Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000900-TA|BGIBMGA000900-PA|undefined
(364 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D83785-1|BAA12114.2| 1042|Homo sapiens KIAA0200 protein. 37 0.13
BC007890-1|AAH07890.1| 263|Homo sapiens UBAP2 protein protein. 32 2.8
AL354989-1|CAI15298.1| 1119|Homo sapiens ubiquitin associated pr... 32 2.8
AL139113-8|CAI39659.1| 358|Homo sapiens ubiquitin associated pr... 32 2.8
AL139113-5|CAI39657.1| 1119|Homo sapiens ubiquitin associated pr... 32 2.8
AK074884-1|BAC11266.1| 597|Homo sapiens protein ( Homo sapiens ... 32 2.8
AB040924-1|BAA96015.1| 757|Homo sapiens KIAA1491 protein protein. 32 2.8
AF157327-1|AAF67493.1| 583|Homo sapiens AD-012 protein protein. 31 4.8
BC128051-1|AAI28052.1| 307|Homo sapiens SCLT1 protein protein. 31 6.4
BC121058-1|AAI21059.1| 175|Homo sapiens SCLT1 protein protein. 31 6.4
BC121057-1|AAI21058.1| 307|Homo sapiens SCLT1 protein protein. 31 6.4
BC064428-1|AAH64428.1| 79|Homo sapiens SCLT1 protein protein. 31 6.4
AK055217-1|BAB70876.1| 688|Homo sapiens protein ( Homo sapiens ... 31 6.4
>D83785-1|BAA12114.2| 1042|Homo sapiens KIAA0200 protein.
Length = 1042
Score = 36.7 bits (81), Expect = 0.13
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 8 QRRIETYRRRQSECVPRFDQSFSGACEQQNLETSALQKRFLEGKAKRQAK 57
+RRIE RR S C R++ E + T AL +R ++ KAKR K
Sbjct: 50 RRRIELCRRHHSTCEARYEAVSPERLELERQHTFALHQRCIQAKAKRAGK 99
>BC007890-1|AAH07890.1| 263|Homo sapiens UBAP2 protein protein.
Length = 263
Score = 32.3 bits (70), Expect = 2.8
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 293 GYRPRHTPPPIDHLHMSQQQQLHVTQPHHNLQVDCELVSGRKNE 336
G P + PPP H+ + QQ H HH+L D + SG++++
Sbjct: 198 GAAPGYAPPPFLHI-LPAHQQPHSQLLHHHLPQDAQSGSGQRSQ 240
>AL354989-1|CAI15298.1| 1119|Homo sapiens ubiquitin associated protein
2 protein.
Length = 1119
Score = 32.3 bits (70), Expect = 2.8
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 293 GYRPRHTPPPIDHLHMSQQQQLHVTQPHHNLQVDCELVSGRKNE 336
G P + PPP H+ + QQ H HH+L D + SG++++
Sbjct: 1054 GAAPGYAPPPFLHI-LPAHQQPHSQLLHHHLPQDAQSGSGQRSQ 1096
>AL139113-8|CAI39659.1| 358|Homo sapiens ubiquitin associated
protein 2 protein.
Length = 358
Score = 32.3 bits (70), Expect = 2.8
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 293 GYRPRHTPPPIDHLHMSQQQQLHVTQPHHNLQVDCELVSGRKNE 336
G P + PPP H+ + QQ H HH+L D + SG++++
Sbjct: 293 GAAPGYAPPPFLHI-LPAHQQPHSQLLHHHLPQDAQSGSGQRSQ 335
>AL139113-5|CAI39657.1| 1119|Homo sapiens ubiquitin associated protein
2 protein.
Length = 1119
Score = 32.3 bits (70), Expect = 2.8
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 293 GYRPRHTPPPIDHLHMSQQQQLHVTQPHHNLQVDCELVSGRKNE 336
G P + PPP H+ + QQ H HH+L D + SG++++
Sbjct: 1054 GAAPGYAPPPFLHI-LPAHQQPHSQLLHHHLPQDAQSGSGQRSQ 1096
>AK074884-1|BAC11266.1| 597|Homo sapiens protein ( Homo sapiens
cDNA FLJ90403 fis, clone NT2RP2006042, weakly similar to
GLUCOAMYLASE S1/S2 PRECURSOR (EC 3.2.1.3). ).
Length = 597
Score = 32.3 bits (70), Expect = 2.8
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 293 GYRPRHTPPPIDHLHMSQQQQLHVTQPHHNLQVDCELVSGRKNE 336
G P + PPP H+ + QQ H HH+L D + SG++++
Sbjct: 532 GAAPGYAPPPFLHI-LPAHQQPHSQLLHHHLPQDAQSGSGQRSQ 574
>AB040924-1|BAA96015.1| 757|Homo sapiens KIAA1491 protein protein.
Length = 757
Score = 32.3 bits (70), Expect = 2.8
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 293 GYRPRHTPPPIDHLHMSQQQQLHVTQPHHNLQVDCELVSGRKNE 336
G P + PPP H+ + QQ H HH+L D + SG++++
Sbjct: 692 GAAPGYAPPPFLHI-LPAHQQPHSQLLHHHLPQDAQSGSGQRSQ 734
>AF157327-1|AAF67493.1| 583|Homo sapiens AD-012 protein protein.
Length = 583
Score = 31.5 bits (68), Expect = 4.8
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 293 GYRPRHTPPPIDHLHMSQQQQLHVTQPHHNLQVDCELVSGRKN 335
G P + PPP H+ + QQ H HH+L D + SG+++
Sbjct: 488 GAAPGYAPPPFLHI-LPAHQQPHSQLLHHHLPQDAQSGSGQRS 529
>BC128051-1|AAI28052.1| 307|Homo sapiens SCLT1 protein protein.
Length = 307
Score = 31.1 bits (67), Expect = 6.4
Identities = 14/57 (24%), Positives = 30/57 (52%)
Query: 185 LDECAAALERDAASAFPGLADLIGEDDGDDTFEDLITEISEYPEFMKDFDLDAGKFN 241
L+E + ++ S + + + + +GDDTFE+L+ + S + ++D G+ N
Sbjct: 15 LNEDFRRYQMESFSKYSSVQKAVCQGEGDDTFENLVFDQSFLAPLVTEYDKHLGELN 71
>BC121058-1|AAI21059.1| 175|Homo sapiens SCLT1 protein protein.
Length = 175
Score = 31.1 bits (67), Expect = 6.4
Identities = 14/57 (24%), Positives = 30/57 (52%)
Query: 185 LDECAAALERDAASAFPGLADLIGEDDGDDTFEDLITEISEYPEFMKDFDLDAGKFN 241
L+E + ++ S + + + + +GDDTFE+L+ + S + ++D G+ N
Sbjct: 15 LNEDFRRYQMESFSKYSSVQKAVCQGEGDDTFENLVFDQSFLAPLVTEYDKHLGELN 71
>BC121057-1|AAI21058.1| 307|Homo sapiens SCLT1 protein protein.
Length = 307
Score = 31.1 bits (67), Expect = 6.4
Identities = 14/57 (24%), Positives = 30/57 (52%)
Query: 185 LDECAAALERDAASAFPGLADLIGEDDGDDTFEDLITEISEYPEFMKDFDLDAGKFN 241
L+E + ++ S + + + + +GDDTFE+L+ + S + ++D G+ N
Sbjct: 15 LNEDFRRYQMESFSKYSSVQKAVCQGEGDDTFENLVFDQSFLAPLVTEYDKHLGELN 71
>BC064428-1|AAH64428.1| 79|Homo sapiens SCLT1 protein protein.
Length = 79
Score = 31.1 bits (67), Expect = 6.4
Identities = 14/57 (24%), Positives = 30/57 (52%)
Query: 185 LDECAAALERDAASAFPGLADLIGEDDGDDTFEDLITEISEYPEFMKDFDLDAGKFN 241
L+E + ++ S + + + + +GDDTFE+L+ + S + ++D G+ N
Sbjct: 15 LNEDFRRYQMESFSKYSSVQKAVCQGEGDDTFENLVFDQSFLAPLVTEYDKHLGELN 71
>AK055217-1|BAB70876.1| 688|Homo sapiens protein ( Homo sapiens
cDNA FLJ30655 fis, clone DFNES2000268, weakly similar to
MYOSIN HEAVY CHAIN, STRIATED MUSCLE. ).
Length = 688
Score = 31.1 bits (67), Expect = 6.4
Identities = 14/57 (24%), Positives = 30/57 (52%)
Query: 185 LDECAAALERDAASAFPGLADLIGEDDGDDTFEDLITEISEYPEFMKDFDLDAGKFN 241
L+E + ++ S + + + + +GDDTFE+L+ + S + ++D G+ N
Sbjct: 15 LNEDFRRYQMESFSKYSSVQKAVCQGEGDDTFENLVFDQSFLAPLVTEYDKHLGELN 71
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.316 0.133 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,975,812
Number of Sequences: 224733
Number of extensions: 2231822
Number of successful extensions: 4745
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 4732
Number of HSP's gapped (non-prelim): 13
length of query: 364
length of database: 73,234,838
effective HSP length: 91
effective length of query: 273
effective length of database: 52,784,135
effective search space: 14410068855
effective search space used: 14410068855
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 66 (30.7 bits)
- SilkBase 1999-2023 -