Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000893-TA|BGIBMGA000893-PA|IPR008734|Phosphorylase
kinase alphabeta
(631 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12218| Best HMM Match : PHK_AB (HMM E-Value=2.2e-07) 149 9e-36
SB_25670| Best HMM Match : Sarcoglycan_1 (HMM E-Value=6.2e-06) 148 2e-35
SB_12954| Best HMM Match : MNHE (HMM E-Value=5.8) 35 0.17
SB_3044| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.17
SB_46937| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.23
SB_1817| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.40
SB_19609| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.2
SB_41384| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.1
SB_26441| Best HMM Match : TNFR_c6 (HMM E-Value=3.8) 31 2.8
SB_56315| Best HMM Match : Collagen (HMM E-Value=0.00013) 31 3.7
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.7
SB_17940| Best HMM Match : Laminin_EGF (HMM E-Value=0.077) 31 3.7
SB_31131| Best HMM Match : Drf_FH1 (HMM E-Value=2.4) 31 3.7
SB_9586| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.9
SB_7332| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.9
SB_21157| Best HMM Match : Laminin_EGF (HMM E-Value=0.036) 30 6.4
SB_37674| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.5
>SB_12218| Best HMM Match : PHK_AB (HMM E-Value=2.2e-07)
Length = 732
Score = 149 bits (360), Expect = 9e-36
Identities = 101/222 (45%), Positives = 129/222 (58%), Gaps = 38/222 (17%)
Query: 363 ELSRTLSCDGEEASEHLLNLSPFEMKNLLYHILSGKEFAIN-----SVGRGNFSIVS-NK 416
E + ++ E+A+E+ +NLSPFEMK LLYHILSGKEF I ++ SI++ +
Sbjct: 522 ETKKYMNRSREDAAEYFMNLSPFEMKTLLYHILSGKEFGITDGSVRTLSEKQLSIINIDL 581
Query: 417 SNRYG--KKSQIV--LEGQSLQ---GSIDE---TPMVEP-----------DRQGQWLRRR 455
R G K S + L G+S+ G D T EP +R G W+RRR
Sbjct: 582 PKRVGIKKLSNAIKNLSGRSMHRQHGQPDLLHLTQTAEPQHEEEVSPTRDERIGTWIRRR 641
Query: 456 RLDGALNRVPRDFYPRVWGVLEKGKILQPHLTQEMTPGELKFALAVETVLNSIPQPEYRQ 515
LDGALNRVP DFY RVW +LEK MTPGELKFAL VE+ LN IP+PEYRQ
Sbjct: 642 CLDGALNRVPEDFYARVWKILEK-----------MTPGELKFALCVESALNRIPEPEYRQ 690
Query: 516 LVVEALMVLTLVVEYKAVAHLGEAIEVELLVHKANQIFLEDQ 557
LVVE LMVL LVV L + ++V+ LV + +Q +L +Q
Sbjct: 691 LVVEVLMVLALVVISYPQQSLWDTVDVDELVLEGHQAYLTEQ 732
Score = 34.3 bits (75), Expect = 0.30
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 195 ETDELLAMLRETESLDEQGDILQYLVDTHGLDFNTDMLE 233
ET E + L + ++EQ DIL +L T G F+T++ +
Sbjct: 353 ETKEYVKQLEDATDINEQADILHFLYSTKGAKFDTNLYD 391
>SB_25670| Best HMM Match : Sarcoglycan_1 (HMM E-Value=6.2e-06)
Length = 436
Score = 148 bits (358), Expect = 2e-35
Identities = 81/167 (48%), Positives = 100/167 (59%), Gaps = 13/167 (7%)
Query: 438 DETPMVEPDRQGQWLRRRRLDGALNRVPRDFYPRVWGVLEKGKILQPHLTQEMTPGELKF 497
+E +R G W+RRR LDGALNRVP DFY RVW +LEK MTPGELKF
Sbjct: 66 EEVSPTRDERIGTWIRRRCLDGALNRVPEDFYARVWKILEK-----------MTPGELKF 114
Query: 498 ALAVETVLNSIPQPEYRQLVVEALMVLTLVVEYKAVAHLGEAIEVELLVHKANQIFLEDQ 557
AL VE+ LN IP+PEYRQLVVE LMVL LVV L + ++V+ LV + +Q +L +Q
Sbjct: 115 ALCVESALNRIPEPEYRQLVVEVLMVLALVVISYPQQSLWDTVDVDELVLEGHQAYLTEQ 174
Query: 558 GLCNGDATLCCAKGAERXXXXXXXXXXXXXQHLYDSAPSGSYGTMTY 604
G++ LCCA+ + YD+APSG YGTMTY
Sbjct: 175 MAIGGNSVLCCARPIN--DRVGCGGANGICRFFYDTAPSGRYGTMTY 219
>SB_12954| Best HMM Match : MNHE (HMM E-Value=5.8)
Length = 463
Score = 35.1 bits (77), Expect = 0.17
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Query: 119 LEVDPTHAGRSPSPEEAKKKVFTKGTSTTNLGVAPPTIEITKD--QTTSPPKEVVNKSPP 176
L+V P GR P PE K K + K + P E ++D + P+++V K PP
Sbjct: 374 LDVMPLAGGRLPLPE-VKLKCYDKTEGIKAGDLEHPGSEKSEDKIEQRKKPEKIVPKEPP 432
Query: 177 VLRNRTVSESQSVVYAEQETDELLAMLRETESL 209
V+R + VY + ++L + TES+
Sbjct: 433 VVRPLACGQ----VYNHSQATQVLVLPGNTESV 461
>SB_3044| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 35.1 bits (77), Expect = 0.17
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 129 SPSPEEAKKKVFTKGTSTTNLGVAPPTIEITKDQTTSPPKEVVNKSPPVLRNRTVSESQS 188
+P E+AKK VF KGT T EI KD+ E + K L+N ++ S++
Sbjct: 435 TPKAEKAKKSVFGKGT-LTKKSKKKAVKEIEKDEELK-DVESLKKDREDLKNECLALSET 492
Query: 189 VVYAEQETDELLAMLRETESLDEQ 212
V E E M +E E L+E+
Sbjct: 493 VTKIANEKRE---MEKEIEKLEEE 513
>SB_46937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 34.7 bits (76), Expect = 0.23
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 169 EVVNKSPPVLRNRTVSESQSVVYAEQETDELLAMLRETESLDEQGDILQYLVDTHGLDFN 228
E NK+ + T + + Q+ D LL L E E+ +E ++ + GLDF+
Sbjct: 161 ERTNKALRRMLRETQQSEEEHQHLRQQQDVLLRKLTEAETSNESNNMSSSTFECEGLDFD 220
Query: 229 TDMLE 233
+D+L+
Sbjct: 221 SDLLQ 225
>SB_1817| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1300
Score = 33.9 bits (74), Expect = 0.40
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 132 PEEAKKKVFTKGT-STTNLGVAPPTIEITKDQTTSPPKEVVNKSPPV-LRNRTV 183
PEE +++ G STT+ VAPP T+ +T P PPV LRN++V
Sbjct: 403 PEEKEEECSIYGNISTTSTPVAPPPTPPTRGGSTKRPLPTPRPKPPVTLRNKSV 456
>SB_19609| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 32.3 bits (70), Expect = 1.2
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 141 TKGTSTTNLGV-APPTIEITKDQTTSPPKEVVNKSPPVLRNRTVSESQSVVYAEQETDEL 199
TKG S+T+ PP DQ S + + +P + V E ++ V E+E +
Sbjct: 45 TKGESSTSAAANEPPIKRQALDQAPSGLPGMPSAAP-----KKVDEEETYVPVEEEYKDS 99
Query: 200 LAMLRETESLDEQGDILQYLVDT 222
L+ T+S + D Q+ VDT
Sbjct: 100 SHFLKGTQSANPHNDYCQHFVDT 122
>SB_41384| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 31.5 bits (68), Expect = 2.1
Identities = 25/114 (21%), Positives = 54/114 (47%), Gaps = 4/114 (3%)
Query: 108 VGPLLERK--PSLLEVDPTHAGRSPSPEEAKKKVFTKGTSTTNLGVAPPTIEITKDQTTS 165
V P+ ER P + V P+ G PS + F + + + + PP + + S
Sbjct: 86 VRPMEERDWGPPRMRVRPSFRGHGPSGNRSAPGHFDRPNNGSWIQRGPPKCILHVLFSLS 145
Query: 166 PPKEVVN-KSPPVLRNRTVS-ESQSVVYAEQETDELLAMLRETESLDEQGDILQ 217
PP+ + +PP++R+R ++ + ++ +TD+ +L + + +Q + L+
Sbjct: 146 PPQLPLRPPAPPLMRSRQITPPEEKESPSKGDTDDFDLLLERHKLIQQQLEALE 199
>SB_26441| Best HMM Match : TNFR_c6 (HMM E-Value=3.8)
Length = 281
Score = 31.1 bits (67), Expect = 2.8
Identities = 29/109 (26%), Positives = 45/109 (41%), Gaps = 3/109 (2%)
Query: 111 LLERKPSLLEVDPTHAGRSPSPEEAKKKVFTKG-TSTTN-LGVAPPTIEITKDQTTSPPK 168
L + +PS ++ G S + ++++ KG T N + V P K + TSP K
Sbjct: 90 LFKGEPSTPKMRSIKEGESEIKQRKEEEMKLKGETKKVNEMFVFPGETTPVKGKKTSPRK 149
Query: 169 EVVNKSPPVLRNRTVSESQSVVYAEQETDELLAMLRETESLDEQGDILQ 217
E V K P L R ++ Q VV +E + + Q LQ
Sbjct: 150 EPVFKKPVALSARNIAR-QCVVQESGSVEEEYIGYKHDHLQENQNSCLQ 197
>SB_56315| Best HMM Match : Collagen (HMM E-Value=0.00013)
Length = 898
Score = 30.7 bits (66), Expect = 3.7
Identities = 23/97 (23%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 353 VGLIIQVMATELSRTLSCDGEEASEHLLNLSPFEMKNLLYHILSGKEFAINSVGRGNFSI 412
V II + +S+ LS ++ S+ ++ LS ++ N + ++S K N++ FS+
Sbjct: 682 VSAIISTICASVSKRLSRSVQKHSD-IVMLSRTKL-NTINDLIS-KSLMDNAISDQEFSL 738
Query: 413 VSNKSNRYGKKSQIVLEGQSLQGS-IDETPMVEPDRQ 448
+ ++ ++Y K Q + + +G + E P+ E +Q
Sbjct: 739 IVDEMDKYNKMRQSIQVNATRKGDPVTEDPIQEKKKQ 775
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 30.7 bits (66), Expect = 3.7
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 11/132 (8%)
Query: 82 MSVRGAIKKTRSINVDSDTLGMEGEYVGPLLERKPSLLEVDPTHAG-RSPSPEEAKKKVF 140
M+ R + K+ S+ +D+ E + K ++++ PT + P P E
Sbjct: 249 MTTRPSSLKSGSLTSSNDSKIHPSEN-DVITSNKRTVIKPTPTESVVTKPIPAEG---AV 304
Query: 141 TKGTSTTNLGVAPPTIE--ITKDQTTSPPKEVVNKSPPVLRNRTV-SESQSVVYAEQETD 197
TK TST + P E +TK TT + VV K P+ T+ + ++SVV T+
Sbjct: 305 TKQTSTESAVTQPEPTESTVTKQITT---ESVVTKQTPIESAVTMPAPTESVVTMPAPTE 361
Query: 198 ELLAMLRETESL 209
++ M TES+
Sbjct: 362 SVVTMPAPTESV 373
>SB_17940| Best HMM Match : Laminin_EGF (HMM E-Value=0.077)
Length = 816
Score = 30.7 bits (66), Expect = 3.7
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 317 YGDDESTAMLTQELL--VYLAMFIRTEPQLFLEMLRLRVGLIIQVMATEL-SRTLSCDGE 373
YG D + T +L +Y F +P +L L +G ++ VMAT+L L GE
Sbjct: 721 YGQDNPFFLGTSAVLSGLYAVFFANQKPIRYLFEYWLHLGSLLAVMATQLMGMVLRIPGE 780
Query: 374 EAS 376
+AS
Sbjct: 781 DAS 783
>SB_31131| Best HMM Match : Drf_FH1 (HMM E-Value=2.4)
Length = 407
Score = 30.7 bits (66), Expect = 3.7
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 11/132 (8%)
Query: 82 MSVRGAIKKTRSINVDSDTLGMEGEYVGPLLERKPSLLEVDPTHAG-RSPSPEEAKKKVF 140
M+ R + K+ S+ +D+ E + K ++++ PT + P P E
Sbjct: 1 MTTRPSSLKSGSLTSSNDSKIHPSEN-DVITSNKRTVIKPTPTESVVTKPIPAEG---AV 56
Query: 141 TKGTSTTNLGVAPPTIE--ITKDQTTSPPKEVVNKSPPVLRNRTV-SESQSVVYAEQETD 197
TK TST + P E +TK TT + VV K P+ T+ + ++SVV T+
Sbjct: 57 TKQTSTESAVTQPEPTESTVTKQITT---ESVVTKQTPIESAVTMPAPTESVVTMPAPTE 113
Query: 198 ELLAMLRETESL 209
++ M TES+
Sbjct: 114 SVVTMPAPTESV 125
>SB_9586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1200
Score = 30.3 bits (65), Expect = 4.9
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 317 YGDDESTAMLTQELL--VYLAMFIRTEPQLFLEMLRLRVGLIIQVMATEL-SRTLSCDGE 373
YG D + T +L +Y F +P ++ L +G ++ VMAT+L L GE
Sbjct: 782 YGQDNPFYLGTSAVLSGLYAVFFANQKPIRYVYEYWLHLGSLVAVMATQLMGMVLRIPGE 841
Query: 374 EAS 376
+AS
Sbjct: 842 DAS 844
>SB_7332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1894
Score = 30.3 bits (65), Expect = 4.9
Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 6/117 (5%)
Query: 102 GMEGEYVGPL-LERKPSLLEVDPTHAGRSPSPEEAKKKVFTKGTSTTNLGVAPPTIEITK 160
G + G L +E+K SL + SPS +E + ++ T T++ VA +
Sbjct: 1551 GAASQVAGALQVEKKTSLYTTENQKEIESPSCDEISSEAISQLTRTSHQAVATQAEPSSA 1610
Query: 161 DQTTSPPKEVVNKSPPVLRNR-TVSESQSVVYAEQETDELLAMLRETESLDEQGDIL 216
D TSP + + + P +R T+ E+ S + + + E L + D IL
Sbjct: 1611 DSITSP--DCLQQEQPSTSDRSTLPETLSXI--KNTSPESLPAAEPLSTSDRSSSIL 1663
>SB_21157| Best HMM Match : Laminin_EGF (HMM E-Value=0.036)
Length = 897
Score = 29.9 bits (64), Expect = 6.4
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 317 YGDDESTAMLTQELL--VYLAMFIRTEPQLFLEMLRLRVGLIIQVMATEL-SRTLSCDGE 373
YG D + T +L +Y F +P ++ L +G ++ VMAT+L L GE
Sbjct: 709 YGQDNPFFLGTSAILSGLYAVFFANQKPIRYVFEYWLHLGSLLAVMATQLMGMVLRIPGE 768
Query: 374 EAS 376
+AS
Sbjct: 769 DAS 771
>SB_37674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 575
Score = 29.5 bits (63), Expect = 8.5
Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Query: 130 PSPEEAKKKVFTKGTSTTNLGVAPPTI-EITKDQTT--SPPKEVVNKSPPVLRNRTVSES 186
P+P+ K + GTST GV P TI T TT + P + VN+ PV S
Sbjct: 447 PAPDAEDKPKSSSGTSTPKEGV-PKTIGSTTAADTTAQASPAQDVNRKSPVSEAEAPKPS 505
Query: 187 QSVVYAEQE 195
+ AE E
Sbjct: 506 AAKEEAEPE 514
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.133 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,745,019
Number of Sequences: 59808
Number of extensions: 734827
Number of successful extensions: 1997
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1984
Number of HSP's gapped (non-prelim): 25
length of query: 631
length of database: 16,821,457
effective HSP length: 87
effective length of query: 544
effective length of database: 11,618,161
effective search space: 6320279584
effective search space used: 6320279584
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 63 (29.5 bits)
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