GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000896-TA|BGIBMGA000896-PA|IPR002524|Cation efflux
protein, IPR013032|EGF-like region, IPR003571|Snake toxin
         (322 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   2.3  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   6.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   6.9  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   9.1  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   9.1  

>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 8/25 (32%), Positives = 13/25 (52%)

Query: 75  GRLRNTFGWARIEVVGRLSVHVLFA 99
           G   + FGW  + + GR  + +L A
Sbjct: 230 GLFNDIFGWPLVFITGRFVIKILVA 254


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 11/23 (47%), Positives = 13/23 (56%)

Query: 157 LTEEWEHEASRIADPALSACAAI 179
           L E +E EA  I  PAL   AA+
Sbjct: 229 LREAFEAEAQEIKKPALLLSAAV 251


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 10/32 (31%), Positives = 16/32 (50%)

Query: 225 LHVWQLHRDKVVATAHVIYGTHEDYLKNSALV 256
           + V  L+   VV   HV Y T ++  K+  L+
Sbjct: 912 IFVSTLYTANVVCICHVCYSTIQEVSKSGELI 943


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 8/17 (47%), Positives = 13/17 (76%)

Query: 136 LLFNAINYMLLAGSLFV 152
           L+F  IN+++L G L+V
Sbjct: 218 LVFITINFVVLLGDLYV 234


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 11/40 (27%), Positives = 17/40 (42%)

Query: 255 LVCDVFKRHGIGLVTLQPEFMLTSSRGTEEEKKELIAYGN 294
           ++CD   +     + L  E        T EEK+EL  + N
Sbjct: 272 ILCDCVVKEAQKSLVLTYEMRWYCQTATMEEKQELYEFSN 311


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.325    0.139    0.441 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,709
Number of Sequences: 317
Number of extensions: 2754
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 6
length of query: 322
length of database: 114,650
effective HSP length: 57
effective length of query: 265
effective length of database: 96,581
effective search space: 25593965
effective search space used: 25593965
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 43 (21.4 bits)