GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000890-TA|BGIBMGA000890-PA|IPR000342|Regulator of G
protein signalling, IPR001683|Phox-like, IPR003114|PX-associated,
IPR013937|Sorting nexin, C-terminal
         (844 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    26   3.6  
AF071161-1|AAC79997.1|  218|Anopheles gambiae glutathione S-tran...    26   3.6  
EF519467-1|ABP73543.1|  165|Anopheles gambiae CTLMA2 protein.          25   6.2  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    25   8.3  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 26.2 bits (55), Expect = 3.6
 Identities = 43/200 (21%), Positives = 79/200 (39%), Gaps = 12/200 (6%)

Query: 345  EENSK--DTNVDRSPIEERQLSNXXXXXXXXXXGALHLTEHSTYARRKLDQLQERHNNKI 402
            EE+S+  +  ++  P  ERQ+ N               + ++  AR+     Q+++  + 
Sbjct: 1392 EESSRRAEEALNLVPNIERQIVNSRDLLQRAEEALYAASRNAEDARKNAQTAQDKYAEEA 1451

Query: 403  QALAALRASLKPESPALSMLANEVEKLAGEQMRLEAHLARTDTWAEHL-GRWRASVHSAD 461
              LA    ++K  + A     N    L  E  +L   LA+TD   E    + R  ++  +
Sbjct: 1452 SKLAE---NIKKRANATK---NTARDLHHEADQLNGRLAKTDNRLEEREAQIRKDLNLTN 1505

Query: 462  VIDESKPPQFVIVVHMAEKEDSNSGDRPEQITTGWVLLRTL--NEFQDLHRKLRPLCSEL 519
               E K  Q  +  + A+ +   +      I +    LR +  N   DL R+L     EL
Sbjct: 1506 EAKE-KVGQAQLNSNEAKSQVDKAMREVSLIMSELANLREIDVNSLDDLERRLSAAEKEL 1564

Query: 520  KNLELPSNSFKFLFGKNDKN 539
            ++ +L       +  KN +N
Sbjct: 1565 EDAQLTKRLSSLVEAKNIQN 1584


>AF071161-1|AAC79997.1|  218|Anopheles gambiae glutathione
           S-transferase D7 protein.
          Length = 218

 Score = 26.2 bits (55), Expect = 3.6
 Identities = 12/44 (27%), Positives = 21/44 (47%)

Query: 669 DMRGVFRWLRKTLVTFVQITYGRTINRQIKDTISWLFSEQMLHY 712
           D  G+  W  + ++ ++   YG+  N   KD  S    +Q LH+
Sbjct: 58  DDHGLVLWESRVILAYLVSAYGKDENLYPKDFRSRAIVDQRLHF 101


>EF519467-1|ABP73543.1|  165|Anopheles gambiae CTLMA2 protein.
          Length = 165

 Score = 25.4 bits (53), Expect = 6.2
 Identities = 18/72 (25%), Positives = 29/72 (40%), Gaps = 3/72 (4%)

Query: 608 QEKEAFNHMSADEDEISM--YLDGNGAEAGNKTMTNSLRG-ASAIAEERDSTAEPLYALL 664
           +EKE F  +S   D +    Y    G E       +  R     IAEE   + +  Y + 
Sbjct: 33  EEKEYFIPISRTSDWLGAVAYCHSVGMELAEVLNEDGARAMGEVIAEEESDSDDEFYWIG 92

Query: 665 SEVFDMRGVFRW 676
           +    ++G +RW
Sbjct: 93  ANDLGVQGTYRW 104


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 25.0 bits (52), Expect = 8.3
 Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 5/91 (5%)

Query: 538 KNSLDKAKTLIQKYLEFVLEDDRLNQSEALYTFLNPSSEYLKQEDMPKKNKFSLSTLFKS 597
           KNSLDK    +Q  +    E     + + L          L+ +D+PKKNK  +      
Sbjct: 379 KNSLDKFAK-VQANMRATNE----RRKKTLEQIAAEEKRLLELQDVPKKNKKEIEESEAK 433

Query: 598 ASSEATNRSSQEKEAFNHMSADEDEISMYLD 628
             S    ++  E +   +++  +DE  + L+
Sbjct: 434 IESLTRQKTEVEAKLTANLATLKDETKVLLE 464


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.131    0.378 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 800,992
Number of Sequences: 2123
Number of extensions: 32684
Number of successful extensions: 140
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 137
Number of HSP's gapped (non-prelim): 6
length of query: 844
length of database: 516,269
effective HSP length: 70
effective length of query: 774
effective length of database: 367,659
effective search space: 284568066
effective search space used: 284568066
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 52 (25.0 bits)