GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000898-TA|BGIBMGA000898-PA|undefined
         (173 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         24   2.9  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    24   2.9  
DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein O-fucosylt...    23   3.9  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   3.9  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   5.1  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   6.8  

>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 23.8 bits (49), Expect = 2.9
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 5   NRPGGKTGGGGVASWSESNRDRRERLRQ 32
           +RPG    GG V+  S++  DRR +  Q
Sbjct: 344 SRPGSSQLGGPVSPASDAGYDRRVKQEQ 371


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 23.8 bits (49), Expect = 2.9
 Identities = 10/25 (40%), Positives = 15/25 (60%)

Query: 8   GGKTGGGGVASWSESNRDRRERLRQ 32
           GG+ GGGG +   E +   +ER R+
Sbjct: 916 GGEVGGGGGSGGEEGSGAPKERKRK 940


>DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein
           O-fucosyltransferase 1 protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 13/47 (27%), Positives = 19/47 (40%)

Query: 31  RQLALETIDLNKDPYFMKNHLEIAEGVIPRHRFMSAYEQKIEPPDRR 77
           R+  + +I +  D YF    L+    VI    FM      + PP  R
Sbjct: 65  RKGEVRSIQVPFDTYFQVGPLQAFHRVITMENFMKTLAPSLWPPAER 111


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 6/41 (14%)

Query: 8   GGKTG-GGGVASWSESNRDR-RERLRQLALE----TIDLNK 42
           GG TG GGG+ S SE N +  R++L  +  E    T ++NK
Sbjct: 203 GGGTGTGGGLVSSSEKNYNPVRKKLGSMMTENKASTFNMNK 243


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 83  FAAEPYETIAFKVPSREVEKHDSKFWTHWNKDTKQFF 119
           F    +++IA  + S+EV     K   HW  D +  F
Sbjct: 595 FNTASWKSIAMALRSKEVPASLQKLLQHWMTDRQLVF 631


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 22.6 bits (46), Expect = 6.8
 Identities = 7/17 (41%), Positives = 10/17 (58%)

Query: 78   WQYLLFAAEPYETIAFK 94
            W+ L + A PYE +  K
Sbjct: 1027 WELLTYGARPYENVPAK 1043


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.321    0.136    0.439 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,807
Number of Sequences: 2123
Number of extensions: 6409
Number of successful extensions: 18
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 13
Number of HSP's gapped (non-prelim): 6
length of query: 173
length of database: 516,269
effective HSP length: 60
effective length of query: 113
effective length of database: 388,889
effective search space: 43944457
effective search space used: 43944457
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 45 (22.2 bits)