GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000900-TA|BGIBMGA000900-PA|undefined
         (364 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D83785-1|BAA12114.2| 1042|Homo sapiens KIAA0200 protein.               37   0.13 
BC007890-1|AAH07890.1|  263|Homo sapiens UBAP2 protein protein.        32   2.8  
AL354989-1|CAI15298.1| 1119|Homo sapiens ubiquitin associated pr...    32   2.8  
AL139113-8|CAI39659.1|  358|Homo sapiens ubiquitin associated pr...    32   2.8  
AL139113-5|CAI39657.1| 1119|Homo sapiens ubiquitin associated pr...    32   2.8  
AK074884-1|BAC11266.1|  597|Homo sapiens protein ( Homo sapiens ...    32   2.8  
AB040924-1|BAA96015.1|  757|Homo sapiens KIAA1491 protein protein.     32   2.8  
AF157327-1|AAF67493.1|  583|Homo sapiens AD-012 protein protein.       31   4.8  
BC128051-1|AAI28052.1|  307|Homo sapiens SCLT1 protein protein.        31   6.4  
BC121058-1|AAI21059.1|  175|Homo sapiens SCLT1 protein protein.        31   6.4  
BC121057-1|AAI21058.1|  307|Homo sapiens SCLT1 protein protein.        31   6.4  
BC064428-1|AAH64428.1|   79|Homo sapiens SCLT1 protein protein.        31   6.4  
AK055217-1|BAB70876.1|  688|Homo sapiens protein ( Homo sapiens ...    31   6.4  

>D83785-1|BAA12114.2| 1042|Homo sapiens KIAA0200 protein.
          Length = 1042

 Score = 36.7 bits (81), Expect = 0.13
 Identities = 19/50 (38%), Positives = 26/50 (52%)

Query: 8  QRRIETYRRRQSECVPRFDQSFSGACEQQNLETSALQKRFLEGKAKRQAK 57
          +RRIE  RR  S C  R++       E +   T AL +R ++ KAKR  K
Sbjct: 50 RRRIELCRRHHSTCEARYEAVSPERLELERQHTFALHQRCIQAKAKRAGK 99


>BC007890-1|AAH07890.1|  263|Homo sapiens UBAP2 protein protein.
          Length = 263

 Score = 32.3 bits (70), Expect = 2.8
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 293 GYRPRHTPPPIDHLHMSQQQQLHVTQPHHNLQVDCELVSGRKNE 336
           G  P + PPP  H+ +   QQ H    HH+L  D +  SG++++
Sbjct: 198 GAAPGYAPPPFLHI-LPAHQQPHSQLLHHHLPQDAQSGSGQRSQ 240


>AL354989-1|CAI15298.1| 1119|Homo sapiens ubiquitin associated protein
            2 protein.
          Length = 1119

 Score = 32.3 bits (70), Expect = 2.8
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 293  GYRPRHTPPPIDHLHMSQQQQLHVTQPHHNLQVDCELVSGRKNE 336
            G  P + PPP  H+ +   QQ H    HH+L  D +  SG++++
Sbjct: 1054 GAAPGYAPPPFLHI-LPAHQQPHSQLLHHHLPQDAQSGSGQRSQ 1096


>AL139113-8|CAI39659.1|  358|Homo sapiens ubiquitin associated
           protein 2 protein.
          Length = 358

 Score = 32.3 bits (70), Expect = 2.8
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 293 GYRPRHTPPPIDHLHMSQQQQLHVTQPHHNLQVDCELVSGRKNE 336
           G  P + PPP  H+ +   QQ H    HH+L  D +  SG++++
Sbjct: 293 GAAPGYAPPPFLHI-LPAHQQPHSQLLHHHLPQDAQSGSGQRSQ 335


>AL139113-5|CAI39657.1| 1119|Homo sapiens ubiquitin associated protein
            2 protein.
          Length = 1119

 Score = 32.3 bits (70), Expect = 2.8
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 293  GYRPRHTPPPIDHLHMSQQQQLHVTQPHHNLQVDCELVSGRKNE 336
            G  P + PPP  H+ +   QQ H    HH+L  D +  SG++++
Sbjct: 1054 GAAPGYAPPPFLHI-LPAHQQPHSQLLHHHLPQDAQSGSGQRSQ 1096


>AK074884-1|BAC11266.1|  597|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90403 fis, clone NT2RP2006042, weakly similar to
           GLUCOAMYLASE S1/S2 PRECURSOR (EC 3.2.1.3). ).
          Length = 597

 Score = 32.3 bits (70), Expect = 2.8
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 293 GYRPRHTPPPIDHLHMSQQQQLHVTQPHHNLQVDCELVSGRKNE 336
           G  P + PPP  H+ +   QQ H    HH+L  D +  SG++++
Sbjct: 532 GAAPGYAPPPFLHI-LPAHQQPHSQLLHHHLPQDAQSGSGQRSQ 574


>AB040924-1|BAA96015.1|  757|Homo sapiens KIAA1491 protein protein.
          Length = 757

 Score = 32.3 bits (70), Expect = 2.8
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 293 GYRPRHTPPPIDHLHMSQQQQLHVTQPHHNLQVDCELVSGRKNE 336
           G  P + PPP  H+ +   QQ H    HH+L  D +  SG++++
Sbjct: 692 GAAPGYAPPPFLHI-LPAHQQPHSQLLHHHLPQDAQSGSGQRSQ 734


>AF157327-1|AAF67493.1|  583|Homo sapiens AD-012 protein protein.
          Length = 583

 Score = 31.5 bits (68), Expect = 4.8
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 293 GYRPRHTPPPIDHLHMSQQQQLHVTQPHHNLQVDCELVSGRKN 335
           G  P + PPP  H+ +   QQ H    HH+L  D +  SG+++
Sbjct: 488 GAAPGYAPPPFLHI-LPAHQQPHSQLLHHHLPQDAQSGSGQRS 529


>BC128051-1|AAI28052.1|  307|Homo sapiens SCLT1 protein protein.
          Length = 307

 Score = 31.1 bits (67), Expect = 6.4
 Identities = 14/57 (24%), Positives = 30/57 (52%)

Query: 185 LDECAAALERDAASAFPGLADLIGEDDGDDTFEDLITEISEYPEFMKDFDLDAGKFN 241
           L+E     + ++ S +  +   + + +GDDTFE+L+ + S     + ++D   G+ N
Sbjct: 15  LNEDFRRYQMESFSKYSSVQKAVCQGEGDDTFENLVFDQSFLAPLVTEYDKHLGELN 71


>BC121058-1|AAI21059.1|  175|Homo sapiens SCLT1 protein protein.
          Length = 175

 Score = 31.1 bits (67), Expect = 6.4
 Identities = 14/57 (24%), Positives = 30/57 (52%)

Query: 185 LDECAAALERDAASAFPGLADLIGEDDGDDTFEDLITEISEYPEFMKDFDLDAGKFN 241
           L+E     + ++ S +  +   + + +GDDTFE+L+ + S     + ++D   G+ N
Sbjct: 15  LNEDFRRYQMESFSKYSSVQKAVCQGEGDDTFENLVFDQSFLAPLVTEYDKHLGELN 71


>BC121057-1|AAI21058.1|  307|Homo sapiens SCLT1 protein protein.
          Length = 307

 Score = 31.1 bits (67), Expect = 6.4
 Identities = 14/57 (24%), Positives = 30/57 (52%)

Query: 185 LDECAAALERDAASAFPGLADLIGEDDGDDTFEDLITEISEYPEFMKDFDLDAGKFN 241
           L+E     + ++ S +  +   + + +GDDTFE+L+ + S     + ++D   G+ N
Sbjct: 15  LNEDFRRYQMESFSKYSSVQKAVCQGEGDDTFENLVFDQSFLAPLVTEYDKHLGELN 71


>BC064428-1|AAH64428.1|   79|Homo sapiens SCLT1 protein protein.
          Length = 79

 Score = 31.1 bits (67), Expect = 6.4
 Identities = 14/57 (24%), Positives = 30/57 (52%)

Query: 185 LDECAAALERDAASAFPGLADLIGEDDGDDTFEDLITEISEYPEFMKDFDLDAGKFN 241
           L+E     + ++ S +  +   + + +GDDTFE+L+ + S     + ++D   G+ N
Sbjct: 15  LNEDFRRYQMESFSKYSSVQKAVCQGEGDDTFENLVFDQSFLAPLVTEYDKHLGELN 71


>AK055217-1|BAB70876.1|  688|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30655 fis, clone DFNES2000268, weakly similar to
           MYOSIN HEAVY CHAIN, STRIATED MUSCLE. ).
          Length = 688

 Score = 31.1 bits (67), Expect = 6.4
 Identities = 14/57 (24%), Positives = 30/57 (52%)

Query: 185 LDECAAALERDAASAFPGLADLIGEDDGDDTFEDLITEISEYPEFMKDFDLDAGKFN 241
           L+E     + ++ S +  +   + + +GDDTFE+L+ + S     + ++D   G+ N
Sbjct: 15  LNEDFRRYQMESFSKYSSVQKAVCQGEGDDTFENLVFDQSFLAPLVTEYDKHLGELN 71


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.316    0.133    0.393 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,975,812
Number of Sequences: 224733
Number of extensions: 2231822
Number of successful extensions: 4745
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 4732
Number of HSP's gapped (non-prelim): 13
length of query: 364
length of database: 73,234,838
effective HSP length: 91
effective length of query: 273
effective length of database: 52,784,135
effective search space: 14410068855
effective search space used: 14410068855
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 66 (30.7 bits)