GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000895-TA|BGIBMGA000895-PA|IPR009053|Prefoldin
         (706 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    26   0.77 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    26   0.77 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    26   0.77 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    26   0.77 
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    26   0.77 
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    25   2.3  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 26.2 bits (55), Expect = 0.77
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 32   HKITKLKTV-WQEKMVTFEKSKKELEDRQNQVME 64
            + I  L  V W  + V  +K+KKELE+ + Q  E
Sbjct: 1049 YSIINLNVVSWGTREVAVKKTKKELEEEKKQAEE 1082


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 26.2 bits (55), Expect = 0.77
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 32   HKITKLKTV-WQEKMVTFEKSKKELEDRQNQVME 64
            + I  L  V W  + V  +K+KKELE+ + Q  E
Sbjct: 1049 YSIINLNVVSWGTREVAVKKTKKELEEEKKQAEE 1082


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 26.2 bits (55), Expect = 0.77
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 32   HKITKLKTV-WQEKMVTFEKSKKELEDRQNQVME 64
            + I  L  V W  + V  +K+KKELE+ + Q  E
Sbjct: 1049 YSIINLNVVSWGTREVAVKKTKKELEEEKKQAEE 1082


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 26.2 bits (55), Expect = 0.77
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 32   HKITKLKTV-WQEKMVTFEKSKKELEDRQNQVME 64
            + I  L  V W  + V  +K+KKELE+ + Q  E
Sbjct: 1049 YSIINLNVVSWGTREVAVKKTKKELEEEKKQAEE 1082


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 26.2 bits (55), Expect = 0.77
 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 9/57 (15%)

Query: 569 KRQEEYDEKLQTKENEIKRLVESMTEQEHVLNKKEKEIKMLNEKEEEHMNIINLLHN 625
           KR+ E  E L   E +IK   +         N++ KE K   ++ EE   I NL HN
Sbjct: 185 KRKSELAENLGLSERQIKIWFQ---------NRRAKERKQNKKRIEEKSQIDNLFHN 232


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 2/43 (4%)

Query: 655 MSISNRVLK--CSLLGVVTQSRTLRKNMSGLFPAGTTIIYSIF 695
           +SI ++ +K   +LL   + SRT + + +G FP   T++  IF
Sbjct: 330 VSIKDQTIKEELALLAQQSTSRTSKFSAAGFFPVDFTLLGFIF 372


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.311    0.128    0.335 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,861
Number of Sequences: 317
Number of extensions: 4670
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 6
length of query: 706
length of database: 114,650
effective HSP length: 62
effective length of query: 644
effective length of database: 94,996
effective search space: 61177424
effective search space used: 61177424
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 46 (22.6 bits)