GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000890-TA|BGIBMGA000890-PA|IPR000342|Regulator of G
protein signalling, IPR001683|Phox-like, IPR003114|PX-associated,
IPR013937|Sorting nexin, C-terminal
         (844 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    24   5.0  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    24   5.0  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    23   6.6  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 9/28 (32%), Positives = 20/28 (71%), Gaps = 1/28 (3%)

Query: 497 VLLRTL-NEFQDLHRKLRPLCSELKNLE 523
           +L+R+  + ++DL++KL   C + K++E
Sbjct: 191 ILIRSFKSRYKDLNQKLETACEQSKSVE 218


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 11/48 (22%), Positives = 24/48 (50%)

Query: 585 KKNKFSLSTLFKSASSEATNRSSQEKEAFNHMSADEDEISMYLDGNGA 632
           KKN    +   ++ ++ ATN  +    A +H+ A    ++ ++  NG+
Sbjct: 299 KKNSQRQAAQQQNNNNAATNNQNHHHHAGHHIHAQHHVVNHHVAANGS 346


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 705 FSEQMLHYYISVVIKSWWPGGVLSEHGSNRNFQDKEHTRTLA-LQQLSESV 754
           FS + L         SW P  +    G N +F  KEH   L  L +  +SV
Sbjct: 3   FSFERLENTWRAFTASWSPDTLAKNLGINSSFVHKEHCYVLVRLARFRDSV 53


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.318    0.131    0.378 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,296
Number of Sequences: 317
Number of extensions: 7527
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 17
Number of HSP's gapped (non-prelim): 4
length of query: 844
length of database: 114,650
effective HSP length: 63
effective length of query: 781
effective length of database: 94,679
effective search space: 73944299
effective search space used: 73944299
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 47 (23.0 bits)