Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000893-TA|BGIBMGA000893-PA|IPR008734|Phosphorylase
kinase alphabeta
         (631 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       26   0.68 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    25   1.2  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 26.2 bits (55), Expect = 0.68
 Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 3/62 (4%)

Query: 80  RRMSVRGAIKKTRSINVDSDTLGMEGEYVGPLLERKPSLLEVDPTHAGRSPSPEEAKKKV 139
           R+++V G+ +++R +++        GE       RK    +VDPT        EE    V
Sbjct: 387 RQLAVGGSQEESRVLDLSKPGCSYTGEQKS---RRKGPAFKVDPTQVESEEEDEETSTTV 443

Query: 140 FT 141
           F+
Sbjct: 444 FS 445


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 16/62 (25%), Positives = 27/62 (43%)

Query: 132  PEEAKKKVFTKGTSTTNLGVAPPTIEITKDQTTSPPKEVVNKSPPVLRNRTVSESQSVVY 191
            P+    K   +G+S+++ GV      +     +S P    +KSPPV        S+ + Y
Sbjct: 1085 PDPVALKSAQQGSSSSSEGVPLKGTAVPPPSGSSGPGSTGSKSPPVAGFEESPHSKFLKY 1144

Query: 192  AE 193
             E
Sbjct: 1145 TE 1146


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.317    0.133    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,217
Number of Sequences: 317
Number of extensions: 5421
Number of successful extensions: 17
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 16
Number of HSP's gapped (non-prelim): 2
length of query: 631
length of database: 114,650
effective HSP length: 61
effective length of query: 570
effective length of database: 95,313
effective search space: 54328410
effective search space used: 54328410
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 46 (22.6 bits)