDTASP 120
Query: 121 LRYHVYYHVIELAARVGFVREVFTGVEQLRKEFANCPPSNEQMQKLYRLLHQVLKDQNSE 180
LRYHVYYH++++A + V EVF+GV+QL+ +FANCPPS+EQMQKLYRLLH V KD N E
Sbjct: 121 LRYHVYYHLVQVAKQCEQVLEVFSGVDQLKSQFANCPPSSEQMQKLYRLLHDVTKDTNLE 180
Query: 181 LAAKVMIELLGTYTDENASYAREDAIKCIATALADPNTFLLDPLLTLKPVRFLEGELIHD 240
L++KVMIELLGTYT +NA AREDA+KCI TALADPNTFLLDPLL+LKPVRFLEG+LIHD
Sbjct: 181 LSSKVMIELLGTYTADNACVAREDAMKCIVTALADPNTFLLDPLLSLKPVRFLEGDLIHD 240
Query: 241 LLTIFVSEKLSSYQTFYNNHKEFVHSQGLNHEQNIKKMRILSFMQMAETNPDLTFDEIIS 300
LL+IFVSEKL +Y FY +H+EFV+SQGLNHEQN+KKMR+L+FMQ+AE++P++TF+ +
Sbjct: 241 LLSIFVSEKLPAYVQFYEDHREFVNSQGLNHEQNMKKMRLLTFMQLAESSPEMTFETLTK 300
Query: 301 ELQIEEKDVEAFVIEVLKTRLVRARMDQAQRTVRVSNTMHRTFGREQWQQLRDVLLAWRA 360
ELQI E +VE FVIEVLKT+LVRAR+DQA + V +S+TMHRTFG QW+QLRD+L AW+
Sbjct: 301 ELQINEDEVEPFVIEVLKTKLVRARLDQANQKVHISSTMHRTFGAPQWEQLRDLLQAWKE 360
Query: 361 NVHQAHEAMKSV 372
N+ E + SV
Sbjct: 361 NLSTVREGLTSV 372
>AE013599-1830|AAF58289.1| 387|Drosophila melanogaster CG8309-PA
protein.
Length = 387
Score = 545 bits (1346), Expect = e-155
Identities = 250/372 (67%), Positives = 312/372 (83%)
Query: 1 MQGPAVFMDISLEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSES 60
M VF+D+SL++Q ELR+YFK LGAEIS EKS KG+EDDLHKI+GVCD CFK+ S
Sbjct: 1 MTSHPVFIDLSLDEQVQELRKYFKKLGAEISSEKSNKGVEDDLHKIIGVCDVCFKDGEPS 60
Query: 61 DIEAILNSIVSIMVSIPLERGENLILAFSQRLTKAPGPKLGMVALQSLWRLYNNLEPNSP 120
I+ ILNSIVSIM++IPL+RGEN++LA+ +++TKAP LG V LQSLWRL+NNL+ SP
Sbjct: 61 QIDGILNSIVSIMITIPLDRGENIVLAYCEKMTKAPNLPLGKVCLQSLWRLFNNLDTASP 120
Query: 121 LRYHVYYHVIELAARVGFVREVFTGVEQLRKEFANCPPSNEQMQKLYRLLHQVLKDQNSE 180
LRYHVYYH++++A + V EVF+GV+QL+ +FANCPPS+EQMQKLYRLLH V KD N E
Sbjct: 121 LRYHVYYHLVQVAKQCEQVLEVFSGVDQLKSQFANCPPSSEQMQKLYRLLHDVTKDTNLE 180
Query: 181 LAAKVMIELLGTYTDENASYAREDAIKCIATALADPNTFLLDPLLTLKPVRFLEGELIHD 240
L++KVMIELLGTYT +NA AREDA+KCI TALADPNTFLLDPLL+LKPVRFLEG+LIHD
Sbjct: 181 LSSKVMIELLGTYTADNACVAREDAMKCIVTALADPNTFLLDPLLSLKPVRFLEGDLIHD 240
Query: 241 LLTIFVSEKLSSYQTFYNNHKEFVHSQGLNHEQNIKKMRILSFMQMAETNPDLTFDEIIS 300
LL+IFVSEKL +Y FY +H+EFV+SQGLNHEQN+KKMR+L+FMQ+AE++P++TF+ +
Sbjct: 241 LLSIFVSEKLPAYVQFYEDHREFVNSQGLNHEQNMKKMRLLTFMQLAESSPEMTFETLTK 300
Query: 301 ELQIEEKDVEAFVIEVLKTRLVRARMDQAQRTVRVSNTMHRTFGREQWQQLRDVLLAWRA 360
ELQI E +VE FVIEVLKT+LVRAR+DQA + V +S+TMHRTFG QW+QLRD+L AW+
Sbjct: 301 ELQINEDEVEPFVIEVLKTKLVRARLDQANQKVHISSTMHRTFGAPQWEQLRDLLQAWKE 360
Query: 361 NVHQAHEAMKSV 372
N+ E + SV
Sbjct: 361 NLSTVREGLTSV 372
>AY061232-1|AAL28780.1| 382|Drosophila melanogaster LD17530p
protein.
Length = 382
Score = 40.7 bits (91), Expect = 0.003
Identities = 39/193 (20%), Positives = 81/193 (41%), Gaps = 9/193 (4%)
Query: 187 IELLGTYTDE--NASYAREDAIKCIATALADPNTFLLDPLLT---LKPVRFLEGELIHDL 241
++ LG DE +A++ +A L D + + LL L+ ++ E E + +L
Sbjct: 183 LQFLGCSMDEYPRDQWAQQAFFLGLAALLGD-GVYNIGELLAHPILESLKGTENEWLMEL 241
Query: 242 LTIFVSEKLSSYQTFYNNHKEF--VHSQGLNHEQNIKKMRILSF-MQMAETNPDLTFDEI 298
L F + ++ + + + +Q + Q I + ++ + + ++F +I
Sbjct: 242 LKAFNTGDINKFNDMKKIWSKIPDLAAQEVKLRQKISLLCLMEMTFKRSAIERAISFTDI 301
Query: 299 ISELQIEEKDVEAFVIEVLKTRLVRARMDQAQRTVRVSNTMHRTFGREQWQQLRDVLLAW 358
E ++ K+VE +++ L LVR +DQ V +S R R Q + L W
Sbjct: 302 AQETKLPAKEVELLIMKALALDLVRGEIDQVAGVVNMSWVQPRVLNRSQIVGMASTLDTW 361
Query: 359 RANVHQAHEAMKS 371
+ + M++
Sbjct: 362 MGAITNMEKLMEN 374
>AF145311-1|AAF08392.1| 382|Drosophila melanogaster 26S proteasome
regulatory complexsubunit p39A protein.
Length = 382
Score = 40.7 bits (91), Expect = 0.003
Identities = 39/193 (20%), Positives = 81/193 (41%), Gaps = 9/193 (4%)
Query: 187 IELLGTYTDE--NASYAREDAIKCIATALADPNTFLLDPLLT---LKPVRFLEGELIHDL 241
++ LG DE +A++ +A L D + + LL L+ ++ E E + +L
Sbjct: 183 LQFLGCSMDEYPRDQWAQQAFFLGLAALLGD-GVYNIGELLAHPILESLKGTENEWLMEL 241
Query: 242 LTIFVSEKLSSYQTFYNNHKEF--VHSQGLNHEQNIKKMRILSF-MQMAETNPDLTFDEI 298
L F + ++ + + + +Q + Q I + ++ + + ++F +I
Sbjct: 242 LKAFNTGDINKFNDMKKIWSKIPDLAAQEVKLRQKISLLCLMEMTFKRSAIERAISFTDI 301
Query: 299 ISELQIEEKDVEAFVIEVLKTRLVRARMDQAQRTVRVSNTMHRTFGREQWQQLRDVLLAW 358
E ++ K+VE +++ L LVR +DQ V +S R R Q + L W
Sbjct: 302 AQETKLPAKEVELLIMKALALDLVRGEIDQVAGVVNMSWVQPRVLNRSQIVGMASTLDTW 361
Query: 359 RANVHQAHEAMKS 371
+ + M++
Sbjct: 362 MGAITNMEKLMEN 374
>AE014297-3373|AAF56174.1| 382|Drosophila melanogaster CG10230-PB,
isoform B protein.
Length = 382
Score = 40.7 bits (91), Expect = 0.003
Identities = 39/193 (20%), Positives = 81/193 (41%), Gaps = 9/193 (4%)
Query: 187 IELLGTYTDE--NASYAREDAIKCIATALADPNTFLLDPLLT---LKPVRFLEGELIHDL 241
++ LG DE +A++ +A L D + + LL L+ ++ E E + +L
Sbjct: 183 LQFLGCSMDEYPRDQWAQQAFFLGLAALLGD-GVYNIGELLAHPILESLKGTENEWLMEL 241
Query: 242 LTIFVSEKLSSYQTFYNNHKEF--VHSQGLNHEQNIKKMRILSF-MQMAETNPDLTFDEI 298
L F + ++ + + + +Q + Q I + ++ + + ++F +I
Sbjct: 242 LKAFNTGDINKFNDMKKIWSKIPDLAAQEVKLRQKISLLCLMEMTFKRSAIERAISFTDI 301
Query: 299 ISELQIEEKDVEAFVIEVLKTRLVRARMDQAQRTVRVSNTMHRTFGREQWQQLRDVLLAW 358
E ++ K+VE +++ L LVR +DQ V +S R R Q + L W
Sbjct: 302 AQETKLPAKEVELLIMKALALDLVRGEIDQVAGVVNMSWVQPRVLNRSQIVGMASTLDTW 361
Query: 359 RANVHQAHEAMKS 371
+ + M++
Sbjct: 362 MGAITNMEKLMEN 374
>AE014297-3372|AAF56173.1| 382|Drosophila melanogaster CG10230-PA,
isoform A protein.
Length = 382
Score = 40.7 bits (91), Expect = 0.003
Identities = 39/193 (20%), Positives = 81/193 (41%), Gaps = 9/193 (4%)
Query: 187 IELLGTYTDE--NASYAREDAIKCIATALADPNTFLLDPLLT---LKPVRFLEGELIHDL 241
++ LG DE +A++ +A L D + + LL L+ ++ E E + +L
Sbjct: 183 LQFLGCSMDEYPRDQWAQQAFFLGLAALLGD-GVYNIGELLAHPILESLKGTENEWLMEL 241
Query: 242 LTIFVSEKLSSYQTFYNNHKEF--VHSQGLNHEQNIKKMRILSF-MQMAETNPDLTFDEI 298
L F + ++ + + + +Q + Q I + ++ + + ++F +I
Sbjct: 242 LKAFNTGDINKFNDMKKIWSKIPDLAAQEVKLRQKISLLCLMEMTFKRSAIERAISFTDI 301
Query: 299 ISELQIEEKDVEAFVIEVLKTRLVRARMDQAQRTVRVSNTMHRTFGREQWQQLRDVLLAW 358
E ++ K+VE +++ L LVR +DQ V +S R R Q + L W
Sbjct: 302 AQETKLPAKEVELLIMKALALDLVRGEIDQVAGVVNMSWVQPRVLNRSQIVGMASTLDTW 361
Query: 359 RANVHQAHEAMKS 371
+ + M++
Sbjct: 362 MGAITNMEKLMEN 374
>AF067207-1|AAD10630.1| 1023|Drosophila melanogaster CLOCK protein.
Length = 1023
Score = 34.3 bits (75), Expect = 0.29
Identities = 28/114 (24%), Positives = 53/114 (46%), Gaps = 3/114 (2%)
Query: 221 LDPLLTLKPVRFLEGELIHDLLTIFVSEKLSSYQ--TFYNNHKEFVHSQGLNHEQNIKKM 278
+D L L P+ L + + + SY + NN + +++ N QN +
Sbjct: 848 IDAFLNLSPLHSLGSQSTINPFNSSSNNNNQSYNGGSNLNNGNQNNNNRSSNPPQNNNED 907
Query: 279 RILSFMQMA-ETNPDLTFDEIISELQIEEKDVEAFVIEVLKTRLVRARMDQAQR 331
+LS+MQMA E++P + F IS+ E + + ++ + LV+ + Q Q+
Sbjct: 908 SLLSYMQMATESSPSINFHMGISDDGSETQSEDNKMMHTSGSNLVQQQQQQQQQ 961
>AF065133-1|AAC39101.1| 1015|Drosophila melanogaster CLOCK protein.
Length = 1015
Score = 34.3 bits (75), Expect = 0.29
Identities = 28/114 (24%), Positives = 53/114 (46%), Gaps = 3/114 (2%)
Query: 221 LDPLLTLKPVRFLEGELIHDLLTIFVSEKLSSYQ--TFYNNHKEFVHSQGLNHEQNIKKM 278
+D L L P+ L + + + SY + NN + +++ N QN +
Sbjct: 840 IDAFLNLSPLHSLGSQSTINPFNSSSNNNNQSYNGGSNLNNGNQNNNNRSSNPPQNNNED 899
Query: 279 RILSFMQMA-ETNPDLTFDEIISELQIEEKDVEAFVIEVLKTRLVRARMDQAQR 331
+LS+MQMA E++P + F IS+ E + + ++ + LV+ + Q Q+
Sbjct: 900 SLLSYMQMATESSPSINFHMGISDDGSETQSEDNKMMHTSGSNLVQQQQQQQQQ 953
>AF069997-1|AAC62234.1| 1027|Drosophila melanogaster CLOCK protein.
Length = 1027
Score = 32.3 bits (70), Expect = 1.2
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 3/114 (2%)
Query: 221 LDPLLTLKPVRFLEGELIHDLLTIFVSEKLSSYQ--TFYNNHKEFVHSQGLNHEQNIKKM 278
+D L L P+ L + + + SY + NN + +++ N QN +
Sbjct: 852 IDAFLNLSPLHSLGSQSTINPFNSSSNNNNQSYNGGSNLNNGNQNNNNRSSNPPQNNNED 911
Query: 279 RILSFMQMA-ETNPDLTFDEIISELQIEEKDVEAFVIEVLKTRLVRARMDQAQR 331
+LS MQMA E++P + F IS+ E + + ++ + LV+ + Q Q+
Sbjct: 912 SLLSCMQMATESSPSINFHMGISDDGSETQSEDNKMMHTSGSNLVQQQQQQQQQ 965
>AE014296-1322|AAX52754.1| 961|Drosophila melanogaster CG7391-PF,
isoform F protein.
Length = 961
Score = 32.3 bits (70), Expect = 1.2
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 3/114 (2%)
Query: 221 LDPLLTLKPVRFLEGELIHDLLTIFVSEKLSSYQ--TFYNNHKEFVHSQGLNHEQNIKKM 278
+D L L P+ L + + + SY + NN + +++ N QN +
Sbjct: 786 IDAFLNLSPLHSLGSQSTINPFNSSSNNNNQSYNGGSNLNNGNQNNNNRSSNPPQNNNED 845
Query: 279 RILSFMQMA-ETNPDLTFDEIISELQIEEKDVEAFVIEVLKTRLVRARMDQAQR 331
+LS MQMA E++P + F IS+ E + + ++ + LV+ + Q Q+
Sbjct: 846 SLLSCMQMATESSPSINFHMGISDDGSETQSEDNKMMHTSGSNLVQQQQQQQQQ 899
>AE014296-1321|AAX52753.1| 1027|Drosophila melanogaster CG7391-PD,
isoform D protein.
Length = 1027
Score = 32.3 bits (70), Expect = 1.2
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 3/114 (2%)
Query: 221 LDPLLTLKPVRFLEGELIHDLLTIFVSEKLSSYQ--TFYNNHKEFVHSQGLNHEQNIKKM 278
+D L L P+ L + + + SY + NN + +++ N QN +
Sbjct: 852 IDAFLNLSPLHSLGSQSTINPFNSSSNNNNQSYNGGSNLNNGNQNNNNRSSNPPQNNNED 911
Query: 279 RILSFMQMA-ETNPDLTFDEIISELQIEEKDVEAFVIEVLKTRLVRARMDQAQR 331
+LS MQMA E++P + F IS+ E + + ++ + LV+ + Q Q+
Sbjct: 912 SLLSCMQMATESSPSINFHMGISDDGSETQSEDNKMMHTSGSNLVQQQQQQQQQ 965
>AE014296-1320|AAS65057.1| 1027|Drosophila melanogaster CG7391-PC,
isoform C protein.
Length = 1027
Score = 32.3 bits (70), Expect = 1.2
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 3/114 (2%)
Query: 221 LDPLLTLKPVRFLEGELIHDLLTIFVSEKLSSYQ--TFYNNHKEFVHSQGLNHEQNIKKM 278
+D L L P+ L + + + SY + NN + +++ N QN +
Sbjct: 852 IDAFLNLSPLHSLGSQSTINPFNSSSNNNNQSYNGGSNLNNGNQNNNNRSSNPPQNNNED 911
Query: 279 RILSFMQMA-ETNPDLTFDEIISELQIEEKDVEAFVIEVLKTRLVRARMDQAQR 331
+LS MQMA E++P + F IS+ E + + ++ + LV+ + Q Q+
Sbjct: 912 SLLSCMQMATESSPSINFHMGISDDGSETQSEDNKMMHTSGSNLVQQQQQQQQQ 965
>AE014296-1319|AAN12019.1| 1023|Drosophila melanogaster CG7391-PB,
isoform B protein.
Length = 1023
Score = 32.3 bits (70), Expect = 1.2
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 3/114 (2%)
Query: 221 LDPLLTLKPVRFLEGELIHDLLTIFVSEKLSSYQ--TFYNNHKEFVHSQGLNHEQNIKKM 278
+D L L P+ L + + + SY + NN + +++ N QN +
Sbjct: 848 IDAFLNLSPLHSLGSQSTINPFNSSSNNNNQSYNGGSNLNNGNQNNNNRSSNPPQNNNED 907
Query: 279 RILSFMQMA-ETNPDLTFDEIISELQIEEKDVEAFVIEVLKTRLVRARMDQAQR 331
+LS MQMA E++P + F IS+ E + + ++ + LV+ + Q Q+
Sbjct: 908 SLLSCMQMATESSPSINFHMGISDDGSETQSEDNKMMHTSGSNLVQQQQQQQQQ 961
>AE014296-1318|AAF50516.1| 1023|Drosophila melanogaster CG7391-PA,
isoform A protein.
Length = 1023
Score = 32.3 bits (70), Expect = 1.2
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 3/114 (2%)
Query: 221 LDPLLTLKPVRFLEGELIHDLLTIFVSEKLSSYQ--TFYNNHKEFVHSQGLNHEQNIKKM 278
+D L L P+ L + + + SY + NN + +++ N QN +
Sbjct: 848 IDAFLNLSPLHSLGSQSTINPFNSSSNNNNQSYNGGSNLNNGNQNNNNRSSNPPQNNNED 907
Query: 279 RILSFMQMA-ETNPDLTFDEIISELQIEEKDVEAFVIEVLKTRLVRARMDQAQR 331
+LS MQMA E++P + F IS+ E + + ++ + LV+ + Q Q+
Sbjct: 908 SLLSCMQMATESSPSINFHMGISDDGSETQSEDNKMMHTSGSNLVQQQQQQQQQ 961
>BT024259-1|ABC86321.1| 119|Drosophila melanogaster IP15827p
protein.
Length = 119
Score = 31.9 bits (69), Expect = 1.5
Identities = 17/65 (26%), Positives = 28/65 (43%)
Query: 307 KDVEAFVIEVLKTRLVRARMDQAQRTVRVSNTMHRTFGREQWQQLRDVLLAWRANVHQAH 366
K+VE +++ L LVR +DQ V +S R R Q + L W +
Sbjct: 47 KEVELLIMKALALDLVRGEIDQVAGVVNMSWVQPRVLNRSQIVGMASTLDTWMGAITNME 106
Query: 367 EAMKS 371
+ M++
Sbjct: 107 KLMEN 111
>AY094791-1|AAM11144.1| 830|Drosophila melanogaster LD20292p
protein.
Length = 830
Score = 31.5 bits (68), Expect = 2.0
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 9/143 (6%)
Query: 149 LRKEFANCPPSNEQMQKLYRLLHQVLKDQNSELAAKVMIELLGTYTDENASYAREDAIKC 208
L K + C PSN+ + LLHQ+L+ + LA + L T EN ++ I
Sbjct: 486 LSKMYFACTPSNQVPVEEEHLLHQLLEYGPASLAVD-LTTYLNNITFENVKESKN--ILS 542
Query: 209 IATALADPNTF---LLDPLLTLKPVRFLEGELIHDLLTIFVSEKLSSYQTFYNNHKEFVH 265
+ LAD N + +L ++ PV E L + L+ F +L + + + +F+
Sbjct: 543 FCSILADHNDYCAKMLAKIIEAFPV-CDEKLLFYLLVFYFKLWRLDKVTSSFVS--DFIK 599
Query: 266 SQGLNHEQNIKKMRILSFMQMAE 288
+ L ++ I R+ +F + +
Sbjct: 600 THSLRMDKTIIVSRLYTFFNVTQ 622
>AY069836-1|AAL39981.1| 444|Drosophila melanogaster SD08021p
protein.
Length = 444
Score = 31.5 bits (68), Expect = 2.0
Identities = 18/115 (15%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
Query: 240 DLLTIFVSEKLSSYQTFYNNHKEFVHSQGL--NH-EQNIKKMRILSFMQMAETNPDLTFD 296
+L+ + + ++ ++T H+ + + H E ++ +R +++ ++
Sbjct: 314 NLVNSYQNNDINEFETILRQHRSNIMADQFIREHIEDLLRNIRTQVLIKLIRPYKNIAIP 373
Query: 297 EIISELQIEEKDVEAFVIEVLKTRLVRARMDQAQRTV---RVSNTMHRTFGREQW 348
I + L IE +VE+ ++ + ++ R+DQ + + +++++ R E+W
Sbjct: 374 FIANALNIEPAEVESLLVSCILDDTIKGRIDQVNQVLQLDKINSSASRYNALEKW 428
>AF129079-1|AAD28604.1| 444|Drosophila melanogaster COP9
signalosome subunit 2 CSN2 protein.
Length = 444
Score = 31.5 bits (68), Expect = 2.0
Identities = 18/115 (15%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
Query: 240 DLLTIFVSEKLSSYQTFYNNHKEFVHSQGL--NH-EQNIKKMRILSFMQMAETNPDLTFD 296
+L+ + + ++ ++T H+ + + H E ++ +R +++ ++
Sbjct: 314 NLVNSYQNNDINEFETILRQHRSNIMADQFIREHIEDLLRNIRTQVLIKLIRPYKNIAIP 373
Query: 297 EIISELQIEEKDVEAFVIEVLKTRLVRARMDQAQRTV---RVSNTMHRTFGREQW 348
I + L IE +VE+ ++ + ++ R+DQ + + +++++ R E+W
Sbjct: 374 FIANALNIEPAEVESLLVSCILDDTIKGRIDQVNQVLQLDKINSSASRYNALEKW 428
>AE014296-3765|AAN11410.1| 830|Drosophila melanogaster CG32350-PA
protein.
Length = 830
Score = 31.5 bits (68), Expect = 2.0
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 9/143 (6%)
Query: 149 LRKEFANCPPSNEQMQKLYRLLHQVLKDQNSELAAKVMIELLGTYTDENASYAREDAIKC 208
L K + C PSN+ + LLHQ+L+ + LA + L T EN ++ I
Sbjct: 486 LSKMYFACTPSNQVPVEEEHLLHQLLEYGPASLAVD-LTTYLNNITFENVKESKN--ILS 542
Query: 209 IATALADPNTF---LLDPLLTLKPVRFLEGELIHDLLTIFVSEKLSSYQTFYNNHKEFVH 265
+ LAD N + +L ++ PV E L + L+ F +L + + + +F+
Sbjct: 543 FCSILADHNDYCAKMLAKIIEAFPV-CDEKLLFYLLVFYFKLWRLDKVTSSFVS--DFIK 599
Query: 266 SQGLNHEQNIKKMRILSFMQMAE 288
+ L ++ I R+ +F + +
Sbjct: 600 THSLRMDKTIIVSRLYTFFNVTQ 622
>AE014134-1594|AAF52736.1| 444|Drosophila melanogaster CG9556-PB,
isoform B protein.
Length = 444
Score = 31.5 bits (68), Expect = 2.0
Identities = 18/115 (15%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
Query: 240 DLLTIFVSEKLSSYQTFYNNHKEFVHSQGL--NH-EQNIKKMRILSFMQMAETNPDLTFD 296
+L+ + + ++ ++T H+ + + H E ++ +R +++ ++
Sbjct: 314 NLVNSYQNNDINEFETILRQHRSNIMADQFIREHIEDLLRNIRTQVLIKLIRPYKNIAIP 373
Query: 297 EIISELQIEEKDVEAFVIEVLKTRLVRARMDQAQRTV---RVSNTMHRTFGREQW 348
I + L IE +VE+ ++ + ++ R+DQ + + +++++ R E+W
Sbjct: 374 FIANALNIEPAEVESLLVSCILDDTIKGRIDQVNQVLQLDKINSSASRYNALEKW 428
>AE014134-1593|AAN10685.1| 444|Drosophila melanogaster CG9556-PA,
isoform A protein.
Length = 444
Score = 31.5 bits (68), Expect = 2.0
Identities = 18/115 (15%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
Query: 240 DLLTIFVSEKLSSYQTFYNNHKEFVHSQGL--NH-EQNIKKMRILSFMQMAETNPDLTFD 296
+L+ + + ++ ++T H+ + + H E ++ +R +++ ++
Sbjct: 314 NLVNSYQNNDINEFETILRQHRSNIMADQFIREHIEDLLRNIRTQVLIKLIRPYKNIAIP 373
Query: 297 EIISELQIEEKDVEAFVIEVLKTRLVRARMDQAQRTV---RVSNTMHRTFGREQW 348
I + L IE +VE+ ++ + ++ R+DQ + + +++++ R E+W
Sbjct: 374 FIANALNIEPAEVESLLVSCILDDTIKGRIDQVNQVLQLDKINSSASRYNALEKW 428
>BT015203-1|AAT94432.1| 841|Drosophila melanogaster RE65032p
protein.
Length = 841
Score = 29.5 bits (63), Expect = 8.2
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 204 DAIKCIATALADPNTFLLDPLLTLKPVRFLEGELIHDLLTIFVSEKLSSYQTFY 257
D++KC +T L + T +L P + + EL H L +++SEK+ Y
Sbjct: 77 DSLKCASTMLGELRTSVLSPKSYYELYMAVTNELCH--LELYLSEKIDKKTDLY 128
>AF517634-1|AAM77747.1| 4876|Drosophila melanogaster BIR-containing
ubiquitin-conjugatingenzyme protein.
Length = 4876
Score = 29.5 bits (63), Expect = 8.2
Identities = 11/26 (42%), Positives = 20/26 (76%)
Query: 16 ALELRRYFKSLGAEISEEKSPKGIED 41
++ LRR+++ L E+S+ K P+G+ED
Sbjct: 4753 SMVLRRHYRHLREELSKLKPPRGLED 4778
>AE014297-1135|AAF54520.3| 4876|Drosophila melanogaster CG6303-PA
protein.
Length = 4876
Score = 29.5 bits (63), Expect = 8.2
Identities = 11/26 (42%), Positives = 20/26 (76%)
Query: 16 ALELRRYFKSLGAEISEEKSPKGIED 41
++ LRR+++ L E+S+ K P+G+ED
Sbjct: 4753 SMVLRRHYRHLREELSKLKPPRGLED 4778
>AE013599-3356|AAF46817.3| 631|Drosophila melanogaster CG5625-PB,
isoform B protein.
Length = 631
Score = 29.5 bits (63), Expect = 8.2
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 204 DAIKCIATALADPNTFLLDPLLTLKPVRFLEGELIHDLLTIFVSEKLSSYQTFY 257
D++KC +T L + T +L P + + EL H L +++SEK+ Y
Sbjct: 58 DSLKCASTMLGELRTSVLSPKSYYELYMAVTNELCH--LELYLSEKIDKKTDLY 109
>AE013599-3355|AAF46816.3| 612|Drosophila melanogaster CG5625-PA,
isoform A protein.
Length = 612
Score = 29.5 bits (63), Expect = 8.2
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 204 DAIKCIATALADPNTFLLDPLLTLKPVRFLEGELIHDLLTIFVSEKLSSYQTFY 257
D++KC +T L + T +L P + + EL H L +++SEK+ Y
Sbjct: 39 DSLKCASTMLGELRTSVLSPKSYYELYMAVTNELCH--LELYLSEKIDKKTDLY 90
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.320 0.134 0.381
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,932,080
Number of Sequences: 52641
Number of extensions: 672782
Number of successful extensions: 1823
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 1810
Number of HSP's gapped (non-prelim): 30
length of query: 386
length of database: 24,830,863
effective HSP length: 86
effective length of query: 300
effective length of database: 20,303,737
effective search space: 6091121100
effective search space used: 6091121100
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 63 (29.5 bits)
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