Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000890-TA|BGIBMGA000890-PA|IPR000342|Regulator of G
protein signalling, IPR001683|Phox-like, IPR003114|PX-associated,
IPR013937|Sorting nexin, C-terminal
(844 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC16A11.04 |snx12||sorting nexin Snx12 |Schizosaccharomyces po... 55 4e-08
SPCC1682.15 |mug122||PX/PXA domain protein|Schizosaccharomyces p... 34 0.071
SPBC19G7.14c |cog5||Golgi transport complex subunit Cog5 |Schizo... 31 0.66
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 31 0.66
SPBC839.16 |||C-1-tetrahydrofolate synthase|Schizosaccharomyces ... 30 1.2
SPCC61.01c |str2|str1, SPCC622.20c|siderophore-iron transporter ... 30 1.5
SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein Ndc80|... 29 2.7
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 29 3.5
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 29 3.5
SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4 |Schizosa... 29 3.5
SPAC30.03c |tsn1|tsn, mug90|translin|Schizosaccharomyces pombe|c... 28 4.7
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 28 4.7
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 28 4.7
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 28 6.2
SPAC16E8.07c |vph1||V-type ATPase subunit a|Schizosaccharomyces ... 28 6.2
SPBC577.06c |||phosphatidylinositol kinase |Schizosaccharomyces ... 28 6.2
SPAC23C11.16 |plo1||Polo kinase Plo1|Schizosaccharomyces pombe|c... 27 8.2
>SPCC16A11.04 |snx12||sorting nexin Snx12 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1010
Score = 55.2 bits (127), Expect = 4e-08
Identities = 47/213 (22%), Positives = 94/213 (44%), Gaps = 12/213 (5%)
Query: 376 GALHLTEHSTYARRKLDQLQERHN--NKIQALAALRASLKPESPALSMLANEVEKLAGEQ 433
G L L+E +++L+ + N N + A L A K + +L+ E+EK +
Sbjct: 621 GDLQLSESIDELNNNIEELKAQLNAINTLIKKAELVADQK-QLKSLTKNHQEIEKAIHRK 679
Query: 434 MRLEAHLARTDTWAEHLGRWRASVHSADVIDESKPPQFVIVVHMAEKEDSNSGDRPEQIT 493
R + ++ R R S+ S + E P F + E+ ++ +
Sbjct: 680 ERQRDQYMSQEEDSKLFNRSRVSIDSFKISKEENTPDFAVYTIRIERLENG------HVR 733
Query: 494 TGWVLLRTLNEFQDLHRKLRPLCSELKNLELPSNSFKFLFGKNDKNSLDKAKTLIQKYLE 553
+GW++ R EF +LH++L+ +++L+ P S + +KN L+ + +++YL+
Sbjct: 734 SGWMVARRYREFAELHKQLKQTYPGVRSLKFPQKS---IITSLNKNVLEYRRGALEEYLQ 790
Query: 554 FVLEDDRLNQSEALYTFLNPSSEYLKQEDMPKK 586
+ + S+ L FL+ + Q PK+
Sbjct: 791 SLFRMPEVCDSKMLRMFLSQQNITAPQMFNPKE 823
Score = 43.6 bits (98), Expect = 1e-04
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 21/130 (16%)
Query: 40 EQHYLRQISELIIMFLLPRCYSLAP-GCHLMREILACKILQPAIDLVTEPDYINQKIIQ- 97
++ YLR + ++ +LP Y +P L+ E++ L P + +++PD+ N IIQ
Sbjct: 211 QKRYLRNWTTQVLSIILPNYYETSPLVLSLVTEVIINTTLLPLVSYISDPDFFNYLIIQA 270
Query: 98 ---YLEAQK----------------EVNAMHIRTHEYAKTFEDYIRLINSCNNVDTLKRL 138
++ ++ +V A +R + +FE YI I +N+ +RL
Sbjct: 271 SGSIIQRRRKIRRLKRAIRKQSNHFQVGARRLRLKDSQHSFEQYIHEIKKISNISDARRL 330
Query: 139 RYDIVTQIMQ 148
R +++ Q Q
Sbjct: 331 RSELMVQRRQ 340
>SPCC1682.15 |mug122||PX/PXA domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 749
Score = 34.3 bits (75), Expect = 0.071
Identities = 20/79 (25%), Positives = 38/79 (48%)
Query: 26 PVFALAPHLTSFETEQHYLRQISELIIMFLLPRCYSLAPGCHLMREILACKILQPAIDLV 85
P A++ L E+ Q S +I+ F P + P L+RE+LA ++ +
Sbjct: 184 PESAVSKLLDQASIERTLRAQASAMIVKFSRPEDSACLPLHCLLREVLAMQVFKRITTHC 243
Query: 86 TEPDYINQKIIQYLEAQKE 104
+ P ++N+ II Y + ++
Sbjct: 244 SSPRFVNRCIILYFSSSED 262
>SPBC19G7.14c |cog5||Golgi transport complex subunit Cog5
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 411
Score = 31.1 bits (67), Expect = 0.66
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 557 EDDRLNQSEALYTFLNPSSEYLKQEDMPKKNKFSLSTLFKSASSEATNRSSQEKEAFNHM 616
E+++L++ L S + L + + K+ S+S L K TNRS KE +++
Sbjct: 149 ENEKLSRYYQASLLLQESDQLLSRFPLMKRQS-SVSLLLKL---NITNRSRIIKETSSYL 204
Query: 617 SADEDEISMYLDGNG 631
+ ED++S ++ NG
Sbjct: 205 LSQEDQLSFSVNSNG 219
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 31.1 bits (67), Expect = 0.66
Identities = 39/146 (26%), Positives = 62/146 (42%), Gaps = 10/146 (6%)
Query: 503 NEFQDLHRKLRPLCSELKNLELPSNSFKFLFGKNDK--NSLD-KAKTLIQKYLEFVLEDD 559
N+F + K R L SEL+ + +NS L KN K N L+ + L +K + +
Sbjct: 719 NQFGIISSKNRDLLSELEKSKSLNNSLAALESKNKKLENDLNLLTEKLNKKNADTESFKN 778
Query: 560 RLNQSEALYTFLNPSSEYLKQEDMPKKNKFS-LSTLFKSASSEATNRSSQEKEAFNHMSA 618
+ ++E LN + + KNK S ST + S+ +Q + +SA
Sbjct: 779 TIREAELSKKALNDNLGNKENIISDLKNKLSEESTRLQELQSQLNQDKNQIETLNERISA 838
Query: 619 DEDEISMYLDGNGAEAGNKTMTNSLR 644
DE+S E+ NK N L+
Sbjct: 839 AADELS------SMESINKNQANELK 858
>SPBC839.16 |||C-1-tetrahydrofolate synthase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 937
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 125 LINSCNNVDTLKRLRYDIVTQIMQATTL--QNVKRAKGIDLDAIEKSNTQ 172
LIN+C NVD+ RL YD+ I + + + + A GI+L + K +
Sbjct: 804 LINACENVDSEFRLLYDVHEPIEKKIEIIAKEMYGADGIELSPLAKERLE 853
>SPCC61.01c |str2|str1, SPCC622.20c|siderophore-iron transporter
Str2 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 597
Score = 29.9 bits (64), Expect = 1.5
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 7/93 (7%)
Query: 724 GGVLSEHGSNRNFQD-KEHTRTLALQQLSESVMDALSSLVGAQTAARGAHKLFHTLQHTT 782
GGV S+ S+R D K+H ++ + + ALS G Q + + +T
Sbjct: 502 GGVWSKRLSSRLLHDLKDHLPVPEIESIFRDLRTALSYPQGTQI------RNIINVAYTA 555
Query: 783 HNKQLFYVSLPRSTNTYLGIMIDSLYPFRFAGH 815
K LF++SL S + G++I P H
Sbjct: 556 TEKDLFHISLVASLFMFAGLVIIRDVPLSTENH 588
>SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein
Ndc80|Schizosaccharomyces pombe|chr 2|||Manual
Length = 624
Score = 29.1 bits (62), Expect = 2.7
Identities = 27/129 (20%), Positives = 51/129 (39%), Gaps = 1/129 (0%)
Query: 312 EVQETVLDTIQDKYYHSFLMSEEYKALIAELATEENSKDTNVDRSPIEERQLSNXXXXXX 371
E++ T QD Y + + + LI ++ + E D+ + R +
Sbjct: 258 ELKATFNQQNQDLYNQTEALKSTNEELINQIKSAEEL-DSAIQVLEERYRTMQRDEVKFQ 316
Query: 372 XXXXGALHLTEHSTYARRKLDQLQERHNNKIQALAALRASLKPESPALSMLANEVEKLAG 431
G E T ++L E +++Q L R SLK + + +E EK+
Sbjct: 317 SAMSGMKSKMESRTNLMKQLQVNIEEKESQLQLLKEKRDSLKYQVENQDISISEFEKMVS 376
Query: 432 EQMRLEAHL 440
E+ +L+ +L
Sbjct: 377 EREQLDRNL 385
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 28.7 bits (61), Expect = 3.5
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Query: 576 EYLKQEDMPKKNKFSLSTLFKSASSEATNRSSQEKEAFNHMSADEDEISMYLDGNGAEAG 635
E K E ++N+ S+S LFK + T+ +Q E +N + DE+ L E
Sbjct: 579 EIEKFEKTIRENEESIS-LFKEEVEKLTDEITQLSERYNDKCHEFDELQKRLQ-TLEEEN 636
Query: 636 NKTMTNSLRGASAIAEERDSTAEPLYALLSE 666
NK +S S + E+ T + +L E
Sbjct: 637 NKAKEDSTSKTSNLLEQLKMTEAEVDSLRKE 667
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 28.7 bits (61), Expect = 3.5
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 6/147 (4%)
Query: 477 MAEKEDS-NSGDRPEQITTGWVLLRTLNEFQDLHRKLRPLCSELKNLELPSNSFKFLFGK 535
+A ED+ +S DR E G L T N ++ L ++ E++ + + + +
Sbjct: 594 VAHLEDALHSKDR-ELANLGVELKSTENRYRQLLQEKEEEL-EIQKAAVDESLLQLSKLQ 651
Query: 536 NDKNSLDKAK-TLIQKYLEFVLE--DDRLNQSEALYTFLNPSSEYLKQEDMPKKNKFSLS 592
D+N +D+A T I + L+ LE DD ++ A +S Y M N+++
Sbjct: 652 LDRNDIDQAMDTQIDELLKSQLEKLDDIVDSVLATGIQRLDTSLYELDSPMHAGNQYATP 711
Query: 593 TLFKSASSEATNRSSQEKEAFNHMSAD 619
S A+N ++ AFN+ AD
Sbjct: 712 EFILSTIENASNNATDFSTAFNNYFAD 738
>SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 28.7 bits (61), Expect = 3.5
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 559 DRLNQSE--ALYTFLNPSSEYLKQEDMPKKNKFSLSTLFKSASSEATNRSSQEKEAFNHM 616
DR+ E +L+T NP Y K E+ +KF + FKS +S S +++
Sbjct: 98 DRITGQELWSLFTNANPGLSYTKDENSLLSSKFLSQSNFKSYNSTHGEFYSDSTLNISYL 157
Query: 617 SADE 620
S D+
Sbjct: 158 SDDD 161
>SPAC30.03c |tsn1|tsn, mug90|translin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 236
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 729 EHGSNRNFQDKEHTRTLALQQLSESVMDALSSLVGAQTAARGAHKLFHTLQHTTHN 784
E N N Q+KEH TL + E +++AL + ++ RG +L + +N
Sbjct: 45 EQSRNENLQEKEHGLTLEDLENQEEILEALEII---KSKTRGLAELASNFPYYKYN 97
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 28.3 bits (60), Expect = 4.7
Identities = 28/126 (22%), Positives = 51/126 (40%), Gaps = 5/126 (3%)
Query: 496 WVLLRTLNEFQDLHRKLRPLCSELKNLELPSNSFKFLFGKNDKNSLDKAKTLIQKYLEFV 555
WV L + +D R + L + + + + KFL N KA ++ L+ V
Sbjct: 343 WVSLIKSRKQKDKKRLISLLDTSISQIRVTHEQAKFLLSVIPVNQDFKALQSYRRILDSV 402
Query: 556 LEDDRLNQSEALYTFLNPSSEYLKQEDMPKKNKFSLSTLFKSASSEATNRSSQEKEAFNH 615
++ +R + L +N + K KK++ L K S + S ++ A+
Sbjct: 403 IQPER--KEGKLDNLINTLQDKKKSSTFSKKDR---EVLLKKISEIDSQTSFEQCLAYAD 457
Query: 616 MSADED 621
+AD D
Sbjct: 458 SAADLD 463
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 28.3 bits (60), Expect = 4.7
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 560 RLNQSEALYTFLNPSSEYLKQEDMPKKNKFSLSTLFKSAS----SEATNRSSQEKE 611
RLN EA Y+ + Y K E+ +NK ++ T AS + A N S E E
Sbjct: 155 RLNVEEAFYSLVRTIRRYNKSEEKGFQNKQAVQTAQVPASTAKRASAVNNSKTEDE 210
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 27.9 bits (59), Expect = 6.2
Identities = 23/99 (23%), Positives = 47/99 (47%), Gaps = 3/99 (3%)
Query: 255 TSVEDLRHSPRSSW-HQLGAEIFYTYIRSPSAEIKVDKDTRKRMESFLLGDKGPDVFYEV 313
+S E L++ +S+ H+ E + + S E++ K +++++ L+ + YE
Sbjct: 497 SSREQLQYVSKSNQEHKKEVEALQLQLVNSSTELESVKSENEKLKNELVLEIEKRKKYET 556
Query: 314 QETVLDTIQDKYYHSFLMSEEYKALIAEL--ATEENSKD 350
E + T+ + S+EY A + E TE N+K+
Sbjct: 557 NEAKITTVATDLSQYYRESKEYIASLYEKLDRTERNNKE 595
>SPAC16E8.07c |vph1||V-type ATPase subunit a|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 805
Score = 27.9 bits (59), Expect = 6.2
Identities = 21/144 (14%), Positives = 69/144 (47%), Gaps = 4/144 (2%)
Query: 93 QKIIQYLEAQKEVNAMHIRTHEYAKTFEDYIRLINSCNNVDTLKRLRYDIVTQIMQATTL 152
+++++YL ++ ++N +H+ H ++E + + ++ + RL V Q+++++ L
Sbjct: 37 ERLLRYLHSEIDLNGIHVPDHNLPPSYESVLESSTIEDIIERITRLEAR-VRQLVESSQL 95
Query: 153 QNVKRAKGIDL-DAIEKSNTQHNISRQQITDAKKLQRYINQLTIAKAECETALRKMGWD- 210
+ + ++ + + K++ + S + D + + + + + L + +
Sbjct: 96 LEARYLQQLEFANVLTKADAFFSKSGNTV-DPLRNNYETSSIFSGEDDTTAPLIENALEL 154
Query: 211 GAFPTFETDSKTLPLHKVMDSVTG 234
G TF+++ + ++ +D V+G
Sbjct: 155 GTTGTFDSEETSPQMNTTLDFVSG 178
>SPBC577.06c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1877
Score = 27.9 bits (59), Expect = 6.2
Identities = 27/124 (21%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Query: 68 LMREILACKI--LQPAIDLVTEPDYINQKIIQYLEA------QKEVNAMHIRTHEYAKTF 119
L+ E L CK L ++ + +P + ++ Q + A V ++ + T
Sbjct: 726 LLLESLRCKSNKLSALVEYLLDPSLRDSQLPQSIRAIALYNLTSFVESLSKERRVASSTI 785
Query: 120 EDYIRLIN-SCNNVDTLKRLRYDIVTQIMQATTLQNVKRAKGIDLDAIEKSNTQHNISRQ 178
+++ +L+ CN VD +++L + + IM+ TL ++ K I +E S+ +
Sbjct: 786 DEFQKLLCLCCNRVDCVRQLALECMNYIME--TLPHLLGIKEILFSVLELSSLLWKARTE 843
Query: 179 QITD 182
+ TD
Sbjct: 844 ECTD 847
>SPAC23C11.16 |plo1||Polo kinase Plo1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 683
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/82 (21%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Query: 760 SLVGAQTAARGAHKLFHTLQHTTHNKQLFYVSLPRSTNTYLGIMIDSLYPFRFAGHLKLT 819
S +G + + F +++T N LF R+ + + + ++ F F H K+
Sbjct: 571 SYMGQNLSKAVQDESFEKPKNSTSNTMLFMQHYLRTRQAIMFRLSNGIFQFNFLDHRKVV 630
Query: 820 LSFLTPTKILIINAPATGVGSP 841
+S T KI++++ V P
Sbjct: 631 IS-STARKIIVLDKERERVELP 651
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.131 0.378
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,701,083
Number of Sequences: 5004
Number of extensions: 156377
Number of successful extensions: 535
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 523
Number of HSP's gapped (non-prelim): 24
length of query: 844
length of database: 2,362,478
effective HSP length: 79
effective length of query: 765
effective length of database: 1,967,162
effective search space: 1504878930
effective search space used: 1504878930
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 58 (27.5 bits)
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