BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA000896-TA|BGIBMGA000896-PA|IPR002524|Cation efflux protein, IPR013032|EGF-like region, IPR003571|Snake toxin (322 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At2g04620.1 68415.m00470 cation efflux family protein potential ... 56 2e-08 At2g46800.2 68415.m05840 zinc transporter (ZAT) identical to zin... 47 1e-05 At2g46800.1 68415.m05839 zinc transporter (ZAT) identical to zin... 47 1e-05 At3g61940.1 68416.m06956 zinc transporter, putative similar to z... 43 2e-04 At3g58810.2 68416.m06555 zinc transporter, putative similar to z... 43 3e-04 At3g58810.1 68416.m06554 zinc transporter, putative similar to z... 43 3e-04 At2g29410.1 68415.m03574 zinc transporter, putative similar to z... 39 0.005 At1g01440.1 68414.m00059 extra-large G-protein-related weak simi... 30 1.8 At5g66830.1 68418.m08426 F-box family protein contains F-box dom... 30 2.4 At5g10180.1 68418.m01178 sulfate transporter identical to sulfat... 29 3.2 At4g15360.1 68417.m02348 cytochrome P450 family protein 29 4.2 At4g02220.1 68417.m00300 zinc finger (MYND type) family protein ... 29 4.2 At1g33020.1 68414.m04066 F-box family protein 29 4.2 At5g43990.2 68418.m05382 SET domain-containing protein identical... 28 7.3 At5g43990.1 68418.m05383 SET domain-containing protein identical... 28 7.3 At5g50375.1 68418.m06239 cyclopropyl isomerase (CPI1) 28 9.6 At1g67140.1 68414.m07638 expressed protein 28 9.6 >At2g04620.1 68415.m00470 cation efflux family protein potential member of the cation diffusion facilitator (CDF) family, or cation efflux (CE) family, see PMID:11500563 Length = 798 Score = 56.4 bits (130), Expect = 2e-08 Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 4/109 (3%) Query: 168 IADPALSACAAIVLVVFNYPFMRSAGLVLLQTVPEGLGACDLRTAA---LRVPGVFAIHE 224 +ADPA S +I+++ P +R++ +LLQ VP DL+ A L+ GV +I Sbjct: 687 VADPASSIFISILIIASVIPLLRNSAEILLQRVPRAHRQ-DLKEAMRNILKTKGVCSIQR 745 Query: 225 LHVWQLHRDKVVATAHVIYGTHEDYLKNSALVCDVFKRHGIGLVTLQPE 273 LHVW VVAT H++ D V + + G+ TLQ E Sbjct: 746 LHVWSFTNSDVVATLHLLVSADSDKTDTKLQVSRLLEDAGVKDWTLQVE 794 >At2g46800.2 68415.m05840 zinc transporter (ZAT) identical to zinc transporter ZAT [Arabidopsis thaliana] gi|4206640|gb|AAD11757; member of the cation diffusion facilitator (CDF) family, or cation efflux (CE) family, PMID:11500563 Length = 398 Score = 47.2 bits (107), Expect = 1e-05 Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 1/114 (0%) Query: 161 WEHEASRIADPALSACAAIVLVVFNYPFMRSAGLVLLQTVPEGLGACDLRTAALRVPGVF 220 W + +I D + +++++ +R+ VL+++ P + A L L + V Sbjct: 284 WYNPEWKIVDLICTLAFSVIVLGTTINMIRNILEVLMESTPREIDATKLEKGLLEMEEVV 343 Query: 221 AIHELHVWQLHRDKVVATAHVIYGTHEDYLKNSALVCDVFKR-HGIGLVTLQPE 273 A+HELH+W + KV+ HV D V D +R + I VT+Q E Sbjct: 344 AVHELHIWAITVGKVLLACHVNIRPEADADMVLNKVIDYIRREYNISHVTIQIE 397 Score = 27.9 bits (59), Expect = 9.6 Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 6/56 (10%) Query: 37 NSPTLLVDTCHSLCRLVGLITTLISFKYERADEGTGREGRLRNTFGWARIEVVGRL 92 NS +L D H L + +L S G E R T+G+ RIE++G L Sbjct: 80 NSLAILTDAAHLLSDVAAFAISLFSLW------AAGWEATPRQTYGFFRIEILGAL 129 >At2g46800.1 68415.m05839 zinc transporter (ZAT) identical to zinc transporter ZAT [Arabidopsis thaliana] gi|4206640|gb|AAD11757; member of the cation diffusion facilitator (CDF) family, or cation efflux (CE) family, PMID:11500563 Length = 398 Score = 47.2 bits (107), Expect = 1e-05 Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 1/114 (0%) Query: 161 WEHEASRIADPALSACAAIVLVVFNYPFMRSAGLVLLQTVPEGLGACDLRTAALRVPGVF 220 W + +I D + +++++ +R+ VL+++ P + A L L + V Sbjct: 284 WYNPEWKIVDLICTLAFSVIVLGTTINMIRNILEVLMESTPREIDATKLEKGLLEMEEVV 343 Query: 221 AIHELHVWQLHRDKVVATAHVIYGTHEDYLKNSALVCDVFKR-HGIGLVTLQPE 273 A+HELH+W + KV+ HV D V D +R + I VT+Q E Sbjct: 344 AVHELHIWAITVGKVLLACHVNIRPEADADMVLNKVIDYIRREYNISHVTIQIE 397 Score = 27.9 bits (59), Expect = 9.6 Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 6/56 (10%) Query: 37 NSPTLLVDTCHSLCRLVGLITTLISFKYERADEGTGREGRLRNTFGWARIEVVGRL 92 NS +L D H L + +L S G E R T+G+ RIE++G L Sbjct: 80 NSLAILTDAAHLLSDVAAFAISLFSLW------AAGWEATPRQTYGFFRIEILGAL 129 >At3g61940.1 68416.m06956 zinc transporter, putative similar to zinc transporter ZAT [Arabidopsis thaliana] gi|4206640|gb|AAD11757; similar to zinc transporter ZnT-2 [Rattus norvegicus] gi|1256378|gb|AAB02775; member of the cation diffusion facilitator (CDF) family, or cation efflux (CE) family, PMID:11500563 Length = 334 Score = 43.2 bits (97), Expect = 2e-04 Identities = 24/114 (21%), Positives = 55/114 (48%), Gaps = 1/114 (0%) Query: 161 WEHEASRIADPALSACAAIVLVVFNYPFMRSAGLVLLQTVPEGLGACDLRTAALRVPGVF 220 W + ++ D + +++++ +RS VL+++ P + A L + + V Sbjct: 220 WYNPKWKVIDLICTLFFSVIVLGTTIKMLRSILEVLMESTPREIDARQLEKGLMEIEEVV 279 Query: 221 AIHELHVWQLHRDKVVATAHV-IYGTHEDYLKNSALVCDVFKRHGIGLVTLQPE 273 +HELH+W + K + + HV + D + + ++ +++ + I VT+Q E Sbjct: 280 DVHELHIWAITVGKALFSCHVKVRPEAGDEMVLNKVIDYIWREYRISHVTIQIE 333 >At3g58810.2 68416.m06555 zinc transporter, putative similar to zinc transporter 4; ZnT4 [Mus musculus] gi|2582990|gb|AAB82593; similar to zinc transporter ZAT [Arabidopsis thaliana] gi|4206640|gb|AAD11757; member of the cation diffusion facilitator (CDF) family, or cation efflux (CE) family, PMID:11500563 Length = 393 Score = 42.7 bits (96), Expect = 3e-04 Identities = 27/114 (23%), Positives = 49/114 (42%), Gaps = 1/114 (0%) Query: 161 WEHEASRIADPALSACAAIVLVVFNYPFMRSAGLVLLQTVPEGLGACDLRTAALRVPGVF 220 W +I D + +++++ +R+ VL+++ P + L + V Sbjct: 278 WYKPEWKILDLICTLVFSVIVLGTTIGMLRNILEVLMESTPREIDPTMLEKGVCEIEEVV 337 Query: 221 AIHELHVWQLHRDKVVATAHVIYGTHEDYLKNSALVCDVFKR-HGIGLVTLQPE 273 A+HELH+W + K++ HV + + D KR H I VT+Q E Sbjct: 338 AVHELHIWAITVGKLLLACHVKIRPEAEADMVLDKIIDYIKREHNISHVTIQIE 391 >At3g58810.1 68416.m06554 zinc transporter, putative similar to zinc transporter 4; ZnT4 [Mus musculus] gi|2582990|gb|AAB82593; similar to zinc transporter ZAT [Arabidopsis thaliana] gi|4206640|gb|AAD11757; member of the cation diffusion facilitator (CDF) family, or cation efflux (CE) family, PMID:11500563 Length = 432 Score = 42.7 bits (96), Expect = 3e-04 Identities = 27/114 (23%), Positives = 49/114 (42%), Gaps = 1/114 (0%) Query: 161 WEHEASRIADPALSACAAIVLVVFNYPFMRSAGLVLLQTVPEGLGACDLRTAALRVPGVF 220 W +I D + +++++ +R+ VL+++ P + L + V Sbjct: 317 WYKPEWKILDLICTLVFSVIVLGTTIGMLRNILEVLMESTPREIDPTMLEKGVCEIEEVV 376 Query: 221 AIHELHVWQLHRDKVVATAHVIYGTHEDYLKNSALVCDVFKR-HGIGLVTLQPE 273 A+HELH+W + K++ HV + + D KR H I VT+Q E Sbjct: 377 AVHELHIWAITVGKLLLACHVKIRPEAEADMVLDKIIDYIKREHNISHVTIQIE 430 >At2g29410.1 68415.m03574 zinc transporter, putative similar to zinc transporter ZAT [Arabidopsis thaliana] gi|4206640|gb|AAD11757; similar to zinc transporter ZnT-2 [Rattus norvegicus] gi|1256378|gb|AAB02775; member of the cation diffusion facilitator (CDF) family, or cation efflux (CE) family, PMID:11500563 Length = 375 Score = 38.7 bits (86), Expect = 0.005 Identities = 14/56 (25%), Positives = 32/56 (57%) Query: 187 PFMRSAGLVLLQTVPEGLGACDLRTAALRVPGVFAIHELHVWQLHRDKVVATAHVI 242 P +++ +L++ VP + L R+ GV +++LHVW++ ++V + H++ Sbjct: 286 PILKNIFGILMERVPRDMDIEKLERGLKRIDGVKIVYDLHVWEITVGRIVLSCHIL 341 Score = 31.9 bits (69), Expect = 0.59 Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 7/63 (11%) Query: 37 NSPTLLVDTCHSLCRLVGLITTLISFKYERADEGTGREGRLRNTFGWARIEVVGR-LSVH 95 NS ++ D H L + GL +L++ K + E RN+FG+ R+EV+ LSV Sbjct: 80 NSLAVMTDAAHLLSDVAGLCVSLLAIKV------SSWEANPRNSFGFKRLEVLAAFLSVQ 133 Query: 96 VLF 98 +++ Sbjct: 134 LIW 136 >At1g01440.1 68414.m00059 extra-large G-protein-related weak similarity to extra-large G-protein (AtXLG1) (GI:3201682) [Arabidopsis thaliana] Length = 664 Score = 30.3 bits (65), Expect = 1.8 Identities = 13/30 (43%), Positives = 17/30 (56%) Query: 95 HVLFASFALALVVNALQLGVHSSHGPPPRY 124 H+L A VV+ +G H+ HGPPP Y Sbjct: 98 HLLRGGGNNATVVDQPPMGFHAHHGPPPSY 127 >At5g66830.1 68418.m08426 F-box family protein contains F-box domain Pfam:PF00646 Length = 394 Score = 29.9 bits (64), Expect = 2.4 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 248 DYLKNSALVCDVFKRHGIGLVTLQPEFMLTSS-RGTEEEKKELIAYG 293 D+ N+ + D+ R I L LQPEF LT T+E+ K+ + G Sbjct: 124 DHQCNNLYILDLLTRERINLPILQPEFGLTCPILWTDEKSKDHLVIG 170 >At5g10180.1 68418.m01178 sulfate transporter identical to sulfate transporter [Arabidopsis thaliana] GI:2114104 Length = 677 Score = 29.5 bits (63), Expect = 3.2 Identities = 32/134 (23%), Positives = 60/134 (44%), Gaps = 6/134 (4%) Query: 140 AINYMLLAGSLFVIAAGLTEEWEHEASRIADPALSACAAIVLVVFNYPFMRSAGLVLLQT 199 AI +M + GS F T + A A +A + IV+ V + + +L T Sbjct: 400 AIGFMNVLGS-FTSCYAATGSFSRTAVNFAAGCETAMSNIVMAVTVFVALECLTRLLYYT 458 Query: 200 VPEGLGACDLRTAALRVPGVFAIHE-LHVWQLHRDKVVATAHVIYGTHEDYLKNSALVCD 258 P + A + +A +PG+ I+E +H+W++ + +A +G ++ LV Sbjct: 459 -PIAILASIILSA---LPGLININEAIHIWKVDKFDFLALIGAFFGVLFASVEIGLLVAV 514 Query: 259 VFKRHGIGLVTLQP 272 V I L++++P Sbjct: 515 VISFAKIILISIRP 528 >At4g15360.1 68417.m02348 cytochrome P450 family protein Length = 435 Score = 29.1 bits (62), Expect = 4.2 Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 2/32 (6%) Query: 271 QPEFMLTSSRGTEEEKKEL--IAYGNLGCSCP 300 +PE LTSSR EE++KEL + +G+ CP Sbjct: 329 KPERFLTSSRSGEEDEKELKFLPFGSGRRGCP 360 >At4g02220.1 68417.m00300 zinc finger (MYND type) family protein / programmed cell death 2 C-terminal domain-containing protein similar to SP|Q16342 Programmed cell death protein 2 (Zinc finger protein Rp-8) {Homo sapiens}; contains Pfam profiles PF01753: MYND finger, PF04194: Programmed cell death protein 2, C-terminal putative domain Length = 418 Score = 29.1 bits (62), Expect = 4.2 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Query: 272 PEFMLTSSRGTEEEKKELIAYGNLGCS-CPCVKECTGPRCCEPPNIPPII 320 PE +L SR + + IA G + S P K C GPRC E +P ++ Sbjct: 323 PEQVLRYSRSSGAKPLWPIASGRVSKSELPSCKSCGGPRCFEFQVMPQLL 372 >At1g33020.1 68414.m04066 F-box family protein Length = 548 Score = 29.1 bits (62), Expect = 4.2 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 3/55 (5%) Query: 219 VFAIHELHVWQLHRDKVVATAHVIYGTHEDYLKNSALVCDVFKRHGIGLVTLQPE 273 V A+HELH+W + KV + V D V + KRH VT+Q E Sbjct: 492 VTAVHELHIWSITVGKVSLASQVSIKPEADTDAILDKVIEYIKRHH---VTIQVE 543 >At5g43990.2 68418.m05382 SET domain-containing protein identical to SET domain protein SUVR2 [Arabidopsis thaliana] GI:15290521; contains Pfam profiles PF00856: SET domain, PF05033: Pre-SET motif; identical to cDNA SET domain protein SUVR2 GI:15290520 Length = 740 Score = 28.3 bits (60), Expect = 7.3 Identities = 15/40 (37%), Positives = 21/40 (52%) Query: 181 LVVFNYPFMRSAGLVLLQTVPEGLGACDLRTAALRVPGVF 220 L VF P R GL L+ +P+G C+L L +P +F Sbjct: 575 LQVFFTPNGRGWGLRTLEKLPKGAFVCELAGEILTIPELF 614 >At5g43990.1 68418.m05383 SET domain-containing protein identical to SET domain protein SUVR2 [Arabidopsis thaliana] GI:15290521; contains Pfam profiles PF00856: SET domain, PF05033: Pre-SET motif; identical to cDNA SET domain protein SUVR2 GI:15290520 Length = 717 Score = 28.3 bits (60), Expect = 7.3 Identities = 15/40 (37%), Positives = 21/40 (52%) Query: 181 LVVFNYPFMRSAGLVLLQTVPEGLGACDLRTAALRVPGVF 220 L VF P R GL L+ +P+G C+L L +P +F Sbjct: 552 LQVFFTPNGRGWGLRTLEKLPKGAFVCELAGEILTIPELF 591 >At5g50375.1 68418.m06239 cyclopropyl isomerase (CPI1) Length = 280 Score = 27.9 bits (59), Expect = 9.6 Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Query: 134 IGLLFNAINYMLLAGSLFVIAAGLTEEWEHEASRIADPALSACAAIVLVV 183 +G LF AI +++ F + T+EW + SR+A AL A + +++ Sbjct: 204 VGCLFYAIYFIVSFPMFFRMDEKSTDEW--DLSRVAVDALGAAMLVTIIL 251 >At1g67140.1 68414.m07638 expressed protein Length = 2158 Score = 27.9 bits (59), Expect = 9.6 Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 1/57 (1%) Query: 157 LTEEWEHEASRIADPALSACAAIV-LVVFNYPFMRSAGLVLLQTVPEGLGACDLRTA 212 L E + H +I + + LV FN F+R +LL EG G TA Sbjct: 130 LGELYRHFGKKITSGLFETTSIVTKLVKFNEDFVRQEAFILLHNALEGCGGTAAATA 186 Database: arabidopsis Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.325 0.139 0.441 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 7,316,560 Number of Sequences: 28952 Number of extensions: 280697 Number of successful extensions: 717 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 703 Number of HSP's gapped (non-prelim): 20 length of query: 322 length of database: 12,070,560 effective HSP length: 81 effective length of query: 241 effective length of database: 9,725,448 effective search space: 2343832968 effective search space used: 2343832968 T: 11 A: 40 X1: 15 ( 7.0 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.6 bits) S2: 59 (27.9 bits)
- SilkBase 1999-2023 -