Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000898-TA|BGIBMGA000898-PA|undefined
(173 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q15428 Cluster: Splicing factor 3A subunit 2; n=69; Euk... 157 1e-37
UniRef50_A2XET4 Cluster: Putative uncharacterized protein; n=2; ... 103 3e-21
UniRef50_A1CIB5 Cluster: Splicing factor 3a subunit 2, putative;... 99 3e-20
UniRef50_A5AVJ0 Cluster: Putative uncharacterized protein; n=1; ... 96 4e-19
UniRef50_Q0TZL0 Cluster: Putative uncharacterized protein; n=1; ... 95 1e-18
UniRef50_Q6LF56 Cluster: Splicing factor 3a subunit, putative; n... 87 2e-16
UniRef50_Q4P204 Cluster: Putative uncharacterized protein; n=1; ... 83 3e-15
UniRef50_UPI0000498F7E Cluster: splicing factor 3a subunit 2; n=... 77 2e-13
UniRef50_Q5CI85 Cluster: F11a10.2 protein; n=3; Cryptosporidium|... 74 2e-12
UniRef50_UPI0000565504 Cluster: UPI0000565504 related cluster; n... 71 1e-11
UniRef50_Q3LVY8 Cluster: MRNA splicing factor 3A subunit 2; n=1;... 64 1e-09
UniRef50_A2DA83 Cluster: Splicing factor, putative; n=1; Trichom... 62 7e-09
UniRef50_A3GHS1 Cluster: Predicted protein; n=2; Pichia|Rep: Pre... 60 4e-08
UniRef50_Q5APP1 Cluster: Potential splicing factor SF3A subunit ... 58 1e-07
UniRef50_Q4FZ32 Cluster: Putative uncharacterized protein; n=3; ... 51 1e-05
UniRef50_Q8SSB4 Cluster: SPLICEOSOME-ASSOCIATED PROTEIN 62; n=1;... 51 2e-05
UniRef50_Q4DJR6 Cluster: Putative uncharacterized protein; n=3; ... 47 3e-04
UniRef50_Q7R0G4 Cluster: GLP_29_31467_32135; n=1; Giardia lambli... 39 0.072
UniRef50_A2EI89 Cluster: Putative uncharacterized protein; n=1; ... 34 2.0
UniRef50_Q5V3N9 Cluster: 8-amino-7-oxononanoate synthase; n=2; H... 33 3.6
UniRef50_Q5KPQ4 Cluster: Cactin, putative; n=2; Filobasidiella n... 33 4.7
UniRef50_UPI000069E630 Cluster: UPI000069E630 related cluster; n... 32 6.2
UniRef50_Q9LU60 Cluster: Arabidopsis thaliana genomic DNA, chrom... 32 6.2
UniRef50_Q7RQA1 Cluster: Putative uncharacterized protein PY0120... 32 8.2
UniRef50_Q0TZE8 Cluster: Putative uncharacterized protein; n=1; ... 32 8.2
UniRef50_A2BJU5 Cluster: Uncharacterized conserved archaeal prot... 32 8.2
UniRef50_Q07350 Cluster: Pre-mRNA-splicing factor PRP11; n=6; Sa... 32 8.2
>UniRef50_Q15428 Cluster: Splicing factor 3A subunit 2; n=69;
Eukaryota|Rep: Splicing factor 3A subunit 2 - Homo
sapiens (Human)
Length = 464
Score = 157 bits (381), Expect = 1e-37
Identities = 67/91 (73%), Positives = 79/91 (86%)
Query: 46 FMKNHLEIAEGVIPRHRFMSAYEQKIEPPDRRWQYLLFAAEPYETIAFKVPSREVEKHDS 105
F ++ EIAEG++PRHRFMSAYEQ+IEPPDRRWQYLL AAEPYETIAFKVPSRE++K +
Sbjct: 134 FQIDYPEIAEGIMPRHRFMSAYEQRIEPPDRRWQYLLMAAEPYETIAFKVPSREIDKAEG 193
Query: 106 KFWTHWNKDTKQFFLQFAFKMDQLRMPPPHP 136
KFWTHWN++TKQFFLQF FKM++ PP P
Sbjct: 194 KFWTHWNRETKQFFLQFHFKMEKPPAPPSLP 224
Score = 103 bits (247), Expect = 2e-21
Identities = 47/51 (92%), Positives = 49/51 (96%)
Query: 1 MDFQNRPGGKTGGGGVASWSESNRDRRERLRQLALETIDLNKDPYFMKNHL 51
MDFQ+RPGGKTG GGVAS SESNRDRRERLRQLALETID+NKDPYFMKNHL
Sbjct: 1 MDFQHRPGGKTGSGGVASSSESNRDRRERLRQLALETIDINKDPYFMKNHL 51
>UniRef50_A2XET4 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 352
Score = 103 bits (246), Expect = 3e-21
Identities = 47/87 (54%), Positives = 60/87 (68%), Gaps = 2/87 (2%)
Query: 52 EIAEGVIPRHRFMSAYEQKIEPPDRRWQYLLFAAEPYETIAFKVPSREVEKHDSKFWTHW 111
EI E PRHRFM++YEQK+E D+++QYLLFAAEPYE I FK+PS E++K KF+ +W
Sbjct: 168 EIEENSKPRHRFMASYEQKVESWDKKYQYLLFAAEPYEIIGFKIPSAEIDKSADKFFNYW 227
Query: 112 NKDTKQFFLQFAFKMDQ--LRMPPPHP 136
+ D KQ+ LQ FK Q PP P
Sbjct: 228 DPDKKQYILQLYFKTRQPEANKPPAAP 254
Score = 66.1 bits (154), Expect = 4e-10
Identities = 31/44 (70%), Positives = 33/44 (75%)
Query: 8 GGKTGGGGVASWSESNRDRRERLRQLALETIDLNKDPYFMKNHL 51
G K G GG AS DRRERLR+LALETIDL KDPYFM+NHL
Sbjct: 6 GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHL 49
>UniRef50_A1CIB5 Cluster: Splicing factor 3a subunit 2, putative;
n=11; Pezizomycotina|Rep: Splicing factor 3a subunit 2,
putative - Aspergillus clavatus
Length = 272
Score = 99 bits (238), Expect = 3e-20
Identities = 41/84 (48%), Positives = 64/84 (76%), Gaps = 1/84 (1%)
Query: 46 FMKNHLEIAEGVIPRHRFMSAYEQKIE-PPDRRWQYLLFAAEPYETIAFKVPSREVEKHD 104
F + EI GV PR RFMSA+EQK+E PPD+ +QYL+ AAEPY+T FK+ +RE+++ D
Sbjct: 172 FQLQYQEITPGVTPRVRFMSAFEQKVEEPPDKNFQYLVVAAEPYQTCGFKLQAREIDRRD 231
Query: 105 SKFWTHWNKDTKQFFLQFAFKMDQ 128
++WT +++D+K+F++Q FK ++
Sbjct: 232 GRYWTWFDEDSKEFWIQIMFKTER 255
Score = 86.6 bits (205), Expect = 3e-16
Identities = 39/51 (76%), Positives = 44/51 (86%)
Query: 1 MDFQNRPGGKTGGGGVASWSESNRDRRERLRQLALETIDLNKDPYFMKNHL 51
MD+QNR G K GGGGVAS S +N DRRERLR+LALETIDL+KDPYF KNH+
Sbjct: 35 MDYQNRAGSKFGGGGVASHSATNADRRERLRKLALETIDLDKDPYFFKNHV 85
>UniRef50_A5AVJ0 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 427
Score = 95.9 bits (228), Expect = 4e-19
Identities = 41/73 (56%), Positives = 56/73 (76%)
Query: 46 FMKNHLEIAEGVIPRHRFMSAYEQKIEPPDRRWQYLLFAAEPYETIAFKVPSREVEKHDS 105
F + EI + PRHRFMS++EQ+++ D+R+QYLLFAAEPYE IAFKVPS E++K
Sbjct: 128 FQIEYPEIEDLAKPRHRFMSSFEQRVQSFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTP 187
Query: 106 KFWTHWNKDTKQF 118
KF++HW+ D+K F
Sbjct: 188 KFFSHWDPDSKMF 200
Score = 65.7 bits (153), Expect = 5e-10
Identities = 34/55 (61%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 8 GGKTGGGGVASWSESNRDRRERLRQLALETIDLNKDPYFMKNHLEIAEGVIPRHR 62
G K G GG AS DRRERLR+LALETIDL KDPYFM+NHL A + P H+
Sbjct: 6 GSKPGTGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGRAI-IWPTHK 59
>UniRef50_Q0TZL0 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 218
Score = 94.7 bits (225), Expect = 1e-18
Identities = 38/77 (49%), Positives = 57/77 (74%)
Query: 52 EIAEGVIPRHRFMSAYEQKIEPPDRRWQYLLFAAEPYETIAFKVPSREVEKHDSKFWTHW 111
+I GV+PR RFMSAYEQ++E D +QYL+ A EPYET+A K+ +RE+++ + KFWT +
Sbjct: 127 DITTGVVPRVRFMSAYEQRVEEADPNYQYLIVAGEPYETVAVKLQAREIDRREGKFWTWF 186
Query: 112 NKDTKQFFLQFAFKMDQ 128
+ D K+F+ Q FK ++
Sbjct: 187 DDDNKEFWCQLLFKTER 203
Score = 31.9 bits (69), Expect = 8.2
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 1 MDFQNRPGGKTGGGGVASWSESNRDRRER--LRQLALETIDLNKDPYFMKNHLE 52
M + PG + GG V S R + E + +KDPYF KNH+E
Sbjct: 1 MSAETAPGFQVSGGRVVSPHSQQRMQTEESVCGSSRSRRLTSDKDPYFFKNHVE 54
>UniRef50_Q6LF56 Cluster: Splicing factor 3a subunit, putative; n=5;
Plasmodium|Rep: Splicing factor 3a subunit, putative -
Plasmodium falciparum (isolate 3D7)
Length = 233
Score = 87.0 bits (206), Expect = 2e-16
Identities = 44/91 (48%), Positives = 61/91 (67%), Gaps = 5/91 (5%)
Query: 53 IAEGVIPRHRFMSAYEQKIEPPDRRWQYLLFAAEPYETIAFKVPSREVEKHDSKFWTHWN 112
I E P+ RFMS++EQKIE PD+++QYLLFAAEPYETIAFK+P+ ++++++ F+ W
Sbjct: 139 IKENTKPKFRFMSSFEQKIEAPDKKYQYLLFAAEPYETIAFKIPNIDIDENEG-FYYKWF 197
Query: 113 KDTKQFFLQFAFKMDQLRMPPPHPKMWEGHS 143
K F +Q F Q PP H + E HS
Sbjct: 198 DKKKIFVMQIHF---QNAFPPGHVNLRE-HS 224
Score = 69.7 bits (163), Expect = 3e-11
Identities = 32/55 (58%), Positives = 41/55 (74%)
Query: 1 MDFQNRPGGKTGGGGVASWSESNRDRRERLRQLALETIDLNKDPYFMKNHLEIAE 55
MDFQNR G KTG G S + N++RRERL+QLALE ID+ KDPY +KN++ + E
Sbjct: 1 MDFQNRVGHKTGSGMPLSREDINQERRERLKQLALENIDITKDPYILKNNVGMFE 55
>UniRef50_Q4P204 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 313
Score = 83.4 bits (197), Expect = 3e-15
Identities = 35/54 (64%), Positives = 46/54 (85%)
Query: 52 EIAEGVIPRHRFMSAYEQKIEPPDRRWQYLLFAAEPYETIAFKVPSREVEKHDS 105
EI +GV+P HRFM ++EQKIE PDR +QYL+ AAEPYETIAFK+ SRE+++ D+
Sbjct: 224 EIKQGVMPMHRFMGSFEQKIETPDRNYQYLVVAAEPYETIAFKLQSREIDRKDT 277
Score = 74.1 bits (174), Expect = 2e-12
Identities = 36/51 (70%), Positives = 41/51 (80%), Gaps = 2/51 (3%)
Query: 1 MDFQNRPGGKTGGGGVASWSESNRDRRERLRQLALETIDLNKDPYFMKNHL 51
MDF +R G K GGG+A SESN DRR+RLR+LALETIDL KDPY +KNHL
Sbjct: 77 MDFSSRGGNK--GGGIAGASESNVDRRDRLRKLALETIDLAKDPYLLKNHL 125
>UniRef50_UPI0000498F7E Cluster: splicing factor 3a subunit 2; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: splicing factor 3a
subunit 2 - Entamoeba histolytica HM-1:IMSS
Length = 218
Score = 77.0 bits (181), Expect = 2e-13
Identities = 35/79 (44%), Positives = 53/79 (67%), Gaps = 3/79 (3%)
Query: 52 EIAEGVIPRHRFMSAYEQKIEPPDRRWQYLLFAAEPYETIAFKVPSREVEKHDS--KFW- 108
+IA GVIP + M A+EQ +EPPD +QYL+ AAEPY++IAFK+P+ EVE ++ K+
Sbjct: 140 DIANGVIPLFKIMGAFEQHVEPPDNNYQYLIIAAEPYQSIAFKIPNMEVELDETTGKYGE 199
Query: 109 THWNKDTKQFFLQFAFKMD 127
W T ++L+ F ++
Sbjct: 200 ERWEVSTHTYYLKINFVLN 218
Score = 60.1 bits (139), Expect = 3e-08
Identities = 27/49 (55%), Positives = 35/49 (71%)
Query: 3 FQNRPGGKTGGGGVASWSESNRDRRERLRQLALETIDLNKDPYFMKNHL 51
F G K G GG+A+ +E+ R+ERL+QLALE IDL+KDPYF K H+
Sbjct: 2 FGREHGSKPGSGGLATLAETAAARKERLKQLALERIDLSKDPYFYKTHV 50
>UniRef50_Q5CI85 Cluster: F11a10.2 protein; n=3;
Cryptosporidium|Rep: F11a10.2 protein - Cryptosporidium
hominis
Length = 216
Score = 73.7 bits (173), Expect = 2e-12
Identities = 33/51 (64%), Positives = 42/51 (82%)
Query: 1 MDFQNRPGGKTGGGGVASWSESNRDRRERLRQLALETIDLNKDPYFMKNHL 51
MD++NR G KTG G +AS + +RRERLR+LALE+IDL+KDPY+MKNHL
Sbjct: 1 MDYENRGGHKTGSGALASSQDIAIERRERLRRLALESIDLSKDPYYMKNHL 51
Score = 64.9 bits (151), Expect = 1e-09
Identities = 28/70 (40%), Positives = 47/70 (67%), Gaps = 2/70 (2%)
Query: 52 EIAEGVIPRHRFMSAYEQKIEPPDRRWQYLLFAAEPYETIAFKVPSREVEKHDSKFWTHW 111
EI E +P +R MS +EQK+E P+ ++QYL AEPY TI ++P+ E+ K ++ T+W
Sbjct: 141 EILEDHVPGYRIMSCWEQKVEKPNPKYQYLFVGAEPYNTIGIRIPNIELIKQRTQ--TYW 198
Query: 112 NKDTKQFFLQ 121
+++ K + +Q
Sbjct: 199 DEERKIYHIQ 208
>UniRef50_UPI0000565504 Cluster: UPI0000565504 related cluster; n=1;
Mus musculus|Rep: UPI0000565504 UniRef100 entry - Mus
musculus
Length = 354
Score = 70.9 bits (166), Expect = 1e-11
Identities = 58/155 (37%), Positives = 75/155 (48%), Gaps = 20/155 (12%)
Query: 1 MDFQNRPGGKTGGGGVASWSESNRDRRERLRQLALETIDLNKDPYFMKNH---------- 50
M+FQ+ PGGKTG GGVAS S D RERL+QL LETI++NKD FMK +
Sbjct: 1 MNFQHPPGGKTGSGGVAS---SKLDWRERLQQLTLETININKDLNFMKKNFMTWNPRSKL 57
Query: 51 ---LEIAEGVIPRHRFMSAYEQKI---EPPDRRWQYLLFAAEPYETIAFKVPSREVEKHD 104
L EG H + ++ + PP AAEPYETIAFKV + ++
Sbjct: 58 CLTLHNNEGSYLAHIQGNKHQTNMAWRPPPTPPAAAGSMAAEPYETIAFKVRLTRLRRNQ 117
Query: 105 SKFWT-HWNKDTKQFFLQFAFKMDQLRMPPPHPKM 138
+ F H+ + Q L K + P P M
Sbjct: 118 AVFLQFHFKMEKPQSLLDSQQKPQASSISLPTPLM 152
>UniRef50_Q3LVY8 Cluster: MRNA splicing factor 3A subunit 2; n=1;
Bigelowiella natans|Rep: MRNA splicing factor 3A subunit
2 - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 202
Score = 64.5 bits (150), Expect = 1e-09
Identities = 25/67 (37%), Positives = 44/67 (65%)
Query: 58 IPRHRFMSAYEQKIEPPDRRWQYLLFAAEPYETIAFKVPSREVEKHDSKFWTHWNKDTKQ 117
+P +R ++ YEQ IE PD +QYLL A+ Y TI FK+P+ ++ + +++W+ + K+
Sbjct: 136 VPDYRILTTYEQSIEKPDNNYQYLLVASPNYVTICFKIPNLLIDYENQFTYSYWDFNLKK 195
Query: 118 FFLQFAF 124
F++ AF
Sbjct: 196 FYISLAF 202
>UniRef50_A2DA83 Cluster: Splicing factor, putative; n=1;
Trichomonas vaginalis G3|Rep: Splicing factor, putative
- Trichomonas vaginalis G3
Length = 219
Score = 62.1 bits (144), Expect = 7e-09
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 52 EIAEGVIPRHRFMSAYEQKIEPPDRRWQYLLFAAEPYETIAFKVPSREVEKHDSKFWTHW 111
+I + P++R MS YEQ +EPPD +YLLFAA PY T+ FK+P+ + + K W
Sbjct: 143 DIKKYTSPKYRIMSTYEQTVEPPDPNHKYLLFAAIPYNTVCFKIPNMNI--INDKIIEDW 200
Query: 112 NKDTKQFFLQ 121
K++ Q
Sbjct: 201 KPHEKKYTFQ 210
>UniRef50_A3GHS1 Cluster: Predicted protein; n=2; Pichia|Rep:
Predicted protein - Pichia stipitis (Yeast)
Length = 238
Score = 59.7 bits (138), Expect = 4e-08
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 59 PRHRFMSAYEQKIEPPDRRWQYLLFAAEPYETIAFKVPS-REVEK------HDSKFWTHW 111
P RFMS YE QYL+ +AEPYE I F +P+ +E++K +W W
Sbjct: 154 PFFRFMSYYELSEATDPSNLQYLVISAEPYENICFIIPNDKEIDKPVEQGEMSKSYWWFW 213
Query: 112 NKDTKQFFLQFAFK 125
+ D KQFFLQF ++
Sbjct: 214 DSDAKQFFLQFLYR 227
Score = 53.6 bits (123), Expect = 2e-06
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 1 MDFQNRPGGKTGGGGVASWSESNRDRRERLRQ-LALETIDLNKDPYFMKNHLEIAE 55
MD+ R K G GGVA E+N R+R+++ LA + +DL+ DPY +NHL + E
Sbjct: 1 MDYSGRVNSKKGAGGVAGAEETNVHTRQRIKELLATQVLDLDNDPYVFRNHLGLLE 56
>UniRef50_Q5APP1 Cluster: Potential splicing factor SF3A subunit
Sap62; n=3; Saccharomycetales|Rep: Potential splicing
factor SF3A subunit Sap62 - Candida albicans (Yeast)
Length = 256
Score = 58.0 bits (134), Expect = 1e-07
Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 7/59 (11%)
Query: 75 DRRWQYLLFAAEPYETIAFKVPSR-------EVEKHDSKFWTHWNKDTKQFFLQFAFKM 126
D ++QYL+ +AEPY+ IA +P++ E K +W +W+ DTK+FFLQF +K+
Sbjct: 198 DNKYQYLVVSAEPYDNIAIVIPNKHEIDKPLEENKMSDSYWWYWDNDTKEFFLQFLYKL 256
Score = 47.2 bits (107), Expect = 2e-04
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 1 MDFQNRPGGKTGGGGVASWSESNRDRRERLRQ-LALETIDLNKDPYFMKNHLEIAE 55
MD+ R K G GG+AS + N ++R+++ L+ +D++ DPY +NHL + E
Sbjct: 1 MDYSGRVNSKKGAGGIASNEDINIQTKQRVQELLSTHVLDIDNDPYVFRNHLGMLE 56
>UniRef50_Q4FZ32 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 239
Score = 51.2 bits (117), Expect = 1e-05
Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 13/82 (15%)
Query: 55 EGVIPRHRFMSAYEQKIE-PPDRRWQYLLFAAEPYETIAFKVPSRE--------VEKHDS 105
EG P HR++SA EQ +E PPD + YLLFA E Y T+A K P++ +E+ D
Sbjct: 155 EGTRPLHRWLSAREQHVEKPPDDYFVYLLFACEGYTTVALKFPAKANRSQPRDVLEEADG 214
Query: 106 K----FWTHWNKDTKQFFLQFA 123
+W W+ K + L FA
Sbjct: 215 STSEAYWCSWDPLQKVYTLFFA 236
>UniRef50_Q8SSB4 Cluster: SPLICEOSOME-ASSOCIATED PROTEIN 62; n=1;
Encephalitozoon cuniculi|Rep: SPLICEOSOME-ASSOCIATED
PROTEIN 62 - Encephalitozoon cuniculi
Length = 185
Score = 50.8 bits (116), Expect = 2e-05
Identities = 24/73 (32%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 52 EIAEGVIPRHRFMSAYEQKIEPPDRRWQYLLFAAEPYETIAFKVPSREVEKHDSKFWTHW 111
E+AE + P++RF+++ EQ +E D ++YL+F PYE I FK ++E++ + +
Sbjct: 111 ELAEEM-PQYRFVNSLEQNVEEYDESFRYLVFVCRPYENIGFKFENKEID--ELSIYEDV 167
Query: 112 NKDTKQFFLQFAF 124
+++T + L F F
Sbjct: 168 DEETGTYTLHFYF 180
>UniRef50_Q4DJR6 Cluster: Putative uncharacterized protein; n=3;
Trypanosoma|Rep: Putative uncharacterized protein -
Trypanosoma cruzi
Length = 246
Score = 46.8 bits (106), Expect = 3e-04
Identities = 26/48 (54%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 52 EIAEGVIPRHRFMSAYEQKIE-PPDRRWQYLLFAAEPYETIAFKVPSR 98
+ A GV P HR+ SA EQ +E PPD YLL A E Y TIA K PS+
Sbjct: 145 QAAAGVRPLHRWRSAREQDMERPPDDSVVYLLVACEGYVTIAVKFPSK 192
>UniRef50_Q7R0G4 Cluster: GLP_29_31467_32135; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_29_31467_32135 - Giardia lamblia
ATCC 50803
Length = 222
Score = 38.7 bits (86), Expect = 0.072
Identities = 14/44 (31%), Positives = 27/44 (61%)
Query: 58 IPRHRFMSAYEQKIEPPDRRWQYLLFAAEPYETIAFKVPSREVE 101
IPR+R +S Y+Q IEP QY++ + PY ++ + ++ ++
Sbjct: 157 IPRYRIVSTYDQSIEPVSPDKQYIVISCHPYRSVGVCIMNQPID 200
>UniRef50_A2EI89 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 462
Score = 33.9 bits (74), Expect = 2.0
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 20 SESNRDRRERLRQLALETIDLNKDPYFMKNHLEIAEGVIPRHRFMSAYEQK 70
+E+ + R E R LETI+ K+ F +N +IAEGV ++R ++ EQ+
Sbjct: 261 NETLKSREEDRRNALLETIN-RKENQFRENRAKIAEGVQTKYREIAKNEQE 310
>UniRef50_Q5V3N9 Cluster: 8-amino-7-oxononanoate synthase; n=2;
Halobacteriaceae|Rep: 8-amino-7-oxononanoate synthase -
Haloarcula marismortui (Halobacterium marismortui)
Length = 400
Score = 33.1 bits (72), Expect = 3.6
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 42 KDPYFMKNHLEIAEGVIPRHRFMSAYEQKIEPPDRRWQYLLFAAEPYETIA 92
+D ++ HLE+AE V R RF A + K +PP+ + ++FAA Y +A
Sbjct: 14 RDAQNLRRHLEVAESVSARTRF--ADDPKGDPPEFGDEEVVFAANNYLGLA 62
>UniRef50_Q5KPQ4 Cluster: Cactin, putative; n=2; Filobasidiella
neoformans|Rep: Cactin, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 751
Score = 32.7 bits (71), Expect = 4.7
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 67 YEQKIEPPDRRWQYLLFAA-EPYETIAFKVPSREVE-KHDSKFWTHWNKDTKQFFLQFA 123
Y K P D Q ++F A PYE IAF++ R+ E H F + +++ Q + FA
Sbjct: 687 YYLKSIPDDPDTQIIVFTAGPPYEDIAFRIVRRQWEYSHRKGFRSTFDRGVLQLYFNFA 745
>UniRef50_UPI000069E630 Cluster: UPI000069E630 related cluster; n=1;
Xenopus tropicalis|Rep: UPI000069E630 UniRef100 entry -
Xenopus tropicalis
Length = 1830
Score = 32.3 bits (70), Expect = 6.2
Identities = 14/40 (35%), Positives = 27/40 (67%)
Query: 16 VASWSESNRDRRERLRQLALETIDLNKDPYFMKNHLEIAE 55
V++ S+ N++ R+R++QL+ E LNK+ ++ L +AE
Sbjct: 965 VSAHSKENKNLRDRMKQLSQERESLNKEVEELRTQLRLAE 1004
>UniRef50_Q9LU60 Cluster: Arabidopsis thaliana genomic DNA,
chromosome 5, P1 clone:MWD22; n=5; core
eudicotyledons|Rep: Arabidopsis thaliana genomic DNA,
chromosome 5, P1 clone:MWD22 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 395
Score = 32.3 bits (70), Expect = 6.2
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 43 DPYFMKNHLEIAEGVIPRHRFMSAYEQKI-EPPDRRWQYLLFAAEPYETIAFKVPSREVE 101
DP ++ H++ E I + + A E+KI P D + F+ +P T K+ + E
Sbjct: 308 DPLYLNQHIDNLETYIAKR--IDAGERKIVSPDDYVYSSEDFSIDPMCTNCPKLIPQGYE 365
Query: 102 KHDSKFWTH 110
+HD W H
Sbjct: 366 EHDEALWLH 374
>UniRef50_Q7RQA1 Cluster: Putative uncharacterized protein PY01201;
n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY01201 - Plasmodium yoelii yoelii
Length = 1493
Score = 31.9 bits (69), Expect = 8.2
Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Query: 1 MDFQNRPGGKTGG-GGVASWSESNRDRRERLRQLALETIDLNKDPY--FMKNHLEIAEG 56
MD QN G GG G + + N E L ET D++ D + F+KN LEIA G
Sbjct: 809 MDKQN--GSYNGGVGNNSEGIKFNNSHNENTLNLCNETNDIHGDNFKLFLKNRLEIAHG 865
>UniRef50_Q0TZE8 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 1214
Score = 31.9 bits (69), Expect = 8.2
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 58 IPRHRFMS--AYEQKIEPPDRRWQYLLFAAE-PYETIAFKVPSREVEKHDSKFWT-HWNK 113
IPR F++ A EQ IE +R + LF+ PY +A V V D HW+K
Sbjct: 156 IPRDFFVNPAASEQDIEGWCKRSEPTLFSGRIPYRLVAVNVDELLVALDDGAICRIHWDK 215
Query: 114 DTK 116
DTK
Sbjct: 216 DTK 218
>UniRef50_A2BJU5 Cluster: Uncharacterized conserved archaeal
protein; n=1; Hyperthermus butylicus DSM 5456|Rep:
Uncharacterized conserved archaeal protein -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 97
Score = 31.9 bits (69), Expect = 8.2
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 28 ERLRQLALETIDLNKDPYFMKNHLEIAEG-VIPRHRFMSAYEQKIEPPDRRWQ 79
ER R I N+ + +E+ +G VIP HR + ++K +P RRW+
Sbjct: 28 ERGRVSGTRLIGFNEVSRVARGFIELKDGTVIPLHRVIEVLDEKKQPVWRRWR 80
>UniRef50_Q07350 Cluster: Pre-mRNA-splicing factor PRP11; n=6;
Saccharomycetales|Rep: Pre-mRNA-splicing factor PRP11 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 266
Score = 31.9 bits (69), Expect = 8.2
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 1 MDFQNRPGGKTGGGGVASWSESNRDRRERLRQL 33
M++ G K GGGG+AS S+ N RR+ + L
Sbjct: 1 MNYLEGVGSKKGGGGIASESQFNLQRRKEVESL 33
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.321 0.136 0.439
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,355,411
Number of Sequences: 1657284
Number of extensions: 7809265
Number of successful extensions: 18413
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 18369
Number of HSP's gapped (non-prelim): 44
length of query: 173
length of database: 575,637,011
effective HSP length: 95
effective length of query: 78
effective length of database: 418,195,031
effective search space: 32619212418
effective search space used: 32619212418
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 69 (31.9 bits)
- SilkBase 1999-2023 -