Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000892-TA|BGIBMGA000892-PA|IPR008734|Phosphorylase
kinase alphabeta, IPR008928|Six-hairpin glycosidase
         (509 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    26   0.71 
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   6.6  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   8.8  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   8.8  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   8.8  

>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 25.8 bits (54), Expect = 0.71
 Identities = 11/31 (35%), Positives = 19/31 (61%)

Query: 453 DKLLEYDLHVQTISEVAPIEVQPARVLSHLY 483
           +KL+E+D+ +Q +S +   E Q  R   HL+
Sbjct: 107 NKLIEFDVKLQNVSLIINYENQRTRSRIHLF 137


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 6.6
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 36  SPQNDHAWIRDNLYCILAVWGLSM 59
           S +N   WI+DN +    VW + M
Sbjct: 408 SIRNKMKWIKDNGFAGAMVWTIDM 431


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 8.8
 Identities = 6/15 (40%), Positives = 11/15 (73%)

Query: 181 YGIWERGDKTNHGLP 195
           +G+W+RG +   G+P
Sbjct: 202 HGVWQRGSQYYDGVP 216


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.2 bits (45), Expect = 8.8
 Identities = 6/15 (40%), Positives = 11/15 (73%)

Query: 181 YGIWERGDKTNHGLP 195
           +G+W+RG +   G+P
Sbjct: 202 HGVWQRGSQYYDGVP 216


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 8.8
 Identities = 11/30 (36%), Positives = 19/30 (63%)

Query: 259 LLSIISYPAFAVDDPQLIAKTRDAIITKLQ 288
           LLS+I      ++  +++ K+ DAI +KLQ
Sbjct: 487 LLSVIKSSFLDINTWKMLVKSFDAIDSKLQ 516


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.321    0.138    0.411 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,311
Number of Sequences: 317
Number of extensions: 5142
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 5
length of query: 509
length of database: 114,650
effective HSP length: 60
effective length of query: 449
effective length of database: 95,630
effective search space: 42937870
effective search space used: 42937870
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)