Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000890-TA|BGIBMGA000890-PA|IPR000342|Regulator of G
protein signalling, IPR001683|Phox-like, IPR003114|PX-associated,
IPR013937|Sorting nexin, C-terminal
(844 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43841| Best HMM Match : PXA (HMM E-Value=1e-16) 245 1e-64
SB_38344| Best HMM Match : PX (HMM E-Value=8.1e-21) 94 5e-19
SB_36894| Best HMM Match : PXA (HMM E-Value=2.5e-13) 46 2e-04
SB_39904| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.005
SB_5676| Best HMM Match : RGS (HMM E-Value=1.5e-38) 41 0.005
SB_8804| Best HMM Match : RGS (HMM E-Value=1.5e-37) 38 0.034
SB_46677| Best HMM Match : RGS (HMM E-Value=7.5e-31) 37 0.059
SB_17934| Best HMM Match : PX (HMM E-Value=2e-19) 35 0.31
SB_49662| Best HMM Match : Bromodomain (HMM E-Value=9.8e-38) 34 0.41
SB_36254| Best HMM Match : Filament (HMM E-Value=0.21) 34 0.55
SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10) 34 0.55
SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19) 34 0.55
SB_7846| Best HMM Match : CoCoA (HMM E-Value=0.00016) 33 0.72
SB_27687| Best HMM Match : zf-B_box (HMM E-Value=6.7e-10) 33 1.3
SB_10355| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0037) 32 1.7
SB_56568| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.7
SB_49264| Best HMM Match : Ank (HMM E-Value=3.7e-22) 31 2.9
SB_3141| Best HMM Match : Vicilin_N (HMM E-Value=4.1) 31 2.9
SB_1933| Best HMM Match : PI3_PI4_kinase (HMM E-Value=4.06377e-44) 31 2.9
SB_21029| Best HMM Match : PX (HMM E-Value=9.1e-15) 31 5.1
SB_1298| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 5.1
SB_41748| Best HMM Match : Transposase_14 (HMM E-Value=0.79) 31 5.1
SB_54597| Best HMM Match : zf-B_box (HMM E-Value=4e-17) 30 6.7
SB_28019| Best HMM Match : KNOX2 (HMM E-Value=0.24) 30 6.7
SB_18515| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.7
SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.7
SB_1571| Best HMM Match : zf-C2H2 (HMM E-Value=1.2e-16) 30 6.7
SB_884| Best HMM Match : KNOX2 (HMM E-Value=0.24) 30 6.7
SB_2192| Best HMM Match : rve (HMM E-Value=4e-23) 30 6.7
SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10) 30 8.9
>SB_43841| Best HMM Match : PXA (HMM E-Value=1e-16)
Length = 848
Score = 245 bits (600), Expect = 1e-64
Identities = 183/608 (30%), Positives = 305/608 (50%), Gaps = 62/608 (10%)
Query: 5 ITQHFERIRIARSCALELNQAPVFALAPHLTSFETEQHYLRQISELIIMFLLPRCYSLAP 64
+T HF+ +R+A A F L LTS + E YLR+IS++I+ L S P
Sbjct: 163 LTNHFQSLRLADQ-RNSPETAEAFVLHHCLTSKKAELDYLRKISDVILYCFLSERNSQCP 221
Query: 65 GCH-LMREILACKILQPAIDLVTEPDYINQKIIQYLEAQKEVNAMHIRTHEYAKTFEDYI 123
L+REILA + QP D++ +PDYINQ ++ YLEA++ + A H + YA+T+ED+I
Sbjct: 222 EMRVLLREILAYSVFQPLADMLCDPDYINQTVLIYLEAKETLTAKHKPRYAYAETYEDFI 281
Query: 124 RLINSCNNVDTLKRLRYDIVTQIMQATTLQNVKRAKGIDLDAIEKSNTQHNISRQQITDA 183
R+IN+CN+V+ LK++RY I+ +IMQATT+ N+ +GI+ + N N Q T
Sbjct: 282 RMINTCNSVEELKQIRYHIIAEIMQATTINNL---RGIEKQNQQTDNQPLNKDAQLRT-- 336
Query: 184 KKLQRYINQLTIAKAECETALRKMGWDGAF--------PTFETDSKTLPLHKV------- 228
+ L+RYINQ T+AKA+CE ++ +G P+ + K P +KV
Sbjct: 337 RNLKRYINQCTVAKAQCEKRIKLLGGPDYTSHNQAENKPSTTPEQKPKPTNKVTGPTKML 396
Query: 229 -----MDSVTGRRYLSMFLEKMC-SQGLVGFWTSVEDLRHSPRSSWHQLGAEIFYTYIRS 282
MD+ R + FL+ S+ L+ FW ++E+LR + + +I+ Y+ +
Sbjct: 397 SFAEIMDNSLARSFFMSFLQNHTHSRNLLSFWMAIENLRLVKPAEIVKSTHDIYQVYV-A 455
Query: 283 PSAE--IKVDKDTRKRMESFLLGDKGPDVFYEVQETVLDTIQDKYYHSFLMSEEYKALIA 340
PS++ I +D + ME FL G +G F+ Q+ V +++K+Y F++S+EY +
Sbjct: 456 PSSDKSIMLDTSLVRDMEGFLNGTEGLQSFFTAQKKVYQHLEEKFYRRFVLSQEYFMFVC 515
Query: 341 ELATE-ENSKDTNVDRSPIEERQLSNXXXXXXXXXXGALHLTEHSTYARRKLDQLQERHN 399
+L E ++ + D IE G + + + RK ++ER
Sbjct: 516 QLEAEMDDLRAQQKDEDNIELNWNDRVEGSNDEEDGGK---GDSTVKSGRKHSTIEERSE 572
Query: 400 NKIQALAALRASLKPESPALSMLANEVEKLAGEQMRLEAHLARTDTWAEHLGRWRASVHS 459
+ ++ L L L ++ + ++ A W +W +
Sbjct: 573 SIVKKLEVLDQRLAAKTHQMEVMKRSYGADA--------------EWNNEDDKW---IPL 615
Query: 460 ADVIDESKPPQFVIVVHMAEKEDSNSGDR-PEQITTGWVLLRTLNEFQDLHRKLRPLCSE 518
++ P +++ S DR P + GWV+ R N+F+ LH KL+ S+
Sbjct: 616 YVIVVHCSP------INLPISPSGASPDRLPGATSEGWVVTRKFNDFKILHAKLKECSSK 669
Query: 519 LKNLELPSNSFKFLFGKNDKNSLDKAKTLIQKYLEFVLEDDRLNQSEALYTFLNPSSEYL 578
L N ELP+ + K+ + D L+K++ +++YL+ +L D+ L SE LY+FL+PS E+L
Sbjct: 670 LPN-ELPAPAKKW-YKSLDDEFLNKSRLALEQYLQSLLADETLCLSEELYSFLSPSPEHL 727
Query: 579 -KQEDMPK 585
KQ +PK
Sbjct: 728 RKQTSLPK 735
Score = 100 bits (240), Expect = 4e-21
Identities = 43/77 (55%), Positives = 59/77 (76%)
Query: 653 RDSTAEPLYALLSEVFDMRGVFRWLRKTLVTFVQITYGRTINRQIKDTISWLFSEQMLHY 712
+DS AEP YAL+ EVF+++GVFR LR+TL+ FVQIT+G TIN++I++ + WL SE M+ Y
Sbjct: 735 KDSIAEPFYALIGEVFELKGVFRLLRRTLIAFVQITFGGTINKEIQEMLEWLVSESMIVY 794
Query: 713 YISVVIKSWWPGGVLSE 729
YI S WPGG L++
Sbjct: 795 YIHTFRDSLWPGGQLAK 811
>SB_38344| Best HMM Match : PX (HMM E-Value=8.1e-21)
Length = 632
Score = 93.9 bits (223), Expect = 5e-19
Identities = 46/151 (30%), Positives = 83/151 (54%), Gaps = 4/151 (2%)
Query: 644 RGASAIAEERDSTAEPLYALLSEVFDMRGVFRWLRKTLVTF----VQITYGRTINRQIKD 699
+G A ++ + L L+ E+FD++ WLR+ ++ ++ TYG INR+I +
Sbjct: 455 KGQFARKDDDNIALRVLLLLMDEIFDLKDRNLWLRRRIIVLLRQIIKTTYGDRINRKIVE 514
Query: 700 TISWLFSEQMLHYYISVVIKSWWPGGVLSEHGSNRNFQDKEHTRTLALQQLSESVMDALS 759
+++W+ S + + Y+ + +S+WPGGVL+E R K TR A ++ S+ D L
Sbjct: 515 SVNWMTSAEQIAEYVKMFRESFWPGGVLAESAPERASDIKLRTRVAAKTKMYGSIPDDLK 574
Query: 760 SLVGAQTAARGAHKLFHTLQHTTHNKQLFYV 790
+G + G ++F T Q+T+ NK+L Y+
Sbjct: 575 RFLGTEVTLDGICRVFDTFQYTSLNKRLMYL 605
Score = 45.2 bits (102), Expect = 2e-04
Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 8/132 (6%)
Query: 232 VTGRRYLSMFLEKMCSQGLVGFWTSVEDLRHSPRSSWHQLGAEIFYTYIRSPSAEIKVD- 290
VT + LS+ +E+ SQ +S+ L + + A+ + S A+ KVD
Sbjct: 170 VTAEQQLSVSMERQLSQDSS---SSLRKLPIAADLGDLRTAAKSIFDQYLSEQADAKVDL 226
Query: 291 -KD-TRKRMESFLLGDKGPDVFYEVQETVLDTI-QDKYYHSFLMSEEYKALIAEL-ATEE 346
KD +K + + PD F E Q+ V + + QD++Y SFL S+ Y + EL +E
Sbjct: 227 PKDMVKKTWKKVSQEEPCPDCFDEAQKWVFEILGQDQFYTSFLNSQTYMRCLIELDVLKE 286
Query: 347 NSKDTNVDRSPI 358
S+D +VD + I
Sbjct: 287 RSEDGDVDTASI 298
Score = 44.4 bits (100), Expect = 4e-04
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 493 TTGWVLLRTLNEFQDLHRKLRPLCSELKNLELPSNSFKFLFGKNDKNSLDKAKTLIQKYL 552
T W + R ++F DLH L+ L NL LP K F DK+ L+K + + Y+
Sbjct: 367 TNSWTIYRRYSDFDDLHMHLKNKFGPLPNLLLPG---KRTFRNMDKDFLEKRRAALDSYI 423
Query: 553 EFVLEDDRLNQSEALY 568
+ +L D L++ ++
Sbjct: 424 QTLLSTDFLDKYPGMF 439
>SB_36894| Best HMM Match : PXA (HMM E-Value=2.5e-13)
Length = 1252
Score = 45.6 bits (103), Expect = 2e-04
Identities = 21/62 (33%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Query: 39 TEQHYLRQISELIIMFLLP-RCYSLAPGCHLMREILACKILQPAIDLVTEPDYINQKIIQ 97
+E +YLR + + ++ LLP + Y+ G ++REILA + ++ ++L+++PD++N+ II
Sbjct: 412 SELNYLRNVVDCLLAVLLPQKAYNCDMGKFILREILAVQAVE-LVELISDPDWVNEAIID 470
Query: 98 YL 99
L
Sbjct: 471 LL 472
>SB_39904| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 40.7 bits (91), Expect = 0.005
Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 3/116 (2%)
Query: 226 HKVMDSVTGRRYLSMFLEKMCSQGLVGFWTSVEDLRH-SPRSSWHQLGAEIFYTYIRSPS 284
H ++ S G FL + + FW +VED R R S + I+ Y+ + S
Sbjct: 137 HALLSSKYGVNQFQEFLRSQYGEENLCFWLAVEDYRRLEDRESRRDMARMIYEDYVSTLS 196
Query: 285 -AEIKVDKDTRKRMESFLLGDKGPDVFYEVQETVLDTIQDKYYHSFLMSEEYKALI 339
EI +D R ++ + D + F Q+ + + + F+ S+ YK LI
Sbjct: 197 PTEISLDAKIRATVDK-SMSDPDQNTFDPAQDHIYTLMYHDCFPRFIKSKHYKNLI 251
>SB_5676| Best HMM Match : RGS (HMM E-Value=1.5e-38)
Length = 126
Score = 40.7 bits (91), Expect = 0.005
Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 3/116 (2%)
Query: 226 HKVMDSVTGRRYLSMFLEKMCSQGLVGFWTSVEDLRH-SPRSSWHQLGAEIFYTYIRSPS 284
H ++ S G FL + + FW +VED R R S + I+ Y+ + S
Sbjct: 9 HALLSSKYGVNQFQEFLRSQYGEENLCFWLAVEDYRRLEDRESRRDMARMIYEDYVSTLS 68
Query: 285 -AEIKVDKDTRKRMESFLLGDKGPDVFYEVQETVLDTIQDKYYHSFLMSEEYKALI 339
EI +D R ++ + D + F Q+ + + + F+ S+ YK LI
Sbjct: 69 PTEISLDAKIRATVDK-SMSDPDQNTFDPAQDHIYTLMYHDCFPRFIKSKHYKNLI 123
>SB_8804| Best HMM Match : RGS (HMM E-Value=1.5e-37)
Length = 712
Score = 37.9 bits (84), Expect = 0.034
Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 5/117 (4%)
Query: 223 LPLHKVMDSVTGRRYLSMFLEKMCSQGLVGFWTSVEDLRH-SPRSSWHQLGAEIFYTYIR 281
L K+MD G FL+K S+ + FW + E+ R S + IF T++
Sbjct: 40 LGFDKLMDDQAGLHCFEEFLKKEFSEENIVFWIACEEFRSISDPKKLKSAASTIFETHL- 98
Query: 282 SPSA--EIKVDKDTRKRMESFLLGDKGPDVFYEVQETVLDTIQDKYYHSFLMSEEYK 336
SP+A + +D K E LL ++ Q+ V ++ Y FL S+ Y+
Sbjct: 99 SPNALMPVNIDSSAVKVAEEHLLNPTN-HMYRVSQQQVYTLMKFDSYPRFLKSDLYR 154
>SB_46677| Best HMM Match : RGS (HMM E-Value=7.5e-31)
Length = 243
Score = 37.1 bits (82), Expect = 0.059
Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 3/110 (2%)
Query: 234 GRRYLSMFLEKMCSQGLVGFWTSVEDL-RHSPRSSWHQLGAEIFYTYIRSPS-AEIKVDK 291
G R FL+ S+ + FW +VE L + + +S L I+ Y+ + S E+ +D
Sbjct: 131 GIRVFHEFLKSEYSEENLLFWLAVERLKKETEPASVKNLAQTIYNDYVSTESPKEVSIDH 190
Query: 292 DTRKRMESFLLGDKGPDVFYEVQETVLDTIQDKYYHSFLMSEEYKALIAE 341
TR+ ++ + + F + Q+ V + Y FL S +K L E
Sbjct: 191 KTRQVIDD-EISQPTKETFSKAQQHVYYVMYQDCYPRFLSSSTFKTLQQE 239
>SB_17934| Best HMM Match : PX (HMM E-Value=2e-19)
Length = 586
Score = 34.7 bits (76), Expect = 0.31
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 496 WVLLRTLNEFQDLHRKLRPLCSE-LKNLELPSNSFKFLFGKNDKNS-LDKAKTLIQKYLE 553
W + R +EF + LR + +E + LP F G N +N ++ K +Q+YL
Sbjct: 55 WFVFRRYSEFARMDENLRKMFTERFPDCSLPPKRF---LGDNFENCFIEMRKNALQEYLN 111
Query: 554 FVLEDDRLNQSEALYTFL 571
+L D ++ S+ + FL
Sbjct: 112 CILSRDDISGSQPVVEFL 129
>SB_49662| Best HMM Match : Bromodomain (HMM E-Value=9.8e-38)
Length = 1301
Score = 34.3 bits (75), Expect = 0.41
Identities = 49/244 (20%), Positives = 102/244 (41%), Gaps = 17/244 (6%)
Query: 412 LKPESPALSMLANEVE-KLAGEQMRLEAHLARTDTWAEHLGRWRASVHSADVIDESKPPQ 470
L E+P +S A + E K ++ +LEA R + G+ + V S+ ES+
Sbjct: 74 LYKETPEVSQEAKDKELKKEKKKKKLEAKKKRKQK-KKQKGKKKKRVSSSS---ESESDF 129
Query: 471 FVIVVHMAEKEDSNSGDRPEQITTGWVLL-RTLNEFQDLHRKLRPLCSELKNLELPSNSF 529
E+ + E+ W+L+ T E+++L + S+ ++ ++ +
Sbjct: 130 ITSSSSEESSEEDTEEENSEKKGPQWMLVCSTATEWEELAESFKK--SKNRDEKMLYQTL 187
Query: 530 KFLFGKNDKNSLDKAKTLIQKYLEFVLEDDRLNQSEALYTFLNPSSEYLKQEDMPKKNKF 589
F +D + +QK L + R ++ AL + L + +++D ++
Sbjct: 188 SEDFVPEITKMIDTKEKALQKKLLLEMAPRRASERIALKSSLRDEED--REDDEEEQ--- 242
Query: 590 SLSTLFKSASSEATNRSSQEKEAFNHMSADEDEISMYLDGNGAEAGNKTMTNSLRGASAI 649
L K ++E+ + +EKE + A++ + + +L G G E + T + +
Sbjct: 243 ----LDKERAAESKKQEDEEKEKEKQLVAEKRQKAFWLSGTGREKSGGSGTQERAERARL 298
Query: 650 AEER 653
EER
Sbjct: 299 REER 302
>SB_36254| Best HMM Match : Filament (HMM E-Value=0.21)
Length = 589
Score = 33.9 bits (74), Expect = 0.55
Identities = 53/260 (20%), Positives = 108/260 (41%), Gaps = 18/260 (6%)
Query: 377 ALHLTEHSTYARRKLDQLQ---ERHNNKIQALAALRASLKPESPALSMLANE--VEKLAG 431
AL L E +++KL + + E KI+AL LK + +S+ +E +E+L
Sbjct: 107 ALKLKEDYMISQKKLSETEANLENAQQKIEALQKESERLKDKLSEMSVPNSEDGLEELHN 166
Query: 432 EQMRLEAHLARTDTWAEHLGRWRASVHSADVIDESKPPQFV--IVVHMAEKEDSNSGDRP 489
E L+ +R + + L + ++ D K + H E ++ + G R
Sbjct: 167 ENEFLKIQASRLEDQKKALEQEVQTLKKIIANDRDKKEEESKDFSRHFREMQNRSEGYRR 226
Query: 490 EQITTGWVLLRTLNEFQDLHRKLRPLCSELKN-LELPSNSFKFLFGKNDKNSLDKAKTLI 548
E I +++ + + L + LK LE + + +NDKN ++ K
Sbjct: 227 ENIEKQ----AQIDQMRSKNNMLETENANLKKRLEDKDQDLRNITAENDKNKVENYKL-- 280
Query: 549 QKYLEFVLEDDRLNQSEALYTFLNPSSEYLKQEDMPKKNKFSLSTLFKSASSEATNRSSQ 608
K +F ED + E + + + S + K+ +M ++ K +L ++ + + +
Sbjct: 281 -KTAKFSAED---SLREEVGSLKSKSDDLEKEREMLQREKNALQRELRNVREKLMDVENV 336
Query: 609 EKEAFNHMSADEDEISMYLD 628
K++ N + + E+ D
Sbjct: 337 HKQSSNALESATGEMQTARD 356
>SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10)
Length = 2478
Score = 33.9 bits (74), Expect = 0.55
Identities = 47/217 (21%), Positives = 94/217 (43%), Gaps = 13/217 (5%)
Query: 281 RSPSAEIKVDKDTRKRMESFLLGDKGPDVFYEVQETVLDTIQDKYYHSFLMSEEYKALIA 340
+ PS++ +DK ++ E F + ++ + E + ++ + + L +E++K++
Sbjct: 903 KEPSSDQDIDKMRKETEEKFKTDLQDTELKLKDAEAKIKDLETQLEQAKLHAEQFKSMSG 962
Query: 341 --ELATEENSKDTNVDRSPIEE--RQLSNXXXXXXXXXXGALHLTEHSTYARRKLDQLQE 396
+ A E +K T +S +E R G + T KL + E
Sbjct: 963 ANDEALREVNKSTEEFKSNMESQVRAAKEQASFLQGQVQGLEINNSNLTVENSKLKRESE 1022
Query: 397 RHNNKIQ-ALAALRASL-KPESPALSMLANEVEKLAGEQMRLEAHLARTDTWAEHLGRWR 454
R ++Q L LR L + + A S ANE+ +A E++R + +A E R
Sbjct: 1023 RQIKELQEILGTLRKELDEAHNQARSACANEL--VAMEELREQTKIA--SECQEKYER-E 1077
Query: 455 ASVHSADV--IDESKPPQFVIVVHMAEKEDSNSGDRP 489
+H+ DV + ++K + V + ++K ++ D P
Sbjct: 1078 LMLHAKDVQALSDAKEERLVNQMASSKKTSLSTSDMP 1114
Score = 33.1 bits (72), Expect = 0.96
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 16/159 (10%)
Query: 519 LKNLELPSNSFKFLFGKNDKNSLDKAKTLIQKYLEFVLEDDRLNQSEALYTFLNPSSEYL 578
L ++E SFK + +D+ K L+QK E + + + E S + L
Sbjct: 189 LDDIESQGTSFKIR-----EKRMDQEKVLLQKQNESLSAELKAKTEELATIRKEKSRDQL 243
Query: 579 KQEDMPKKNKFS----LSTLFKSASSEATNRSSQEKEAFNHM------SADEDEISMYLD 628
+ + KN+ + L+ L+K S E+ R+ + + A + + + DE ++ L+
Sbjct: 244 AKSEEHFKNELASQSRLADLYKDESEESKKRAKEMQTAMDELQKLLKEAVDESKVHA-LE 302
Query: 629 GNGAEAGNKTMTNSLRGASAIAEERDSTAEPLYALLSEV 667
A + RGA+ ++EE ST P A S +
Sbjct: 303 TELNNANDLLEAARQRGAAPMSEEMLSTLSPTAAATSSL 341
>SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19)
Length = 3107
Score = 33.9 bits (74), Expect = 0.55
Identities = 53/260 (20%), Positives = 108/260 (41%), Gaps = 18/260 (6%)
Query: 377 ALHLTEHSTYARRKLDQLQ---ERHNNKIQALAALRASLKPESPALSMLANE--VEKLAG 431
AL L E +++KL + + E KI+AL LK + +S+ +E +E+L
Sbjct: 2635 ALKLKEDYMISQKKLSETEANLENAQQKIEALQKESERLKDKLSEMSVPNSEDGLEELHN 2694
Query: 432 EQMRLEAHLARTDTWAEHLGRWRASVHSADVIDESKPPQFV--IVVHMAEKEDSNSGDRP 489
E L+ +R + + L + ++ D K + H E ++ + G R
Sbjct: 2695 ENEFLKIQASRLEDQKKALEQEVQTLKKIIANDRDKKEEESKDFSRHFREMQNRSEGYRR 2754
Query: 490 EQITTGWVLLRTLNEFQDLHRKLRPLCSELKN-LELPSNSFKFLFGKNDKNSLDKAKTLI 548
E I +++ + + L + LK LE + + +NDKN ++ K
Sbjct: 2755 ENIEKQ----AQIDQMRSKNNMLETENANLKKRLEDKDQDLRNITAENDKNKVENYKL-- 2808
Query: 549 QKYLEFVLEDDRLNQSEALYTFLNPSSEYLKQEDMPKKNKFSLSTLFKSASSEATNRSSQ 608
K +F ED + E + + + S + K+ +M ++ K +L ++ + + +
Sbjct: 2809 -KTAKFSAED---SLREEVGSLKSKSDDLEKEREMLQREKNALQRELRNVREKLMDVENV 2864
Query: 609 EKEAFNHMSADEDEISMYLD 628
K++ N + + E+ D
Sbjct: 2865 HKQSSNALESATGEMQTARD 2884
>SB_7846| Best HMM Match : CoCoA (HMM E-Value=0.00016)
Length = 1284
Score = 33.5 bits (73), Expect = 0.72
Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 6/148 (4%)
Query: 45 RQISELIIMFLLPRCYSLAPGCHLMREILACKILQPAIDLVTEPDYINQKIIQYLEAQKE 104
++ EL I+ R S H RE L + +Q ++ + D +Q + KE
Sbjct: 626 KKTEELAILLEQERIQSCE--VHKTREKLVTEKIQFLQNIASNRDLADQLSVDLAAKAKE 683
Query: 105 VNAMHIRTHEYAKTFEDYIRLINSC--NNVDTLKRLRYDIVTQIMQATTLQNVKRAKGID 162
V AM R + + I +NSC V + LR ++ + A++++ K
Sbjct: 684 VKAMESRLSDERAHHQQKISKLNSCLEEAVSDMNSLRDELNKEKEAASSMKMTLEKKA-- 741
Query: 163 LDAIEKSNTQHNISRQQITDAKKLQRYI 190
+A+EKS R + ++ K L + +
Sbjct: 742 KEALEKSQIVEIALRDKESEIKLLNKKV 769
>SB_27687| Best HMM Match : zf-B_box (HMM E-Value=6.7e-10)
Length = 237
Score = 32.7 bits (71), Expect = 1.3
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Query: 379 HLTEHSTYARRKLDQLQERHNNKIQALAALRASLKPESPALSMLANEVEKLAGEQMRLEA 438
HL E+ ARR LDQL ++ +I AL +R+ L+ E S + ++L ++ L
Sbjct: 81 HLDENKRAARRDLDQLIDK---QIGALEKMRSDLRGEIE--SACQKQEKQLTAQRENLSM 135
Query: 439 HLARTDTWAEHLGRWRASVHSADVIDESK 467
LA + E R + DV+ K
Sbjct: 136 RLANARSSLEFAERMCREANDVDVLSIRK 164
>SB_10355| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0037)
Length = 1127
Score = 32.3 bits (70), Expect = 1.7
Identities = 51/275 (18%), Positives = 110/275 (40%), Gaps = 18/275 (6%)
Query: 389 RKLD-QLQERHNNKIQALAALRASLKPESPALSMLANEVEKLAGEQMRLEAHLARTDTWA 447
R++D Q+Q +H++ +Q L S K S AL+ + +L + + + A +
Sbjct: 327 REMDGQVQNKHSDAVQLSRELEESRKETSNALAEVRELQNELVISRKKCKDQGAEISRQS 386
Query: 448 EHLGRWRASVHSADVIDESKPPQFVIVVHMAEKEDSNSGDRPEQITTGWVLLRTLNEFQD 507
H+G+ A+ S + S + K + + + +Q T + + + Q
Sbjct: 387 SHIGKLEATKLSQETNIRSLKANINELNSKLSKYEGDYEELEKQYKTHF--MESGEHIQS 444
Query: 508 LHRKLRPLCSELKNLELPSNSFKFLFGKNDKNSLDKAKTLIQKYLEFVLEDDRLNQSEAL 567
L ++ + ++ LE+ K L K S + + ++ LE + + + L
Sbjct: 445 LKEEISKVTAQ--KLEIEGKYLKEL--NLSKESASERENKLKSELEETSKRLKAEHTSEL 500
Query: 568 YTFLNPSSEYLKQEDMPKKNKFSLSTLFKSASSEATNRSSQEKEAFNHMSADEDEISMYL 627
T + + L++ D+ K + A +E ++ +A + + + DE+ L
Sbjct: 501 ETLHSEYKDKLRKLDVELK---------EQAQNEKATLLLEKSQAVSKIEKECDELKRKL 551
Query: 628 DGNGAEAG--NKTMTNSLRGASAIAEERDSTAEPL 660
+ EA N + S +G + + DS + L
Sbjct: 552 NNIEVEAARLNSLVQESEKGLGSASSHIDSLKQSL 586
>SB_56568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 397
Score = 32.3 bits (70), Expect = 1.7
Identities = 61/298 (20%), Positives = 113/298 (37%), Gaps = 14/298 (4%)
Query: 330 LMSEEYKALIAELATEENSKDTNVDRSPIEERQLSNXXXXXXXXXXGALH---LTEHSTY 386
L+ E K L EL T+E S D+ + +L + LT+ +
Sbjct: 91 LLETERKRLEEELKTKEKSYSKIEDKCRSMKDKLGHYDDLEDKVYRYERERKSLTKENKE 150
Query: 387 ARRKLDQLQERHNNKIQALAALRASLKPESPALSMLANEVEK----LAGEQMRLEAHLAR 442
+ +L+ L+ N + L E L NE EK L E+ L + L +
Sbjct: 151 LKEELEDLKISKNELEEKKLGLEKKKTSEIEDLEKERNEAEKKYNSLRKEKENLVSELTK 210
Query: 443 TDTWAEHLGRWRASVHSADVIDESKPPQFVIVVHMAEKEDSNSGDRPEQITTGWVLLRTL 502
E G+ + V V+ +S + + +D N + T + +
Sbjct: 211 KFEMLE--GQKSSLVEENKVLQDSVKDLKIRL--KKSNQDLNKITEELKSTLEEIEMVKK 266
Query: 503 NEFQDLHRKLRPLCSELKNLELPSNSFKFLFGKNDKNSLDKAKTLIQKYLEFVLEDDRLN 562
+DL K+ L E NLE +N ++ + K + A L + Y E +E +
Sbjct: 267 KGNKDLEEKVGVLSKEKSNLEKEANKYRKQREETQKTCEELASKLSKAYAE--IEKMKSE 324
Query: 563 QSEALYTFLNPSSEYLKQEDMPKKNKFSLSTLFKSASSEATNRSSQEKEAFNHMSADE 620
+EA + ++P ++ L P + SL+ L + +A + S ++ ++ D+
Sbjct: 325 NTEAASSDMHP-TKVLASTLKPNNSTGSLTNLKSNKERKAESPLSIKRSKYHTRERDQ 381
>SB_49264| Best HMM Match : Ank (HMM E-Value=3.7e-22)
Length = 775
Score = 31.5 bits (68), Expect = 2.9
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 530 KFLFGKNDKNSLDK-AKTLIQKYLEFVLEDDRLNQSEALYTFLNPS--SEYLKQEDMPKK 586
+ L GK + K AK L ++E LE D ++A L+P EY+ + P K
Sbjct: 148 RILNGKPGDTYMPKLAKKLTHVFVEKSLECDVEGLAKAGVPCLSPDYIPEYILRHPKPCK 207
Query: 587 NKFSLSTLFKSASSEATNRSSQE 609
++FS+S S+ A N+S ++
Sbjct: 208 DEFSISIYTHLTSTTAQNKSHKD 230
>SB_3141| Best HMM Match : Vicilin_N (HMM E-Value=4.1)
Length = 287
Score = 31.5 bits (68), Expect = 2.9
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 578 LKQEDMPKKNKFSLSTLFKSASSEATNRSSQEKEAFNHMSADEDEISMYLDGNGAEAGNK 637
+++ED ++++ L T + SS + NR EKE +N +DE +Y + + K
Sbjct: 109 IREED-EEESEPQLKTKTDTYSSPSRNRDHAEKENYNCDENSDDE-DVYHEVSYLRLAAK 166
Query: 638 TMTNSLRGASAIAEERDSTAEPL 660
N L GAS I+E D + L
Sbjct: 167 GSNNYL-GASEISERGDCAGDKL 188
>SB_1933| Best HMM Match : PI3_PI4_kinase (HMM E-Value=4.06377e-44)
Length = 915
Score = 31.5 bits (68), Expect = 2.9
Identities = 20/81 (24%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 498 LLRTLNEFQDLHRKLRPLCSELKNLELPSNSFKFLFGKNDKNSL-DKAKTLIQKYLEFVL 556
+ R F +LH KL L ++ LP+ + G++ ++ ++ + + +L +L
Sbjct: 502 VFRRFGHFIELHAKLSELYPDIALPRLPARIY---LGRSQIRTVAERRRAELDTFLRHLL 558
Query: 557 E-DDRLNQSEALYTFLNPSSE 576
+++S+ LYTFL+P E
Sbjct: 559 MMPQEISESDVLYTFLHPIPE 579
>SB_21029| Best HMM Match : PX (HMM E-Value=9.1e-15)
Length = 1466
Score = 30.7 bits (66), Expect = 5.1
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 496 WVLLRTLNEFQDLHRKLRPLCSELKNLELPSNSFKFLFGKNDKNSLDKAKTLIQKYLEFV 555
W++ + EF++LH KL ++L LP + FG D + ++ + L++ YL +
Sbjct: 780 WLVRKRYREFRELHDKLVKEYHIDQSL-LPPKKY---FGNLDPDYIETRRLLLEIYLHKL 835
Query: 556 LEDDRLNQSEALYTFL 571
LE N + L FL
Sbjct: 836 LEKFEDNLPDQLDNFL 851
>SB_1298| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1668
Score = 30.7 bits (66), Expect = 5.1
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 774 LFHTLQHTTHNKQLFYVSLPRSTNTYLGIMIDSLYPFRFAGHLKLTLSFLTPTKILIINA 833
L + L + T+ +Q F++ LP + D+ P RF + L S+L+P K L
Sbjct: 750 LSNDLDNPTYGEQ-FHIPLPEGGSQISLAEFDTQSPIRFRWYNLLNYSYLSPLKTLNKGQ 808
Query: 834 PATGVGSPTLI 844
A+ V SP L+
Sbjct: 809 MASAV-SPNLM 818
>SB_41748| Best HMM Match : Transposase_14 (HMM E-Value=0.79)
Length = 270
Score = 30.7 bits (66), Expect = 5.1
Identities = 32/151 (21%), Positives = 61/151 (40%), Gaps = 6/151 (3%)
Query: 514 PLCSELKNLELPSNSFKFLFGKNDKNSLDKAKTLIQKYLEFVLEDDRLNQSEALYTFLNP 573
PL S L N + + F+F+ +NS + YL + L D R + +++ T+ P
Sbjct: 19 PLWSSLTNRSVFDHRFRFIIVWKSRNSTPSHFVHVTSYLRYPL-DARTVKLKSIKTYYIP 77
Query: 574 -SSEYLKQEDMPKKNKFSLSTL-FKSASSEATNRS--SQEKEAFNHMSAD-EDEISMYLD 628
+E+ + K+ F L ++S S NR+ + + + F + D + +
Sbjct: 78 VHNEHASNKKASPKSFFRSDGLHYRSNYSRCINRTIGNFDLDLFEEIRRDCVQRLFKHHH 137
Query: 629 GNGAEAGNKTMTNSLRGASAIAEERDSTAEP 659
+ E T + RG + +E P
Sbjct: 138 DDNKEMSKDRQTRAPRGDTETGQEEKENLTP 168
>SB_54597| Best HMM Match : zf-B_box (HMM E-Value=4e-17)
Length = 755
Score = 30.3 bits (65), Expect = 6.7
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Query: 379 HLTEHSTYARRKLDQLQERHNNKIQALAALRASLKPESPALSMLANEVEKLAGEQMRLEA 438
HL E+ ARR LDQ ++ +I AL +R+ L+ E S + ++L ++ L
Sbjct: 169 HLDENKRAARRDLDQFIDK---QIGALEKMRSDLRGEIE--SACQKQEKQLTAQRENLSM 223
Query: 439 HLARTDTWAEHLGRWRASVHSADVI 463
LA + E R + DV+
Sbjct: 224 RLASARSSLEFAERMCREANDVDVL 248
>SB_28019| Best HMM Match : KNOX2 (HMM E-Value=0.24)
Length = 318
Score = 30.3 bits (65), Expect = 6.7
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Query: 379 HLTEHSTYARRKLDQLQERHNNKIQALAALRASLKPESPALSMLANEVEKLAGEQMRLEA 438
HL E+ ARR LDQ ++ +I AL +R+ L+ E S + ++L ++ L
Sbjct: 38 HLDENKRAARRDLDQFIDK---QIGALEKMRSDLRGEIE--SACQKQEKQLTAQRENLSM 92
Query: 439 HLARTDTWAEHLGRWRASVHSADVI 463
LA + E R + DV+
Sbjct: 93 RLASARSSLEFAERMCREANDVDVL 117
>SB_18515| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 30.3 bits (65), Expect = 6.7
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Query: 379 HLTEHSTYARRKLDQLQERHNNKIQALAALRASLKPESPALSMLANEVEKLAGEQMRLEA 438
HL E+ ARR LDQ ++ +I AL +R+ L+ E S + ++L ++ L
Sbjct: 231 HLDENKRAARRDLDQFIDK---QIGALEKMRSDLRGEIE--SACQKQEKQLTAQRENLSM 285
Query: 439 HLARTDTWAEHLGRWRASVHSADVI 463
LA + E R + DV+
Sbjct: 286 RLASARSSLEFAERMCREANDVDVL 310
>SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3297
Score = 30.3 bits (65), Expect = 6.7
Identities = 29/134 (21%), Positives = 49/134 (36%), Gaps = 4/134 (2%)
Query: 427 EKLAGEQMRLEAHLARTDTWAEHLGRWRASVHSADVIDESKPPQFVIVVHMAEKEDSNSG 486
EK G + R+ + +T A +W + + V E KP
Sbjct: 776 EKAKGNERRISNQMTKTQIEALKGKKWTLNAKNKVVSSEGKPVHLSFAHQRVAHRGRQKT 835
Query: 487 DRPEQITTGWVLLRTLNEFQDL---HRKLRPLCSELKNLELPSNSFKFL-FGKNDKNSLD 542
++ Q V + +N F L H + +P+ S +K + P + FL F + D
Sbjct: 836 EKWIQDNFAEVTQKVINVFVQLCKYHAEQKPITSRVKEVTKPFQAPTFLSFIELDLMDFR 895
Query: 543 KAKTLIQKYLEFVL 556
K L++VL
Sbjct: 896 NTPCKCSKRLQWVL 909
>SB_1571| Best HMM Match : zf-C2H2 (HMM E-Value=1.2e-16)
Length = 265
Score = 30.3 bits (65), Expect = 6.7
Identities = 9/48 (18%), Positives = 25/48 (52%)
Query: 86 TEPDYINQKIIQYLEAQKEVNAMHIRTHEYAKTFEDYIRLINSCNNVD 133
+EP+ ++ +L+ ++ RTH++ + ++N+C N++
Sbjct: 212 SEPNEYRAAVLAWLDKERRARCPRYRTHKHPNNVKKPSTMLNTCTNIE 259
>SB_884| Best HMM Match : KNOX2 (HMM E-Value=0.24)
Length = 233
Score = 30.3 bits (65), Expect = 6.7
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Query: 379 HLTEHSTYARRKLDQLQERHNNKIQALAALRASLKPESPALSMLANEVEKLAGEQMRLEA 438
HL E+ ARR LDQ ++ +I AL +R+ L+ E S + ++L ++ L
Sbjct: 10 HLDENKRAARRDLDQFIDK---QIGALEKMRSDLRGEIE--SACQKQEKQLTAQRENLSM 64
Query: 439 HLARTDTWAEHLGRWRASVHSADVI 463
LA + E R + DV+
Sbjct: 65 RLASARSSLEFAERMCREANDVDVL 89
>SB_2192| Best HMM Match : rve (HMM E-Value=4e-23)
Length = 491
Score = 30.3 bits (65), Expect = 6.7
Identities = 29/134 (21%), Positives = 49/134 (36%), Gaps = 4/134 (2%)
Query: 427 EKLAGEQMRLEAHLARTDTWAEHLGRWRASVHSADVIDESKPPQFVIVVHMAEKEDSNSG 486
EK G + R+ + +T A +W + + V E KP
Sbjct: 46 EKAKGNERRISNQMTKTQIEALKGKKWTLNAKNKVVSSEGKPVHLSFAHQRVAHRGRQKT 105
Query: 487 DRPEQITTGWVLLRTLNEFQDL---HRKLRPLCSELKNLELPSNSFKFL-FGKNDKNSLD 542
++ Q V + +N F L H + +P+ S +K + P + FL F + D
Sbjct: 106 EKWIQDNFAEVTQKVINVFVQLCKYHAEQKPITSRVKEVTKPFQAPTFLSFIELDLMDFR 165
Query: 543 KAKTLIQKYLEFVL 556
K L++VL
Sbjct: 166 NTPCKCSKRLQWVL 179
>SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10)
Length = 2155
Score = 29.9 bits (64), Expect = 8.9
Identities = 28/157 (17%), Positives = 68/157 (43%), Gaps = 6/157 (3%)
Query: 287 IKVDKDTRKRMESFL--LGDKGPDVFYEVQETVLDTIQDKYYHSFLMSEEYKALIAELAT 344
IK ++ +++M++ + + + ++ ++++ + ++DK + EE + L AE +
Sbjct: 293 IKSTREEKEKMKAEIEKISSEKHEICTKLRQEFEEALKDKDDVLSSLREEMECLRAEKDS 352
Query: 345 EENSKDTNVDRSPIEERQLSNXXXXXXXXXXG----ALHLTEHSTYARRKLDQLQERHNN 400
++ DT + S IEE+ + G H + + +L+ +Q
Sbjct: 353 LVSNLDTRAEGSTIEEKIQAMDTERMVAASPGEYLNEAHSQDEIERLKLELEVVQREKEQ 412
Query: 401 KIQALAALRASLKPESPALSMLANEVEKLAGEQMRLE 437
++ +R +K E+ +S L + L + LE
Sbjct: 413 ILEEKDRIREIVKEENSMVSDLTENIRGLESSRQELE 449
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.131 0.378
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,198,830
Number of Sequences: 59808
Number of extensions: 1053572
Number of successful extensions: 2917
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 2890
Number of HSP's gapped (non-prelim): 53
length of query: 844
length of database: 16,821,457
effective HSP length: 88
effective length of query: 756
effective length of database: 11,558,353
effective search space: 8738114868
effective search space used: 8738114868
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 64 (29.9 bits)
- SilkBase 1999-2023 -