Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000896-TA|BGIBMGA000896-PA|IPR002524|Cation efflux
protein, IPR013032|EGF-like region, IPR003571|Snake toxin
(322 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021480-3|CAA16328.1| 410|Caenorhabditis elegans Hypothetical ... 59 5e-09
AL021480-2|CAA16327.1| 391|Caenorhabditis elegans Hypothetical ... 59 5e-09
U23529-12|AAL13323.1| 561|Caenorhabditis elegans Cation diffusi... 46 5e-05
U23529-11|AAK39165.1| 519|Caenorhabditis elegans Cation diffusi... 46 5e-05
Z68119-3|CAA92193.1| 382|Caenorhabditis elegans Hypothetical pr... 42 6e-04
U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to tran... 40 0.002
U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to tran... 40 0.002
AL132876-3|CAD21657.2| 746|Caenorhabditis elegans Hypothetical ... 39 0.005
AF000196-4|AAC24254.2| 429|Caenorhabditis elegans Hypothetical ... 31 1.1
AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (... 31 1.5
L12018-1|AAA65458.1| 518|Caenorhabditis elegans Polk (dna polym... 29 5.9
AF067943-4|AAC17661.1| 359|Caenorhabditis elegans Hypothetical ... 29 5.9
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 28 7.8
>AL021480-3|CAA16328.1| 410|Caenorhabditis elegans Hypothetical
protein Y39E4A.2b protein.
Length = 410
Score = 58.8 bits (136), Expect = 5e-09
Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 11/163 (6%)
Query: 113 GVHSSHGPPPRYPRVIVGSAVIGLLFNAINYM-LLAGSLFVIAAGLTEEWEHEASRIADP 171
G HSSHG V V +A+I ++ + + + +L +L + G T +ADP
Sbjct: 239 GGHSSHGHAHDGKNVNVRAALIHVIGDLVQSIGVLIAALIIRFTGWT---------LADP 289
Query: 172 ALSACAAIVLVVFNYPFMRSAGLVLLQTVPEGLGACDLRTAALRVPGVFAIHELHVWQLH 231
+ +I+++ MR VL++ P D++ A + GV +H+LH+W +
Sbjct: 290 ICTFLFSIIVLFTTVTVMRDIFFVLMEATPSHYDLSDVKKALSALEGVKGVHDLHLWSIG 349
Query: 232 RDKVVATAHVIYGTHEDYLKNSALVCDVFKRH-GIGLVTLQPE 273
DK + H+ + ++N A + +R G+ + T+Q E
Sbjct: 350 MDKTAFSVHLALESPNRAMENVAEARSLIRRRFGVAVATVQVE 392
Score = 36.7 bits (81), Expect = 0.022
Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 9/112 (8%)
Query: 35 FTNSPTLLVDTCHSLCRLVGLITTLISFKYERADEGTGREGRLRNTFGWARIEVVGRLSV 94
+ S ++ D H L L+ I ++ + + R R +FG+ R EV+G L+
Sbjct: 125 WAQSLAIMTDAGHMLSDLLSFIISIFAIRCARLPASK------RLSFGYERAEVLGALTS 178
Query: 95 HVLFASFALALVVNALQLGVHSSHGPPPRYPRVIVGSAVIGLLFNAINYMLL 146
++ LVV A+Q V++ H V++ +A +G+LFN + ++L
Sbjct: 179 VIILWVLTTVLVVVAIQRIVNNEHEVD---ADVMLITAGVGVLFNIVMGLVL 227
>AL021480-2|CAA16327.1| 391|Caenorhabditis elegans Hypothetical
protein Y39E4A.2a protein.
Length = 391
Score = 58.8 bits (136), Expect = 5e-09
Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 11/163 (6%)
Query: 113 GVHSSHGPPPRYPRVIVGSAVIGLLFNAINYM-LLAGSLFVIAAGLTEEWEHEASRIADP 171
G HSSHG V V +A+I ++ + + + +L +L + G T +ADP
Sbjct: 220 GGHSSHGHAHDGKNVNVRAALIHVIGDLVQSIGVLIAALIIRFTGWT---------LADP 270
Query: 172 ALSACAAIVLVVFNYPFMRSAGLVLLQTVPEGLGACDLRTAALRVPGVFAIHELHVWQLH 231
+ +I+++ MR VL++ P D++ A + GV +H+LH+W +
Sbjct: 271 ICTFLFSIIVLFTTVTVMRDIFFVLMEATPSHYDLSDVKKALSALEGVKGVHDLHLWSIG 330
Query: 232 RDKVVATAHVIYGTHEDYLKNSALVCDVFKRH-GIGLVTLQPE 273
DK + H+ + ++N A + +R G+ + T+Q E
Sbjct: 331 MDKTAFSVHLALESPNRAMENVAEARSLIRRRFGVAVATVQVE 373
Score = 36.7 bits (81), Expect = 0.022
Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 9/112 (8%)
Query: 35 FTNSPTLLVDTCHSLCRLVGLITTLISFKYERADEGTGREGRLRNTFGWARIEVVGRLSV 94
+ S ++ D H L L+ I ++ + + R R +FG+ R EV+G L+
Sbjct: 106 WAQSLAIMTDAGHMLSDLLSFIISIFAIRCARLPASK------RLSFGYERAEVLGALTS 159
Query: 95 HVLFASFALALVVNALQLGVHSSHGPPPRYPRVIVGSAVIGLLFNAINYMLL 146
++ LVV A+Q V++ H V++ +A +G+LFN + ++L
Sbjct: 160 VIILWVLTTVLVVVAIQRIVNNEHEVD---ADVMLITAGVGVLFNIVMGLVL 208
>U23529-12|AAL13323.1| 561|Caenorhabditis elegans Cation diffusion
facilitator familyprotein 1, isoform b protein.
Length = 561
Score = 45.6 bits (103), Expect = 5e-05
Identities = 33/137 (24%), Positives = 63/137 (45%), Gaps = 7/137 (5%)
Query: 138 FNAINYMLLAGSLFVIAAGLTEEWEHEASRIADPALSACAAIVLVVFNYPFMRSAGLVLL 197
F ++ M+ AG ++ + W+ A DP LS A ++ ++++G LL
Sbjct: 397 FGSVIVMISAGFVYFLPT-----WKIAA--YLDPILSISLASIMGFTAVVLVKTSGEKLL 449
Query: 198 QTVPEGLGACDLRTAALRVPGVFAIHELHVWQLHRDKVVATAHVIYGTHEDYLKNSALVC 257
+ PEGL ++ + GV + +L VW L +++A AHV + + + +
Sbjct: 450 KQTPEGLDLEKVKKDLCSIVGVSKVEKLSVWTLCGQRIIAAAHVNICHPAVFPEAAYKIK 509
Query: 258 DVFKRHGIGLVTLQPEF 274
+ F G+ T++P F
Sbjct: 510 NYFHDLGVHSTTIEPTF 526
>U23529-11|AAK39165.1| 519|Caenorhabditis elegans Cation diffusion
facilitator familyprotein 1, isoform a protein.
Length = 519
Score = 45.6 bits (103), Expect = 5e-05
Identities = 33/137 (24%), Positives = 63/137 (45%), Gaps = 7/137 (5%)
Query: 138 FNAINYMLLAGSLFVIAAGLTEEWEHEASRIADPALSACAAIVLVVFNYPFMRSAGLVLL 197
F ++ M+ AG ++ + W+ A DP LS A ++ ++++G LL
Sbjct: 355 FGSVIVMISAGFVYFLPT-----WKIAA--YLDPILSISLASIMGFTAVVLVKTSGEKLL 407
Query: 198 QTVPEGLGACDLRTAALRVPGVFAIHELHVWQLHRDKVVATAHVIYGTHEDYLKNSALVC 257
+ PEGL ++ + GV + +L VW L +++A AHV + + + +
Sbjct: 408 KQTPEGLDLEKVKKDLCSIVGVSKVEKLSVWTLCGQRIIAAAHVNICHPAVFPEAAYKIK 467
Query: 258 DVFKRHGIGLVTLQPEF 274
+ F G+ T++P F
Sbjct: 468 NYFHDLGVHSTTIEPTF 484
>Z68119-3|CAA92193.1| 382|Caenorhabditis elegans Hypothetical
protein T18D3.3 protein.
Length = 382
Score = 41.9 bits (94), Expect = 6e-04
Identities = 18/74 (24%), Positives = 38/74 (51%)
Query: 168 IADPALSACAAIVLVVFNYPFMRSAGLVLLQTVPEGLGACDLRTAALRVPGVFAIHELHV 227
I DP + +++++ +R A +VLL+ P + + ++ + GV +H+L +
Sbjct: 259 IIDPICTLVFSVIVLCTTIYILRDAMIVLLEGRPSNIDFAKVFSSLEDIEGVKKVHDLRI 318
Query: 228 WQLHRDKVVATAHV 241
W L DK+ + H+
Sbjct: 319 WSLTMDKIALSVHL 332
>U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform a
protein.
Length = 428
Score = 39.9 bits (89), Expect = 0.002
Identities = 46/181 (25%), Positives = 69/181 (38%), Gaps = 8/181 (4%)
Query: 68 DEGTGREGRLRNTFGWARIEVVGRLSVHVLFASFALAL--VVNALQLGVHSS---HGPPP 122
D E + GW SV +L +++AL + LQ SS H
Sbjct: 120 DASAAHEHEVEEIGGWPYFVGSAASSVALLLSAYALKNQPFQHVLQSATASSLQEHAADL 179
Query: 123 RYPRVIVGSAVIGLLFNAINYMLLAGSLFVIAAGLTEEWEHEASRIADPALSACAAIVLV 182
+ V + LL IN M+L L E ++H+ + ADP ++ +
Sbjct: 180 SHAVCWVIPGLSRLLLPRINSMVLLALTTTGLNLLCEHFKHDFAW-ADPVCCLLLSVAVF 238
Query: 183 VFNYPFMRSAGLVLLQTVPEGL-GACD-LRTAALRVPGVFAIHELHVWQLHRDKVVATAH 240
YP G++LLQT P L D + A + GV + WQL + +V T
Sbjct: 239 STMYPLSTYTGMILLQTTPPHLINQIDRCISEASHIDGVLELKSGRFWQLDFNSLVGTVD 298
Query: 241 V 241
V
Sbjct: 299 V 299
>U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform b
protein.
Length = 446
Score = 39.9 bits (89), Expect = 0.002
Identities = 46/181 (25%), Positives = 69/181 (38%), Gaps = 8/181 (4%)
Query: 68 DEGTGREGRLRNTFGWARIEVVGRLSVHVLFASFALAL--VVNALQLGVHSS---HGPPP 122
D E + GW SV +L +++AL + LQ SS H
Sbjct: 138 DASAAHEHEVEEIGGWPYFVGSAASSVALLLSAYALKNQPFQHVLQSATASSLQEHAADL 197
Query: 123 RYPRVIVGSAVIGLLFNAINYMLLAGSLFVIAAGLTEEWEHEASRIADPALSACAAIVLV 182
+ V + LL IN M+L L E ++H+ + ADP ++ +
Sbjct: 198 SHAVCWVIPGLSRLLLPRINSMVLLALTTTGLNLLCEHFKHDFAW-ADPVCCLLLSVAVF 256
Query: 183 VFNYPFMRSAGLVLLQTVPEGL-GACD-LRTAALRVPGVFAIHELHVWQLHRDKVVATAH 240
YP G++LLQT P L D + A + GV + WQL + +V T
Sbjct: 257 STMYPLSTYTGMILLQTTPPHLINQIDRCISEASHIDGVLELKSGRFWQLDFNSLVGTVD 316
Query: 241 V 241
V
Sbjct: 317 V 317
>AL132876-3|CAD21657.2| 746|Caenorhabditis elegans Hypothetical
protein Y105E8A.3 protein.
Length = 746
Score = 38.7 bits (86), Expect = 0.005
Identities = 35/126 (27%), Positives = 53/126 (42%), Gaps = 2/126 (1%)
Query: 148 GSLFVIAAGLTEEWEHEASRIADPALSACAAIVLVVFNYPFMRSAGLVLLQTVPEGLGAC 207
GS+FVI + L +W DP S +++++ YP + S+ LLQ VPE
Sbjct: 573 GSVFVIISTLLIQWFGWVW--VDPLCSLILSLLIIGSVYPLLVSSISTLLQDVPEEEEFE 630
Query: 208 DLRTAALRVPGVFAIHELHVWQLHRDKVVATAHVIYGTHEDYLKNSALVCDVFKRHGIGL 267
L + V + H+WQ D VA+ HV + V ++ K G
Sbjct: 631 YHINEILEIEHVESYSNAHMWQHKSDINVASVHVQVKEEANAQMIRHRVSNILKSTGATH 690
Query: 268 VTLQPE 273
T+Q E
Sbjct: 691 STVQVE 696
>AF000196-4|AAC24254.2| 429|Caenorhabditis elegans Hypothetical
protein B0041.5 protein.
Length = 429
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/74 (25%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 87 EVVGRLSVHVLFASFA-LALVVNALQLGVHSSHGPPPRYPRVIVGSAVIGLLFNAINYML 145
E G+L ++++F + +ALV+ L + G P +P + + +LF+A+ +
Sbjct: 274 EKYGKLDINLMFGAIGVIALVLGTPTLNLLDRFGVEPLHP-LPNATQFSSILFSALIGTI 332
Query: 146 LAGSLFVIAAGLTE 159
+A L+++AAG+ +
Sbjct: 333 VADYLWLLAAGMCD 346
>AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (grd
related) protein19 protein.
Length = 157
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/26 (46%), Positives = 13/26 (50%)
Query: 294 NLGCSCPCVKECTGPRCCEPPNIPPI 319
N GC C C G CC PP PP+
Sbjct: 26 NDGCGCGCGGGGGGGGCCAPPPPPPV 51
>L12018-1|AAA65458.1| 518|Caenorhabditis elegans Polk (dna
polymerase kappa) homologprotein 1 protein.
Length = 518
Score = 28.7 bits (61), Expect = 5.9
Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 5/108 (4%)
Query: 197 LQTVPEGLGACDLRTAALRVPGVFAIHELHVWQLHRDKVVATAHVIYGTHEDYLKNSALV 256
L+TVP +G+ + + + + F + + +K+ + ++ G + Y K S
Sbjct: 105 LRTVPMAVGSSAMLSTSNYLARRFGVRA-GMPGFISNKLCPSLTIVPGNYPKYTKVSRQF 163
Query: 257 CDVFKRHG--IGLVTLQPEFM-LTSSRGTEEEKKELIAYGNLGCSCPC 301
+F + +G+++L F+ LT + EKK + G CPC
Sbjct: 164 SQIFMEYDSDVGMMSLDEAFIDLTDYVASNTEKKTFKRH-RFGGDCPC 210
>AF067943-4|AAC17661.1| 359|Caenorhabditis elegans Hypothetical
protein F59B1.6 protein.
Length = 359
Score = 28.7 bits (61), Expect = 5.9
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 12/109 (11%)
Query: 211 TAALRVPGVFAIHELHVWQLHRDKVVATAHVIYGTHEDYLK----NSALVCDVFK---RH 263
T L +PG+F + W+ HR VVA ++ G +LK +AL + R+
Sbjct: 185 TKVLDIPGIFVYTDS--WKFHRILVVAMVLLVSGGVVSFLKLSSQQAALHLSMSNHNLRN 242
Query: 264 GIGLVTLQPEFMLTSSRGTEEEKKELIAYGNLGCSCPCV--KEC-TGPR 309
+ TL+ E S + E + ++ CS P +C GPR
Sbjct: 243 PAAMQTLERENSKISQKSAERYDYSELTVWHVSCSNPTFSNSQCIQGPR 291
>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical
protein ZK783.1 protein.
Length = 2585
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Query: 264 GIGLVTLQPEFMLTSSRGTEEEKKELIAYGNLGCS--CPCVKECTGPRC 310
G G + +T +RG + EL G L C+ CP EC G C
Sbjct: 483 GSGSIQTSSGGSITVTRGLIPKDVELTTSGRLACTSYCPPNSECVGGYC 531
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.325 0.139 0.441
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,546,969
Number of Sequences: 27539
Number of extensions: 284370
Number of successful extensions: 830
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 819
Number of HSP's gapped (non-prelim): 17
length of query: 322
length of database: 12,573,161
effective HSP length: 81
effective length of query: 241
effective length of database: 10,342,502
effective search space: 2492542982
effective search space used: 2492542982
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 60 (28.3 bits)
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