GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000897-TA|BGIBMGA000897-PA|IPR001509|NAD-dependent
epimerase/dehydratase
         (399 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY341194-1|AAR13758.1|  294|Anopheles gambiae laminin protein.         25   4.8  
AY341193-1|AAR13757.1|  294|Anopheles gambiae laminin protein.         25   4.8  
AY341192-1|AAR13756.1|  294|Anopheles gambiae laminin protein.         25   4.8  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    25   4.8  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           24   6.4  
AF457562-1|AAL68792.1|   78|Anopheles gambiae hypothetical prote...    24   6.4  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    24   8.5  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    24   8.5  

>AY341194-1|AAR13758.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 24.6 bits (51), Expect = 4.8
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)

Query: 208 IIRASDIYGSE-DRFLRSLVNKMRSHSNLM 236
           I + ++ Y  E DR    L NKMR H+ L+
Sbjct: 157 IKKEANQYNREADRIAEDLANKMRDHAQLL 186


>AY341193-1|AAR13757.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 24.6 bits (51), Expect = 4.8
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)

Query: 208 IIRASDIYGSE-DRFLRSLVNKMRSHSNLM 236
           I + ++ Y  E DR    L NKMR H+ L+
Sbjct: 157 IKKEANQYNREADRIAEDLANKMRDHAQLL 186


>AY341192-1|AAR13756.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 24.6 bits (51), Expect = 4.8
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)

Query: 208 IIRASDIYGSE-DRFLRSLVNKMRSHSNLM 236
           I + ++ Y  E DR    L NKMR H+ L+
Sbjct: 157 IKKEANQYNREADRIAEDLANKMRDHAQLL 186


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 24.6 bits (51), Expect = 4.8
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)

Query: 208  IIRASDIYGSE-DRFLRSLVNKMRSHSNLM 236
            I + ++ Y  E DR    L NKMR H+ L+
Sbjct: 1296 IKKEANQYNREADRIAEDLANKMRDHAQLL 1325


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 24.2 bits (50), Expect = 6.4
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 160 EGVERFIHLSYLNAEEHPKPLVLKKPSAW 188
           EG   F+    L A+ HP+ +V    +AW
Sbjct: 156 EGFAEFVEAIELEAQSHPQVVVAGDFNAW 184


>AF457562-1|AAL68792.1|   78|Anopheles gambiae hypothetical
          protein 15 protein.
          Length = 78

 Score = 24.2 bits (50), Expect = 6.4
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 29 ANYSSDRKPNLAAYKRGTGGRSSFNG 54
          AN S D+K +   +  GTG R +  G
Sbjct: 42 ANKSKDKKASAPKHSLGTGARMALTG 67


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 23.8 bits (49), Expect = 8.5
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 235 LMPLYKNGLATVKQPVFVSDVAQGIVNAARDDD 267
           L+ L KN     KQ V+V DVAQG+ +   D D
Sbjct: 75  LITLNKNPQKN-KQFVYVEDVAQGVDSGLLDLD 106


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 23.8 bits (49), Expect = 8.5
 Identities = 13/47 (27%), Positives = 18/47 (38%)

Query: 98   CGDLGQVLFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNFKYND 144
            C    Q  FT YH   ++   K   Y   VI+      +  N+ Y D
Sbjct: 1871 CSGPAQAYFTEYHQKAQQHCVKPQYYFGNVISEQEAGRQRYNYYYKD 1917


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.138    0.419 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 430,655
Number of Sequences: 2123
Number of extensions: 18172
Number of successful extensions: 79
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 72
Number of HSP's gapped (non-prelim): 8
length of query: 399
length of database: 516,269
effective HSP length: 65
effective length of query: 334
effective length of database: 378,274
effective search space: 126343516
effective search space used: 126343516
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 49 (23.8 bits)