GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000897-TA|BGIBMGA000897-PA|IPR001509|NAD-dependent
epimerase/dehydratase
         (399 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3380|AAF51613.1|  416|Drosophila melanogaster CG6020-PA...   483   e-136
BT004491-1|AAO42655.1|  327|Drosophila melanogaster GM13757p pro...   406   e-113
BT029034-1|ABJ16967.1|  324|Drosophila melanogaster IP02858p pro...   361   e-100

>AE014296-3380|AAF51613.1|  416|Drosophila melanogaster CG6020-PA
           protein.
          Length = 416

 Score =  483 bits (1192), Expect = e-136
 Identities = 238/362 (65%), Positives = 271/362 (74%)

Query: 38  NLAAYKRGTGGRSSFNGIVATVFGCTGFVGRYVCNKLGKIGTQLILPYRGDFYDAQRLKV 97
           N AA KRGTGGRSSFNGIVATVFG TGFVGRYVCNKLGK GTQ+ILPYRGD  D  RLKV
Sbjct: 47  NPAAMKRGTGGRSSFNGIVATVFGATGFVGRYVCNKLGKSGTQMILPYRGDDSDVIRLKV 106

Query: 98  CGDLGQVLFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNFKYNDVHVDGVRRIARIC 157
            GDLGQVLF  Y+L D  SI  AV++SNVVINLVGRD+ETKNFK+ DVHV+G  RIARI 
Sbjct: 107 TGDLGQVLFHFYNLEDPASIRDAVKHSNVVINLVGRDFETKNFKFKDVHVNGAERIARIA 166

Query: 158 REEGVERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDIYGS 217
           RE GVER IHLS LN E +PK L +K  S W  SKY GE  VR+ +P ATIIR +DIYGS
Sbjct: 167 REAGVERLIHLSSLNVEANPKDLYVKGGSEWLKSKYEGELRVRDAFPNATIIRPADIYGS 226

Query: 218 EDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPVFVSDVAQGIVNAARDDDTKCEVYQAVG 277
           EDRFLR   +  R     MPL+  G  TVKQPV+VSDVAQ I+NAA+D D+   +YQAVG
Sbjct: 227 EDRFLRYYAHIWRRQFRSMPLWHKGEKTVKQPVYVSDVAQAIINAAKDPDSAGRIYQAVG 286

Query: 278 PKRYLLADLVDWFYKLMRKDEKWGGYIRYDMKYDPILPLKVALVNAISPAYPLGNLHWEG 337
           PKRY L++LVDWF++LMRKD+K  GY+RYDM++DP   LK  L + I P  P+G LH   
Sbjct: 287 PKRYQLSELVDWFHRLMRKDQKRWGYMRYDMRWDPTFLLKAKLNSFICPGTPIGGLHPAR 346

Query: 338 IEREATSDNVVIGVPTLEDLGVTLTHMEDQVPWELKPFRAHQYYMDRLGEFPKPDPPPVY 397
           IEREA +D V+ GVPTLEDLGVTLT ME QVPWEL+P+RA  YY   LGEF  P PP   
Sbjct: 347 IEREAVTDKVLTGVPTLEDLGVTLTTMEQQVPWELRPYRAALYYDAELGEFETPSPPKCI 406

Query: 398 SA 399
            A
Sbjct: 407 EA 408


>BT004491-1|AAO42655.1|  327|Drosophila melanogaster GM13757p
           protein.
          Length = 327

 Score =  406 bits (999), Expect = e-113
 Identities = 200/319 (62%), Positives = 233/319 (73%)

Query: 81  LILPYRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNF 140
           +ILPYRGD  D  RLKV GDLGQVLF  Y+L D  SI  AV++SNVVINLVGRD+ETKNF
Sbjct: 1   MILPYRGDDSDVIRLKVTGDLGQVLFHFYNLEDPASIRDAVKHSNVVINLVGRDFETKNF 60

Query: 141 KYNDVHVDGVRRIARICREEGVERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVR 200
           K+ DVHV+G  RIARI RE GVERFIHLS LN E +PK L +K  S W  SKY GE  VR
Sbjct: 61  KFKDVHVNGAERIARIAREAGVERFIHLSSLNVEANPKDLYVKGGSEWLKSKYEGELRVR 120

Query: 201 EEYPTATIIRASDIYGSEDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPVFVSDVAQGIV 260
           + +P ATIIR +DIYGSEDRFLR   +  R     MPL+  G  TVKQPV+VSDVAQ I+
Sbjct: 121 DAFPNATIIRPADIYGSEDRFLRYYAHIWRRQFRSMPLWHKGEKTVKQPVYVSDVAQAII 180

Query: 261 NAARDDDTKCEVYQAVGPKRYLLADLVDWFYKLMRKDEKWGGYIRYDMKYDPILPLKVAL 320
           NAA+D D+   +YQAVGPKRY L++LVDWF++LMRKD+K  GY+RYDM++DP   LK  L
Sbjct: 181 NAAKDPDSAGRIYQAVGPKRYQLSELVDWFHRLMRKDQKRWGYMRYDMRWDPTFLLKAKL 240

Query: 321 VNAISPAYPLGNLHWEGIEREATSDNVVIGVPTLEDLGVTLTHMEDQVPWELKPFRAHQY 380
            + I P  P+G LH   IEREA +D V+ GVPTLEDLGVTLT ME QVPWEL+P+RA  Y
Sbjct: 241 NSFICPGTPIGGLHPARIEREAVTDKVLTGVPTLEDLGVTLTTMEQQVPWELRPYRAALY 300

Query: 381 YMDRLGEFPKPDPPPVYSA 399
           Y   LGEF  P PP    A
Sbjct: 301 YDAELGEFETPSPPKCIEA 319


>BT029034-1|ABJ16967.1|  324|Drosophila melanogaster IP02858p
           protein.
          Length = 324

 Score =  361 bits (889), Expect = e-100
 Identities = 176/284 (61%), Positives = 207/284 (72%)

Query: 116 SIAKAVRYSNVVINLVGRDYETKNFKYNDVHVDGVRRIARICREEGVERFIHLSYLNAEE 175
           SI  AV++SNVVINLVGRD+ETKNFK+ DVHV+G  RIARI RE GVER IHLS LN E 
Sbjct: 33  SIRDAVKHSNVVINLVGRDFETKNFKFKDVHVNGAERIARIAREAGVERLIHLSSLNVEA 92

Query: 176 HPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDIYGSEDRFLRSLVNKMRSHSNL 235
           +PK L +K  S W  SKY GE  VR+ +P ATIIR +DIYGSEDRFLR   +  R     
Sbjct: 93  NPKDLYVKGGSEWLKSKYEGELRVRDAFPNATIIRPADIYGSEDRFLRYYAHIWRRQFRS 152

Query: 236 MPLYKNGLATVKQPVFVSDVAQGIVNAARDDDTKCEVYQAVGPKRYLLADLVDWFYKLMR 295
           MPL+  G  TVKQPV+VSDVAQ I+NAA+D D+   +YQAVGPKRY L++LVDWF++LMR
Sbjct: 153 MPLWHKGEKTVKQPVYVSDVAQAIINAAKDPDSAGRIYQAVGPKRYQLSELVDWFHRLMR 212

Query: 296 KDEKWGGYIRYDMKYDPILPLKVALVNAISPAYPLGNLHWEGIEREATSDNVVIGVPTLE 355
           KD+K  GY+RYDM++DP   LK  L + I P  P+G LH   IEREA +D V+ GVPTLE
Sbjct: 213 KDQKRWGYMRYDMRWDPTFLLKAKLNSFICPGTPIGGLHPARIEREAVTDKVLTGVPTLE 272

Query: 356 DLGVTLTHMEDQVPWELKPFRAHQYYMDRLGEFPKPDPPPVYSA 399
           DLGVTLT ME QVPWEL+P+RA  YY   LGEF  P PP    A
Sbjct: 273 DLGVTLTTMEQQVPWELRPYRAALYYDAELGEFETPSPPKCIEA 316


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.320    0.138    0.419 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,251,843
Number of Sequences: 52641
Number of extensions: 889818
Number of successful extensions: 1690
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1687
Number of HSP's gapped (non-prelim): 3
length of query: 399
length of database: 24,830,863
effective HSP length: 87
effective length of query: 312
effective length of database: 20,251,096
effective search space: 6318341952
effective search space used: 6318341952
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 63 (29.5 bits)