Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000896-TA|BGIBMGA000896-PA|IPR002524|Cation efflux
protein, IPR013032|EGF-like region, IPR003571|Snake toxin
(322 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_24101| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 1e-13
SB_33717| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_47415| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 4e-04
SB_28048| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-04
SB_7396| Best HMM Match : DUF1634 (HMM E-Value=2.4) 37 0.019
SB_39846| Best HMM Match : SIR2 (HMM E-Value=1.4013e-45) 29 3.9
SB_59302| Best HMM Match : Collagen (HMM E-Value=0) 29 6.7
SB_34123| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.7
SB_43261| Best HMM Match : TSP_1 (HMM E-Value=0.0026) 28 8.9
>SB_24101| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 519
Score = 74.1 bits (174), Expect = 1e-13
Identities = 51/173 (29%), Positives = 88/173 (50%), Gaps = 19/173 (10%)
Query: 148 GSLFVIAAGLTEEWEH-EASRIADPALSACAAIVLVVFNYPFMRSAGLVLLQTVPEGLGA 206
GS+ V+ +G ++ + + DP +S +++ + P MR + L+LLQTVP +
Sbjct: 233 GSVIVMVSGFIIKYASGKWTLYVDPGMSILLVCLILRTSIPLMRESSLILLQTVPTHIKI 292
Query: 207 CDLRTAALR-VPGVFAIHELHVWQLHRDKVV------------ATAHVIYGTHEDYLKNS 253
+++ L V GV ++HE HVWQL DK++ A+AH+ T ++Y+ +
Sbjct: 293 KEVQDRLLDYVDGVLSVHEFHVWQLAGDKIIGLINTMLSLSLPASAHITCHTPDEYMAIA 352
Query: 254 ALVCDVFKRHGIGLVTLQPEFMLTSSRGTEEEKKELIAYGNLGCSCPCVKECT 306
+ F GI T+QPEF+ T ++++ ++A G SC K CT
Sbjct: 353 NQIKQFFHNEGIHSTTIQPEFV----EDTLKKEECVLACGE-SASCAAQKCCT 400
Score = 46.0 bits (104), Expect = 4e-05
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 36 TNSPTLLVDTCHSLCRLVGLITTLISFKYERADEGTGREGRLRNTFGWARIEVVGRLSVH 95
TNS L+ D+ H L ++ LI + +Y + + T R NTFGW R EV+G L
Sbjct: 39 TNSMALVADSFHMLSDVMSLIIGYFALRYSKKSQRTER-----NTFGWQRAEVLGALVNA 93
Query: 96 VLFASFALALVVNALQ 111
V + +++V +L+
Sbjct: 94 VFLIALCFSILVESLK 109
>SB_33717| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 60.5 bits (140), Expect = 2e-09
Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Query: 149 SLFVIAAGLTEEWEHEASRIADPALSACAAIVLVVFNYPFMRSAGLVLLQTVPEGLGACD 208
SL V A L W IADP + +I+++ ++ A +VL++ +P+GL D
Sbjct: 197 SLGVFVAALII-WFKPEWAIADPICTFIFSIIVLFTTLAILKDALIVLMEGMPKGLSFND 255
Query: 209 LRTAALRVPGVFAIHELHVWQLHRDKVVATAHVIY---GTHEDYLKNSALVC 257
L+T+ +PGV A+H+LHVW L + H++ +D L+ ++ VC
Sbjct: 256 LKTSLTAIPGVEAVHDLHVWSLTVGTDALSVHLVVDNSANTQDILEAASQVC 307
Score = 31.1 bits (67), Expect = 1.3
Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 9/112 (8%)
Query: 34 HFTNSPTLLVDTCHSLCRLVGLITTLISFKYERADEGTGREGRLRNTFGWARIEVVGR-L 92
+F+NS ++ D H L G + +L + R ++GW R EV+G L
Sbjct: 31 YFSNSLAIMTDAAHMLSDFAGFMISLFAIWV------ATRPATKTLSYGWYRAEVMGAVL 84
Query: 93 SVHVLFASFALALVVNALQLGVHSSHGPPPRYPRVIV-GSAVIGLLFNAINY 143
SV V++ + LV ALQ + + + + G +I ++ AI Y
Sbjct: 85 SVLVIWVLTGV-LVYMALQRLIMKEYEVDAKVMLITASGGLLINVIMGAILY 135
>SB_47415| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 584
Score = 42.7 bits (96), Expect = 4e-04
Identities = 19/78 (24%), Positives = 38/78 (48%)
Query: 167 RIADPALSACAAIVLVVFNYPFMRSAGLVLLQTVPEGLGACDLRTAALRVPGVFAIHELH 226
++ADP + +I++++ +R VL++ P+ + ++ + GV A H LH
Sbjct: 343 KLADPICTFLFSILVLITTLNIVRDTIHVLMEGTPKNVNYNAVKAGLENIQGVVAAHSLH 402
Query: 227 VWQLHRDKVVATAHVIYG 244
+W L +K H+ G
Sbjct: 403 IWSLTVNKAALAVHLAIG 420
>SB_28048| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 125
Score = 41.9 bits (94), Expect = 7e-04
Identities = 19/74 (25%), Positives = 38/74 (51%)
Query: 169 ADPALSACAAIVLVVFNYPFMRSAGLVLLQTVPEGLGACDLRTAALRVPGVFAIHELHVW 228
AD S A++++V Y +R + +L + VP + +++ + V + H +HVW
Sbjct: 6 ADAICSLVGAVIVLVTTYAVIRDSFNILFEGVPRDVRIAEVKRDLSTLHHVVSFHNVHVW 65
Query: 229 QLHRDKVVATAHVI 242
L + + TAH++
Sbjct: 66 ALTSGRNLLTAHLV 79
>SB_7396| Best HMM Match : DUF1634 (HMM E-Value=2.4)
Length = 119
Score = 37.1 bits (82), Expect = 0.019
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Query: 168 IADPALSACAAIVLVVFNYPFMRSAGLVLLQTVPEGL--GACDLRTAALRVPGVFAIHEL 225
IADP S A ++ + P ++ + LVLLQ P + L GV + +
Sbjct: 30 IADPVCSLFIASLIFLSVLPLLKESSLVLLQRTPLDMEKSLTGALNKILSFDGVLSFRDH 89
Query: 226 HVWQLHRDKVVATAHV 241
H WQ V T HV
Sbjct: 90 HFWQHSESVVCGTIHV 105
>SB_39846| Best HMM Match : SIR2 (HMM E-Value=1.4013e-45)
Length = 427
Score = 29.5 bits (63), Expect = 3.9
Identities = 34/116 (29%), Positives = 46/116 (39%), Gaps = 10/116 (8%)
Query: 201 PEGLGACDLRTAALRVPGVFAIHE-----LHVWQLHRDKVVATAHVIYGTHED--YLKNS 253
P GA D+ TA V IH+ LH DK A ++ ++ Y+K
Sbjct: 13 PAAGGAMDINTALQEVLKTALIHDGLSRGLHEAAKSLDKREAHLCILSNNCDEAMYVKLV 72
Query: 254 ALVCDVFKRHGIGLVTLQPEFMLTSSRGTEEEKKELIAYGNLGCSCPCVKECTGPR 309
+C HGI L+ + L G + KE A +GCSC VK G R
Sbjct: 73 EALC---AEHGIPLLKVDDSKKLGEWAGLCKIDKEGKARKVVGCSCVVVKRWHGLR 125
>SB_59302| Best HMM Match : Collagen (HMM E-Value=0)
Length = 993
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Query: 286 KKELIAYGNLGCSCPCVKECTGPRCCEPPNIPP 318
K+E + G GC+ C CT CCE P PP
Sbjct: 3 KREADSCGG-GCAAECAPACT-LSCCETPPPPP 33
>SB_34123| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 258
Score = 28.7 bits (61), Expect = 6.7
Identities = 16/65 (24%), Positives = 33/65 (50%)
Query: 107 VNALQLGVHSSHGPPPRYPRVIVGSAVIGLLFNAINYMLLAGSLFVIAAGLTEEWEHEAS 166
+ AL + PP + P+VI+ ++ ++FN + +M+L V ++ L + +E
Sbjct: 145 IRALACADSNGFPPPSKLPKVIITISIATVIFNNVLFMVLLHYSGVSSSFLFVLFGNENM 204
Query: 167 RIADP 171
+A P
Sbjct: 205 TLAGP 209
>SB_43261| Best HMM Match : TSP_1 (HMM E-Value=0.0026)
Length = 649
Score = 28.3 bits (60), Expect = 8.9
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 253 SALVCDVFKRHGIGLVTLQPEFMLTSSRGTEEEKKELIAYGNLGCSCPCVKECTG 307
+++ C+ +R +G V L T + E+ L GC CPC+K +G
Sbjct: 53 ASVKCNKRQRRDVGTVYLVAVTNATLQKRENAEQSTLKDRQTGGCYCPCLKRNSG 107
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.325 0.139 0.441
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,333,701
Number of Sequences: 59808
Number of extensions: 385979
Number of successful extensions: 1051
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1038
Number of HSP's gapped (non-prelim): 11
length of query: 322
length of database: 16,821,457
effective HSP length: 82
effective length of query: 240
effective length of database: 11,917,201
effective search space: 2860128240
effective search space used: 2860128240
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 60 (28.3 bits)
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